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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1379105..1381194- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003237-T2 ID=KJC3_003237-T2|Name=KJC3_003237-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2090bp|location=Sequence derived from alignment at ch3:1379105..1381194- (Aspergillus niger KJC3)
GCGCATGATCTTCAGTCCACACCTATGGGCTGAAGAGTCTTGCTACAAAC
GTCGCTAGGAGCTTGTGACCAAATGTGATGCTCGCTGAGCTTGCTCATCA
GACATCGATATAGCACTAAGCCCCTCCATTTAGCTTGCTTGCAGTTCGGC
CGTCATCACAATGGAATCCCTAGCGGATACGCCATGGGACGTGACGATCT
CTGGCACTGGACTGGCCCAGTCACTTCTAGCTCTGTGAGCTACCTTCAGT
CAATGCTGTATTTGCTTACAGCTAACGTCTCTTGCCAGGGCCCTTTCCAG
GTCAGGTAAGAACGTTCTCCATGTTGACAGAAATCCATACTACGGTGGTC
CTGAGGCAGCTTTTAGCCTGCAGGAAGCCGAGGAGTGGGCTGCTAAAGTG
AACGAGGGTAGGAGCTCCCCAGTCTAAGCGACCCCATAGCCCCTGCTGAC
TCGTGTGGGTGAGCTAGACACCGGGGAGCTCCCATTCGAACATGCTAGCG
TCTACTCCGAAAGCTCCGGGGATTCCACTGGTCAGCTTGCGTCCTCTCGA
GCATATACCCTCTCCTTGTCGCCGCAATTGATCTACTCCCGATCACAACT
CTTGCCTACCTTGGTTTCCTCCAAGGTCTACCGGCAATTGGAGTTCCAGG
CTGTGGGCAGCTGGTGGATTTACAATCCTGAGACTGACGATAGTAGTCAT
CTTTATCGTGTCCCAGGCAGTCGGGAGGATGTCTTTGCGGATGATGTGAT
CAGTATGAAGTCGAAGAGGACTCTGATGAGGTTTCTCCGTCATCTTGGTC
AGGCTCAGGAGAGTGGAAATGTGTCGGAAGGACCGGATCCGTCCCCGGAA
GAGGAGGGTCTTGCTGTACCCTTCTCTGAGTATCTGGCCACGAAGTTTCA
GGTGCCCACTGAGCTTCATGGTCCCTTGCTCTCACTTTGCCTATCACAGG
CTGCTCCTCAACAGACATCGGCCCAGTATGCCCTCCCACGCATCAAGAGA
CATTTGTCATCTATTGGTGTGTTTGGTCCTGGCTTTGGGGCTCTCTCGGT
CAAATGGGGCGGCGGCTCTGAGATCTCTCAGGTAGGCTGTCGCGCCCTTG
CCGTAGGGGGTGGTGTATATGTCCTCAACACTGGCGTCAAGTCAGTCGGA
TCTTCAATAGAACAGGATTCCGATGACCAGTCGCGCATACAGATTCAACT
GACTAATGATGAATCGGTCAAGTCCCGGTACATCGTTGGCTCGAATTGGG
ATCTTCCCGCTGCAACTCGCCCTTCTCTGGAGTGTGACAAAGTGGCACGT
TCCATCTCCATCGTTTCATCTTCCCTTGCGAACCTCTTCCCCGTTACTGC
AGAGGGTGGACCAGTCCCTGTTGGAGCGGTAGTGGTATTCCCGGGAAGCT
CTGTTGGCGGTGCTGATGGTGCACCTCCGGTGTACACTATAGTCCACTCC
AGCGAAACGGGCGAGTGTCCTACTGGACAATGTAAGTCATTACTTTTCCT
TGTGCATCCCCTCCTCCCCTTGCTCATATGATGACTTTTCTTCAAAAACT
TATCTACATTGCCTGATACATCATTGATGAAAACTTCTACGAACTGATCA
TGAGCTTTCCTTTTTTTTTCAAATCATGCAAGTTGCATTGTCCTGTGACA
TGTTGCTAACTTTATCAGGCGTGGTGTATAGTAGTGTCAGCATACCCGGT
TCAGAAGGACAGTCGATGATTGAAGCTGCTCTGCAAAAACTTTTCCAGTC
GGCTGCCGATCCGAATACGAAAGTCCTGTGGTCCCTGCGTTATACGCAGC
TGGGCCAAGGCGCCTCCCACAACGCTGATCTAAGCTGTCCGTCGAAGAAC
GTCATATGCCTCCCGCCTGTCAGCCTCGACCTTGCTTTTGATGACACCTT
GATCGATACGGTCAAGAAAGCTTGGGAGCTGATCATGGGGGAGGAGGCTG
CTCAGCACGAATTTATGAAGTTCGAGGATCGAGAGGGCGCCTATGAGGAA
TGATGTGGGTTGTAGAGCAACTCGCATGTAAATATGCTGTAGTAATGATT
TAGATAAGACTTTCACAATGATAACCGATTACCAAGGCCA back to topCoding sequence (CDS) from alignment at ch3:1379105..1381194- >KJC3_003237-T2 ID=KJC3_003237-T2|Name=KJC3_003237-T2|organism=Aspergillus niger KJC3|type=CDS|length=7290bp|location=Sequence derived from alignment at ch3:1379105..1381194- (Aspergillus niger KJC3)
GCGTGGTGTATAGTAGTGTCAGCATACCCGGTTCAGAAGGACAGTCGATG
ATTGAAGCTGCTCTGCAAAAACTTTTCCAGTCGGCTGCCGATCCGAATAC
GAAAGTCCTGTGGTCCCTGCGTTATACGCAGCTGGGCCAAGGCGCCTCCC
ACAACGCTGATCTAAGCTGTCCGTCGAAGAACGTCATATGCCTCCCGCCT
GTCAGCCTCGACCTTGCTTTTGATGACACCTTGATCGATACGGTCAAGAA
AGCTTGGGAGCTGATCATGGGGGAGGAGGCTGCTCAGCACGAATTTATGA
AGTTCGAGGATCGAGAGGGCGCCTATGAGGAATGAACACCGGGGAGCTCC
CATTCGAACATGCTAGCGTCTACTCCGAAAGCTCCGGGGATTCCACTGGT
CAGCTTGCGTCCTCTCGAGCATATACCCTCTCCTTGTCGCCGCAATTGAT
CTACTCCCGATCACAACTCTTGCCTACCTTGGTTTCCTCCAAGGTCTACC
GGCAATTGGAGTTCCAGGCTGTGGGCAGCTGGTGGATTTACAATCCTGAG
ACTGACGATAGTAGTCATCTTTATCGTGTCCCAGGCAGTCGGGAGGATGT
CTTTGCGGATGATGTGATCAGTATGAAGTCGAAGAGGACTCTGATGAGGT
TTCTCCGTCATCTTGGTCAGGCTCAGGAGAGTGGAAATGTGTCGGAAGGA
CCGGATCCGTCCCCGGAAGAGGAGGGTCTTGCTGTACCCTTCTCTGAGTA
TCTGGCCACGAAGTTTCAGGTGCCCACTGAGCTTCATGGTCCCTTGCTCT
CACTTTGCCTATCACAGGCTGCTCCTCAACAGACATCGGCCCAGTATGCC
CTCCCACGCATCAAGAGACATTTGTCATCTATTGGTGTGTTTGGTCCTGG
CTTTGGGGCTCTCTCGGTCAAATGGGGCGGCGGCTCTGAGATCTCTCAGG
TAGGCTGTCGCGCCCTTGCCGTAGGGGGTGGTGTATATGTCCTCAACACT
GGCGTCAAGTCAGTCGGATCTTCAATAGAACAGGATTCCGATGACCAGTC
GCGCATACAGATTCAACTGACTAATGATGAATCGGTCAAGTCCCGGTACA
TCGTTGGCTCGAATTGGGATCTTCCCGCTGCAACTCGCCCTTCTCTGGAG
TGTGACAAAGTGGCACGTTCCATCTCCATCGTTTCATCTTCCCTTGCGAA
CCTCTTCCCCGTTACTGCAGAGGGTGGACCAGTCCCTGTTGGAGCGGTAG
TGGTATTCCCGGGAAGCTCTGTTGGCGGTGCTGATGGTGCACCTCCGGTG
TACACTATAGTCCACTCCAGCGAAACGGGCGAGTGTCCTACTGGACAATC
CTGCAGGAAGCCGAGGAGTGGGCTGCTAAAGTGAACGAGGGGCCCTTTCC
AGGTCAGATGGGACGTGACGATCTCTGGCACTGGACTGGCCCAGTCACTT
CTAGCTCTGCGTGGTGTATAGTAGTGTCAGCATACCCGGTTCAGAAGGAC
AGTCGATGATTGAAGCTGCTCTGCAAAAACTTTTCCAGTCGGCTGCCGAT
CCGAATACGAAAGTCCTGTGGTCCCTGCGTTATACGCAGCTGGGCCAAGG
CGCCTCCCACAACGCTGATCTAAGCTGTCCGTCGAAGAACGTCATATGCC
TCCCGCCTGTCAGCCTCGACCTTGCTTTTGATGACACCTTGATCGATACG
GTCAAGAAAGCTTGGGAGCTGATCATGGGGGAGGAGGCTGCTCAGCACGA
ATTTATGAAGTTCGAGGATCGAGAGGGCGCCTATGAGGAATGAACACCGG
GGAGCTCCCATTCGAACATGCTAGCGTCTACTCCGAAAGCTCCGGGGATT
CCACTGGTCAGCTTGCGTCCTCTCGAGCATATACCCTCTCCTTGTCGCCG
CAATTGATCTACTCCCGATCACAACTCTTGCCTACCTTGGTTTCCTCCAA
GGTCTACCGGCAATTGGAGTTCCAGGCTGTGGGCAGCTGGTGGATTTACA
ATCCTGAGACTGACGATAGTAGTCATCTTTATCGTGTCCCAGGCAGTCGG
GAGGATGTCTTTGCGGATGATGTGATCAGTATGAAGTCGAAGAGGACTCT
GATGAGGTTTCTCCGTCATCTTGGTCAGGCTCAGGAGAGTGGAAATGTGT
CGGAAGGACCGGATCCGTCCCCGGAAGAGGAGGGTCTTGCTGTACCCTTC
TCTGAGTATCTGGCCACGAAGTTTCAGGTGCCCACTGAGCTTCATGGTCC
CTTGCTCTCACTTTGCCTATCACAGGCTGCTCCTCAACAGACATCGGCCC
AGTATGCCCTCCCACGCATCAAGAGACATTTGTCATCTATTGGTGTGTTT
GGTCCTGGCTTTGGGGCTCTCTCGGTCAAATGGGGCGGCGGCTCTGAGAT
CTCTCAGGTAGGCTGTCGCGCCCTTGCCGTAGGGGGTGGTGTATATGTCC
TCAACACTGGCGTCAAGTCAGTCGGATCTTCAATAGAACAGGATTCCGAT
GACCAGTCGCGCATACAGATTCAACTGACTAATGATGAATCGGTCAAGTC
CCGGTACATCGTTGGCTCGAATTGGGATCTTCCCGCTGCAACTCGCCCTT
CTCTGGAGTGTGACAAAGTGGCACGTTCCATCTCCATCGTTTCATCTTCC
CTTGCGAACCTCTTCCCCGTTACTGCAGAGGGTGGACCAGTCCCTGTTGG
AGCGGTAGTGGTATTCCCGGGAAGCTCTGTTGGCGGTGCTGATGGTGCAC
CTCCGGTGTACACTATAGTCCACTCCAGCGAAACGGGCGAGTGTCCTACT
GGACAATCCTGCAGGAAGCCGAGGAGTGGGCTGCTAAAGTGAACGAGGGG
CCCTTTCCAGGTCAGATGGGACGTGACGATCTCTGGCACTGGACTGGCCC
AGTCACTTCTAGCTCTGCGTGGTGTATAGTAGTGTCAGCATACCCGGTTC
AGAAGGACAGTCGATGATTGAAGCTGCTCTGCAAAAACTTTTCCAGTCGG
CTGCCGATCCGAATACGAAAGTCCTGTGGTCCCTGCGTTATACGCAGCTG
GGCCAAGGCGCCTCCCACAACGCTGATCTAAGCTGTCCGTCGAAGAACGT
CATATGCCTCCCGCCTGTCAGCCTCGACCTTGCTTTTGATGACACCTTGA
TCGATACGGTCAAGAAAGCTTGGGAGCTGATCATGGGGGAGGAGGCTGCT
CAGCACGAATTTATGAAGTTCGAGGATCGAGAGGGCGCCTATGAGGAATG
AACACCGGGGAGCTCCCATTCGAACATGCTAGCGTCTACTCCGAAAGCTC
CGGGGATTCCACTGGTCAGCTTGCGTCCTCTCGAGCATATACCCTCTCCT
TGTCGCCGCAATTGATCTACTCCCGATCACAACTCTTGCCTACCTTGGTT
TCCTCCAAGGTCTACCGGCAATTGGAGTTCCAGGCTGTGGGCAGCTGGTG
GATTTACAATCCTGAGACTGACGATAGTAGTCATCTTTATCGTGTCCCAG
GCAGTCGGGAGGATGTCTTTGCGGATGATGTGATCAGTATGAAGTCGAAG
AGGACTCTGATGAGGTTTCTCCGTCATCTTGGTCAGGCTCAGGAGAGTGG
AAATGTGTCGGAAGGACCGGATCCGTCCCCGGAAGAGGAGGGTCTTGCTG
TACCCTTCTCTGAGTATCTGGCCACGAAGTTTCAGGTGCCCACTGAGCTT
CATGGTCCCTTGCTCTCACTTTGCCTATCACAGGCTGCTCCTCAACAGAC
ATCGGCCCAGTATGCCCTCCCACGCATCAAGAGACATTTGTCATCTATTG
GTGTGTTTGGTCCTGGCTTTGGGGCTCTCTCGGTCAAATGGGGCGGCGGC
TCTGAGATCTCTCAGGTAGGCTGTCGCGCCCTTGCCGTAGGGGGTGGTGT
ATATGTCCTCAACACTGGCGTCAAGTCAGTCGGATCTTCAATAGAACAGG
ATTCCGATGACCAGTCGCGCATACAGATTCAACTGACTAATGATGAATCG
GTCAAGTCCCGGTACATCGTTGGCTCGAATTGGGATCTTCCCGCTGCAAC
TCGCCCTTCTCTGGAGTGTGACAAAGTGGCACGTTCCATCTCCATCGTTT
CATCTTCCCTTGCGAACCTCTTCCCCGTTACTGCAGAGGGTGGACCAGTC
CCTGTTGGAGCGGTAGTGGTATTCCCGGGAAGCTCTGTTGGCGGTGCTGA
TGGTGCACCTCCGGTGTACACTATAGTCCACTCCAGCGAAACGGGCGAGT
GTCCTACTGGACAATCCTGCAGGAAGCCGAGGAGTGGGCTGCTAAAGTGA
ACGAGGGGCCCTTTCCAGGTCAGATGGGACGTGACGATCTCTGGCACTGG
ACTGGCCCAGTCACTTCTAGCTCTGCGTGGTGTATAGTAGTGTCAGCATA
CCCGGTTCAGAAGGACAGTCGATGATTGAAGCTGCTCTGCAAAAACTTTT
CCAGTCGGCTGCCGATCCGAATACGAAAGTCCTGTGGTCCCTGCGTTATA
CGCAGCTGGGCCAAGGCGCCTCCCACAACGCTGATCTAAGCTGTCCGTCG
AAGAACGTCATATGCCTCCCGCCTGTCAGCCTCGACCTTGCTTTTGATGA
CACCTTGATCGATACGGTCAAGAAAGCTTGGGAGCTGATCATGGGGGAGG
AGGCTGCTCAGCACGAATTTATGAAGTTCGAGGATCGAGAGGGCGCCTAT
GAGGAATGAACACCGGGGAGCTCCCATTCGAACATGCTAGCGTCTACTCC
GAAAGCTCCGGGGATTCCACTGGTCAGCTTGCGTCCTCTCGAGCATATAC
CCTCTCCTTGTCGCCGCAATTGATCTACTCCCGATCACAACTCTTGCCTA
CCTTGGTTTCCTCCAAGGTCTACCGGCAATTGGAGTTCCAGGCTGTGGGC
AGCTGGTGGATTTACAATCCTGAGACTGACGATAGTAGTCATCTTTATCG
TGTCCCAGGCAGTCGGGAGGATGTCTTTGCGGATGATGTGATCAGTATGA
AGTCGAAGAGGACTCTGATGAGGTTTCTCCGTCATCTTGGTCAGGCTCAG
GAGAGTGGAAATGTGTCGGAAGGACCGGATCCGTCCCCGGAAGAGGAGGG
TCTTGCTGTACCCTTCTCTGAGTATCTGGCCACGAAGTTTCAGGTGCCCA
CTGAGCTTCATGGTCCCTTGCTCTCACTTTGCCTATCACAGGCTGCTCCT
CAACAGACATCGGCCCAGTATGCCCTCCCACGCATCAAGAGACATTTGTC
ATCTATTGGTGTGTTTGGTCCTGGCTTTGGGGCTCTCTCGGTCAAATGGG
GCGGCGGCTCTGAGATCTCTCAGGTAGGCTGTCGCGCCCTTGCCGTAGGG
GGTGGTGTATATGTCCTCAACACTGGCGTCAAGTCAGTCGGATCTTCAAT
AGAACAGGATTCCGATGACCAGTCGCGCATACAGATTCAACTGACTAATG
ATGAATCGGTCAAGTCCCGGTACATCGTTGGCTCGAATTGGGATCTTCCC
GCTGCAACTCGCCCTTCTCTGGAGTGTGACAAAGTGGCACGTTCCATCTC
CATCGTTTCATCTTCCCTTGCGAACCTCTTCCCCGTTACTGCAGAGGGTG
GACCAGTCCCTGTTGGAGCGGTAGTGGTATTCCCGGGAAGCTCTGTTGGC
GGTGCTGATGGTGCACCTCCGGTGTACACTATAGTCCACTCCAGCGAAAC
GGGCGAGTGTCCTACTGGACAATCCTGCAGGAAGCCGAGGAGTGGGCTGC
TAAAGTGAACGAGGGGCCCTTTCCAGGTCAGATGGGACGTGACGATCTCT
GGCACTGGACTGGCCCAGTCACTTCTAGCTCTGCGTGGTGTATAGTAGTG
TCAGCATACCCGGTTCAGAAGGACAGTCGATGATTGAAGCTGCTCTGCAA
AAACTTTTCCAGTCGGCTGCCGATCCGAATACGAAAGTCCTGTGGTCCCT
GCGTTATACGCAGCTGGGCCAAGGCGCCTCCCACAACGCTGATCTAAGCT
GTCCGTCGAAGAACGTCATATGCCTCCCGCCTGTCAGCCTCGACCTTGCT
TTTGATGACACCTTGATCGATACGGTCAAGAAAGCTTGGGAGCTGATCAT
GGGGGAGGAGGCTGCTCAGCACGAATTTATGAAGTTCGAGGATCGAGAGG
GCGCCTATGAGGAATGAACACCGGGGAGCTCCCATTCGAACATGCTAGCG
TCTACTCCGAAAGCTCCGGGGATTCCACTGGTCAGCTTGCGTCCTCTCGA
GCATATACCCTCTCCTTGTCGCCGCAATTGATCTACTCCCGATCACAACT
CTTGCCTACCTTGGTTTCCTCCAAGGTCTACCGGCAATTGGAGTTCCAGG
CTGTGGGCAGCTGGTGGATTTACAATCCTGAGACTGACGATAGTAGTCAT
CTTTATCGTGTCCCAGGCAGTCGGGAGGATGTCTTTGCGGATGATGTGAT
CAGTATGAAGTCGAAGAGGACTCTGATGAGGTTTCTCCGTCATCTTGGTC
AGGCTCAGGAGAGTGGAAATGTGTCGGAAGGACCGGATCCGTCCCCGGAA
GAGGAGGGTCTTGCTGTACCCTTCTCTGAGTATCTGGCCACGAAGTTTCA
GGTGCCCACTGAGCTTCATGGTCCCTTGCTCTCACTTTGCCTATCACAGG
CTGCTCCTCAACAGACATCGGCCCAGTATGCCCTCCCACGCATCAAGAGA
CATTTGTCATCTATTGGTGTGTTTGGTCCTGGCTTTGGGGCTCTCTCGGT
CAAATGGGGCGGCGGCTCTGAGATCTCTCAGGTAGGCTGTCGCGCCCTTG
CCGTAGGGGGTGGTGTATATGTCCTCAACACTGGCGTCAAGTCAGTCGGA
TCTTCAATAGAACAGGATTCCGATGACCAGTCGCGCATACAGATTCAACT
GACTAATGATGAATCGGTCAAGTCCCGGTACATCGTTGGCTCGAATTGGG
ATCTTCCCGCTGCAACTCGCCCTTCTCTGGAGTGTGACAAAGTGGCACGT
TCCATCTCCATCGTTTCATCTTCCCTTGCGAACCTCTTCCCCGTTACTGC
AGAGGGTGGACCAGTCCCTGTTGGAGCGGTAGTGGTATTCCCGGGAAGCT
CTGTTGGCGGTGCTGATGGTGCACCTCCGGTGTACACTATAGTCCACTCC
AGCGAAACGGGCGAGTGTCCTACTGGACAATCCTGCAGGAAGCCGAGGAG
TGGGCTGCTAAAGTGAACGAGGGGCCCTTTCCAGGTCAGATGGGACGTGA
CGATCTCTGGCACTGGACTGGCCCAGTCACTTCTAGCTCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007264 | small GTPase mediated signal transduction |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005092 | GDP-dissociation inhibitor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003237-T2.utr3p1 | KJC3_003237-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003237-T2.utr5p1 | KJC3_003237-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR017230 |
| DBxref | InterPro:IPR018203 |
| DBxref | PFAM:PF00996 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1379105..1381194 - |
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