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KJC3_003237-T1, KJC3_003237-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003237-T1
Unique NameKJC3_003237-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1379105..1381194-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003237-T1 ID=KJC3_003237-T1|Name=KJC3_003237-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2090bp|location=Sequence derived from alignment at ch3:1379105..1381194- (Aspergillus niger KJC3)
GCGCATGATCTTCAGTCCACACCTATGGGCTGAAGAGTCTTGCTACAAAC
GTCGCTAGGAGCTTGTGACCAAATGTGATGCTCGCTGAGCTTGCTCATCA
GACATCGATATAGCACTAAGCCCCTCCATTTAGCTTGCTTGCAGTTCGGC
CGTCATCACAATGGAATCCCTAGCGGATACGCCATGGGACGTGACGATCT
CTGGCACTGGACTGGCCCAGTCACTTCTAGCTCTGTGAGCTACCTTCAGT
CAATGCTGTATTTGCTTACAGCTAACGTCTCTTGCCAGGGCCCTTTCCAG
GTCAGGTAAGAACGTTCTCCATGTTGACAGAAATCCATACTACGGTGGTC
CTGAGGCAGCTTTTAGCCTGCAGGAAGCCGAGGAGTGGGCTGCTAAAGTG
AACGAGGGTAGGAGCTCCCCAGTCTAAGCGACCCCATAGCCCCTGCTGAC
TCGTGTGGGTGAGCTAGACACCGGGGAGCTCCCATTCGAACATGCTAGCG
TCTACTCCGAAAGCTCCGGGGATTCCACTGGTCAGCTTGCGTCCTCTCGA
GCATATACCCTCTCCTTGTCGCCGCAATTGATCTACTCCCGATCACAACT
CTTGCCTACCTTGGTTTCCTCCAAGGTCTACCGGCAATTGGAGTTCCAGG
CTGTGGGCAGCTGGTGGATTTACAATCCTGAGACTGACGATAGTAGTCAT
CTTTATCGTGTCCCAGGCAGTCGGGAGGATGTCTTTGCGGATGATGTGAT
CAGTATGAAGTCGAAGAGGACTCTGATGAGGTTTCTCCGTCATCTTGGTC
AGGCTCAGGAGAGTGGAAATGTGTCGGAAGGACCGGATCCGTCCCCGGAA
GAGGAGGGTCTTGCTGTACCCTTCTCTGAGTATCTGGCCACGAAGTTTCA
GGTGCCCACTGAGCTTCATGGTCCCTTGCTCTCACTTTGCCTATCACAGG
CTGCTCCTCAACAGACATCGGCCCAGTATGCCCTCCCACGCATCAAGAGA
CATTTGTCATCTATTGGTGTGTTTGGTCCTGGCTTTGGGGCTCTCTCGGT
CAAATGGGGCGGCGGCTCTGAGATCTCTCAGGTAGGCTGTCGCGCCCTTG
CCGTAGGGGGTGGTGTATATGTCCTCAACACTGGCGTCAAGTCAGTCGGA
TCTTCAATAGAACAGGATTCCGATGACCAGTCGCGCATACAGATTCAACT
GACTAATGATGAATCGGTCAAGTCCCGGTACATCGTTGGCTCGAATTGGG
ATCTTCCCGCTGCAACTCGCCCTTCTCTGGAGTGTGACAAAGTGGCACGT
TCCATCTCCATCGTTTCATCTTCCCTTGCGAACCTCTTCCCCGTTACTGC
AGAGGGTGGACCAGTCCCTGTTGGAGCGGTAGTGGTATTCCCGGGAAGCT
CTGTTGGCGGTGCTGATGGTGCACCTCCGGTGTACACTATAGTCCACTCC
AGCGAAACGGGCGAGTGTCCTACTGGACAATGTAAGTCATTACTTTTCCT
TGTGCATCCCCTCCTCCCCTTGCTCATATGATGACTTTTCTTCAAAAACT
TATCTACATTGCCTGATACATCATTGATGAAAACTTCTACGAACTGATCA
TGAGCTTTCCTTTTTTTTTCAAATCATGCAAGTTGCATTGTCCTGTGACA
TGTTGCTAACTTTATCAGGCGTGGTGTATAGTAGTGTCAGCATACCCGGT
TCAGAAGGACAGTCGATGATTGAAGCTGCTCTGCAAAAACTTTTCCAGTC
GGCTGCCGATCCGAATACGAAAGTCCTGTGGTCCCTGCGTTATACGCAGC
TGGGCCAAGGCGCCTCCCACAACGCTGATCTAAGCTGTCCGTCGAAGAAC
GTCATATGCCTCCCGCCTGTCAGCCTCGACCTTGCTTTTGATGACACCTT
GATCGATACGGTCAAGAAAGCTTGGGAGCTGATCATGGGGGAGGAGGCTG
CTCAGCACGAATTTATGAAGTTCGAGGATCGAGAGGGCGCCTATGAGGAA
TGATGTGGGTTGTAGAGCAACTCGCATGTAAATATGCTGTAGTAATGATT
TAGATAAGACTTTCACAATGATAACCGATTACCAAGGCCA
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Coding sequence (CDS) from alignment at ch3:1379105..1381194-

>KJC3_003237-T1 ID=KJC3_003237-T1|Name=KJC3_003237-T1|organism=Aspergillus niger KJC3|type=CDS|length=6168bp|location=Sequence derived from alignment at ch3:1379105..1381194- (Aspergillus niger KJC3)
GCGTGGTGTATAGTAGTGTCAGCATACCCGGTTCAGAAGGACAGTCGATG
ATTGAAGCTGCTCTGCAAAAACTTTTCCAGTCGGCTGCCGATCCGAATAC
GAAAGTCCTGTGGTCCCTGCGTTATACGCAGCTGGGCCAAGGCGCCTCCC
ACAACGCTGATCTAAGCTGTCCGTCGAAGAACGTCATATGCCTCCCGCCT
GTCAGCCTCGACCTTGCTTTTGATGACACCTTGATCGATACGGTCAAGAA
AGCTTGGGAGCTGATCATGGGGGAGGAGGCTGCTCAGCACGAATTTATGA
AGTTCGAGGATCGAGAGGGCGCCTATGAGGAATGAACACCGGGGAGCTCC
CATTCGAACATGCTAGCGTCTACTCCGAAAGCTCCGGGGATTCCACTGGT
CAGCTTGCGTCCTCTCGAGCATATACCCTCTCCTTGTCGCCGCAATTGAT
CTACTCCCGATCACAACTCTTGCCTACCTTGGTTTCCTCCAAGGTCTACC
GGCAATTGGAGTTCCAGGCTGTGGGCAGCTGGTGGATTTACAATCCTGAG
ACTGACGATAGTAGTCATCTTTATCGTGTCCCAGGCAGTCGGGAGGATGT
CTTTGCGGATGATGTGATCAGTATGAAGTCGAAGAGGACTCTGATGAGGT
TTCTCCGTCATCTTGGTCAGGCTCAGGAGAGTGGAAATGTGTCGGAAGGA
CCGGATCCGTCCCCGGAAGAGGAGGGTCTTGCTGTACCCTTCTCTGAGTA
TCTGGCCACGAAGTTTCAGGTGCCCACTGAGCTTCATGGTCCCTTGCTCT
CACTTTGCCTATCACAGGCTGCTCCTCAACAGACATCGGCCCAGTATGCC
CTCCCACGCATCAAGAGACATTTGTCATCTATTGGTGTGTTTGGTCCTGG
CTTTGGGGCTCTCTCGGTCAAATGGGGCGGCGGCTCTGAGATCTCTCAGG
TAGGCTGTCGCGCCCTTGCCGTAGGGGGTGGTGTATATGTCCTCAACACT
GGCGTCAAGTCAGTCGGATCTTCAATAGAACAGGATTCCGATGACCAGTC
GCGCATACAGATTCAACTGACTAATGATGAATCGGTCAAGTCCCGGTACA
TCGTTGGCTCGAATTGGGATCTTCCCGCTGCAACTCGCCCTTCTCTGGAG
TGTGACAAAGTGGCACGTTCCATCTCCATCGTTTCATCTTCCCTTGCGAA
CCTCTTCCCCGTTACTGCAGAGGGTGGACCAGTCCCTGTTGGAGCGGTAG
TGGTATTCCCGGGAAGCTCTGTTGGCGGTGCTGATGGTGCACCTCCGGTG
TACACTATAGTCCACTCCAGCGAAACGGGCGAGTGTCCTACTGGACAATG
GCCCTTTCCAGGTCAGGTAAGAACGTTCTCCATGTTGACAGAAATCCATA
CTACGGTGGTCCTGAGGCAGCTTTTAGCCTGCAGGAAGCCGAGGAGTGGG
CTGCTAAAGTGAACGAGGATGGAATCCCTAGCGGATACGCCATGGGACGT
GACGATCTCTGGCACTGGACTGGCCCAGTCACTTCTAGCTCTGCGTGGTG
TATAGTAGTGTCAGCATACCCGGTTCAGAAGGACAGTCGATGATTGAAGC
TGCTCTGCAAAAACTTTTCCAGTCGGCTGCCGATCCGAATACGAAAGTCC
TGTGGTCCCTGCGTTATACGCAGCTGGGCCAAGGCGCCTCCCACAACGCT
GATCTAAGCTGTCCGTCGAAGAACGTCATATGCCTCCCGCCTGTCAGCCT
CGACCTTGCTTTTGATGACACCTTGATCGATACGGTCAAGAAAGCTTGGG
AGCTGATCATGGGGGAGGAGGCTGCTCAGCACGAATTTATGAAGTTCGAG
GATCGAGAGGGCGCCTATGAGGAATGAACACCGGGGAGCTCCCATTCGAA
CATGCTAGCGTCTACTCCGAAAGCTCCGGGGATTCCACTGGTCAGCTTGC
GTCCTCTCGAGCATATACCCTCTCCTTGTCGCCGCAATTGATCTACTCCC
GATCACAACTCTTGCCTACCTTGGTTTCCTCCAAGGTCTACCGGCAATTG
GAGTTCCAGGCTGTGGGCAGCTGGTGGATTTACAATCCTGAGACTGACGA
TAGTAGTCATCTTTATCGTGTCCCAGGCAGTCGGGAGGATGTCTTTGCGG
ATGATGTGATCAGTATGAAGTCGAAGAGGACTCTGATGAGGTTTCTCCGT
CATCTTGGTCAGGCTCAGGAGAGTGGAAATGTGTCGGAAGGACCGGATCC
GTCCCCGGAAGAGGAGGGTCTTGCTGTACCCTTCTCTGAGTATCTGGCCA
CGAAGTTTCAGGTGCCCACTGAGCTTCATGGTCCCTTGCTCTCACTTTGC
CTATCACAGGCTGCTCCTCAACAGACATCGGCCCAGTATGCCCTCCCACG
CATCAAGAGACATTTGTCATCTATTGGTGTGTTTGGTCCTGGCTTTGGGG
CTCTCTCGGTCAAATGGGGCGGCGGCTCTGAGATCTCTCAGGTAGGCTGT
CGCGCCCTTGCCGTAGGGGGTGGTGTATATGTCCTCAACACTGGCGTCAA
GTCAGTCGGATCTTCAATAGAACAGGATTCCGATGACCAGTCGCGCATAC
AGATTCAACTGACTAATGATGAATCGGTCAAGTCCCGGTACATCGTTGGC
TCGAATTGGGATCTTCCCGCTGCAACTCGCCCTTCTCTGGAGTGTGACAA
AGTGGCACGTTCCATCTCCATCGTTTCATCTTCCCTTGCGAACCTCTTCC
CCGTTACTGCAGAGGGTGGACCAGTCCCTGTTGGAGCGGTAGTGGTATTC
CCGGGAAGCTCTGTTGGCGGTGCTGATGGTGCACCTCCGGTGTACACTAT
AGTCCACTCCAGCGAAACGGGCGAGTGTCCTACTGGACAATGGCCCTTTC
CAGGTCAGGTAAGAACGTTCTCCATGTTGACAGAAATCCATACTACGGTG
GTCCTGAGGCAGCTTTTAGCCTGCAGGAAGCCGAGGAGTGGGCTGCTAAA
GTGAACGAGGATGGAATCCCTAGCGGATACGCCATGGGACGTGACGATCT
CTGGCACTGGACTGGCCCAGTCACTTCTAGCTCTGCGTGGTGTATAGTAG
TGTCAGCATACCCGGTTCAGAAGGACAGTCGATGATTGAAGCTGCTCTGC
AAAAACTTTTCCAGTCGGCTGCCGATCCGAATACGAAAGTCCTGTGGTCC
CTGCGTTATACGCAGCTGGGCCAAGGCGCCTCCCACAACGCTGATCTAAG
CTGTCCGTCGAAGAACGTCATATGCCTCCCGCCTGTCAGCCTCGACCTTG
CTTTTGATGACACCTTGATCGATACGGTCAAGAAAGCTTGGGAGCTGATC
ATGGGGGAGGAGGCTGCTCAGCACGAATTTATGAAGTTCGAGGATCGAGA
GGGCGCCTATGAGGAATGAACACCGGGGAGCTCCCATTCGAACATGCTAG
CGTCTACTCCGAAAGCTCCGGGGATTCCACTGGTCAGCTTGCGTCCTCTC
GAGCATATACCCTCTCCTTGTCGCCGCAATTGATCTACTCCCGATCACAA
CTCTTGCCTACCTTGGTTTCCTCCAAGGTCTACCGGCAATTGGAGTTCCA
GGCTGTGGGCAGCTGGTGGATTTACAATCCTGAGACTGACGATAGTAGTC
ATCTTTATCGTGTCCCAGGCAGTCGGGAGGATGTCTTTGCGGATGATGTG
ATCAGTATGAAGTCGAAGAGGACTCTGATGAGGTTTCTCCGTCATCTTGG
TCAGGCTCAGGAGAGTGGAAATGTGTCGGAAGGACCGGATCCGTCCCCGG
AAGAGGAGGGTCTTGCTGTACCCTTCTCTGAGTATCTGGCCACGAAGTTT
CAGGTGCCCACTGAGCTTCATGGTCCCTTGCTCTCACTTTGCCTATCACA
GGCTGCTCCTCAACAGACATCGGCCCAGTATGCCCTCCCACGCATCAAGA
GACATTTGTCATCTATTGGTGTGTTTGGTCCTGGCTTTGGGGCTCTCTCG
GTCAAATGGGGCGGCGGCTCTGAGATCTCTCAGGTAGGCTGTCGCGCCCT
TGCCGTAGGGGGTGGTGTATATGTCCTCAACACTGGCGTCAAGTCAGTCG
GATCTTCAATAGAACAGGATTCCGATGACCAGTCGCGCATACAGATTCAA
CTGACTAATGATGAATCGGTCAAGTCCCGGTACATCGTTGGCTCGAATTG
GGATCTTCCCGCTGCAACTCGCCCTTCTCTGGAGTGTGACAAAGTGGCAC
GTTCCATCTCCATCGTTTCATCTTCCCTTGCGAACCTCTTCCCCGTTACT
GCAGAGGGTGGACCAGTCCCTGTTGGAGCGGTAGTGGTATTCCCGGGAAG
CTCTGTTGGCGGTGCTGATGGTGCACCTCCGGTGTACACTATAGTCCACT
CCAGCGAAACGGGCGAGTGTCCTACTGGACAATGGCCCTTTCCAGGTCAG
GTAAGAACGTTCTCCATGTTGACAGAAATCCATACTACGGTGGTCCTGAG
GCAGCTTTTAGCCTGCAGGAAGCCGAGGAGTGGGCTGCTAAAGTGAACGA
GGATGGAATCCCTAGCGGATACGCCATGGGACGTGACGATCTCTGGCACT
GGACTGGCCCAGTCACTTCTAGCTCTGCGTGGTGTATAGTAGTGTCAGCA
TACCCGGTTCAGAAGGACAGTCGATGATTGAAGCTGCTCTGCAAAAACTT
TTCCAGTCGGCTGCCGATCCGAATACGAAAGTCCTGTGGTCCCTGCGTTA
TACGCAGCTGGGCCAAGGCGCCTCCCACAACGCTGATCTAAGCTGTCCGT
CGAAGAACGTCATATGCCTCCCGCCTGTCAGCCTCGACCTTGCTTTTGAT
GACACCTTGATCGATACGGTCAAGAAAGCTTGGGAGCTGATCATGGGGGA
GGAGGCTGCTCAGCACGAATTTATGAAGTTCGAGGATCGAGAGGGCGCCT
ATGAGGAATGAACACCGGGGAGCTCCCATTCGAACATGCTAGCGTCTACT
CCGAAAGCTCCGGGGATTCCACTGGTCAGCTTGCGTCCTCTCGAGCATAT
ACCCTCTCCTTGTCGCCGCAATTGATCTACTCCCGATCACAACTCTTGCC
TACCTTGGTTTCCTCCAAGGTCTACCGGCAATTGGAGTTCCAGGCTGTGG
GCAGCTGGTGGATTTACAATCCTGAGACTGACGATAGTAGTCATCTTTAT
CGTGTCCCAGGCAGTCGGGAGGATGTCTTTGCGGATGATGTGATCAGTAT
GAAGTCGAAGAGGACTCTGATGAGGTTTCTCCGTCATCTTGGTCAGGCTC
AGGAGAGTGGAAATGTGTCGGAAGGACCGGATCCGTCCCCGGAAGAGGAG
GGTCTTGCTGTACCCTTCTCTGAGTATCTGGCCACGAAGTTTCAGGTGCC
CACTGAGCTTCATGGTCCCTTGCTCTCACTTTGCCTATCACAGGCTGCTC
CTCAACAGACATCGGCCCAGTATGCCCTCCCACGCATCAAGAGACATTTG
TCATCTATTGGTGTGTTTGGTCCTGGCTTTGGGGCTCTCTCGGTCAAATG
GGGCGGCGGCTCTGAGATCTCTCAGGTAGGCTGTCGCGCCCTTGCCGTAG
GGGGTGGTGTATATGTCCTCAACACTGGCGTCAAGTCAGTCGGATCTTCA
ATAGAACAGGATTCCGATGACCAGTCGCGCATACAGATTCAACTGACTAA
TGATGAATCGGTCAAGTCCCGGTACATCGTTGGCTCGAATTGGGATCTTC
CCGCTGCAACTCGCCCTTCTCTGGAGTGTGACAAAGTGGCACGTTCCATC
TCCATCGTTTCATCTTCCCTTGCGAACCTCTTCCCCGTTACTGCAGAGGG
TGGACCAGTCCCTGTTGGAGCGGTAGTGGTATTCCCGGGAAGCTCTGTTG
GCGGTGCTGATGGTGCACCTCCGGTGTACACTATAGTCCACTCCAGCGAA
ACGGGCGAGTGTCCTACTGGACAATGGCCCTTTCCAGGTCAGGTAAGAAC
GTTCTCCATGTTGACAGAAATCCATACTACGGTGGTCCTGAGGCAGCTTT
TAGCCTGCAGGAAGCCGAGGAGTGGGCTGCTAAAGTGAACGAGGATGGAA
TCCCTAGCGGATACGCCATGGGACGTGACGATCTCTGGCACTGGACTGGC
CCAGTCACTTCTAGCTCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005092GDP-dissociation inhibitor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003237KJC3_003237Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003237-T1KJC3_003237-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003237-T1.cdsKJC3_003237-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003237-T1.utr3p1KJC3_003237-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003237-T1.exon4KJC3_003237-T1.exon4Aspergillus niger KJC3exon
KJC3_003237-T1.exon3KJC3_003237-T1.exon3Aspergillus niger KJC3exon
KJC3_003237-T1.exon2KJC3_003237-T1.exon2Aspergillus niger KJC3exon
KJC3_003237-T1.exon1KJC3_003237-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003237-T1.utr5p1KJC3_003237-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR017230
DBxrefInterPro:IPR018203
DBxrefPFAM:PF00996
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1379105..1381194 -
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