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KJC3_003238-T1, KJC3_003238-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003238-T1
Unique NameKJC3_003238-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1381666..1382858-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003238-T1 ID=KJC3_003238-T1|Name=KJC3_003238-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1193bp|location=Sequence derived from alignment at ch3:1381666..1382858- (Aspergillus niger KJC3)
TCTTAACAAGTACCAGTAACAACCTGACACCTGTGTGCTAGATTCAAAAT
GGCGACTGACGTGGCTTTCGACACGAGCATGGTATGGATAACCAGAACGG
TTGCGTCAGCATAGCCCGCTAACCTGCCCAGGGCTCGTTCACAGTAGAGC
TCTACAATGCGCATGCGCCCAAGGTCAGTACCAAGATTCTAAGCTCATCC
CATCCTTGTTGTTATGCAATTTACTAACGTCTTTTGTACCAATTAGACGT
GTAAGAACTTCGCGACGCTTGCGCAACGAGGCTACTACAACAATGTCATC
TTCCACCGCATTATCCCCAACTTCATGGTACAAACTGGCGATCCTACCGG
CACTGGCAGAGGAGGAAGCTCTATCTACGGCGAGAAATTCGAGGACGAGA
TTAATCCCAACCTCAAGCATACCGGTGCTGGAATTCTGAGCATGGCAAAC
AGCGGGCCCAACACCAACGGCAGTCAGTTTTTCATTACGCTTGCCCCAAC
ACCATGGCTGGATGGAAAGCACACTATATTTGGTCGCGTCAAGAGTGGCA
TGAGGGTGATCCAGCGCATGGGACTGGTTAAGACAAATTCGGAAGACCGG
CCTGTGGACGAGGTGAAAATTCTCCGTGCCAGAATCGTGGAGGAGACGGG
AGACGAGTGAGGGGTCTTATAGCAGATGGTTATGGGTATTCATCCACAAG
GGCTACACAGCATCCTAGCAACGGCGGTCGTCAACCATGAATGATACGGG
CTGTTGGCATCGATGGCAGACAGGCAGACGTTGGACCGAAACCTCAGCAC
TGCACTCCAGGAGAGCAATGCAGAGCACGAGCAGTTGCGCGTTCATGATA
GCAGAGCCACGTCCGTCGGAACGTTACAACCGCCTTTGGTTGACGTCTGC
AACGCAAGAGCACAGCTTCATATAGAAACAGACTACAGATTAGAATAGGA
ATGTTTCACTACAAAACGAACCGCTTCCATCAGATGTTACCATCCGGAGC
AGCAGATACAGAGTGAATTGTCTATCTACCACTCCTATAGTACAAGACCA
GTGAAGGCTTGTACGAAGACGACGAAACTGCTACAAACAAGCAGTTTGCC
TGTGCAGAGCACTAGGAGTGGTGTGAAGAAGGAAAGAAGCTCTGATTGTG
GGCGAAATCCTCCTTAAGCGGCTCCCGTTAGTCGAGTCTAGCT
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Coding sequence (CDS) from alignment at ch3:1381666..1382858-

>KJC3_003238-T1 ID=KJC3_003238-T1|Name=KJC3_003238-T1|organism=Aspergillus niger KJC3|type=CDS|length=1467bp|location=Sequence derived from alignment at ch3:1381666..1382858- (Aspergillus niger KJC3)
ACGTGTAAGAACTTCGCGACGCTTGCGCAACGAGGCTACTACAACAATGT
CATCTTCCACCGCATTATCCCCAACTTCATGGTACAAACTGGCGATCCTA
CCGGCACTGGCAGAGGAGGAAGCTCTATCTACGGCGAGAAATTCGAGGAC
GAGATTAATCCCAACCTCAAGCATACCGGTGCTGGAATTCTGAGCATGGC
AAACAGCGGGCCCAACACCAACGGCAGTCAGTTTTTCATTACGCTTGCCC
CAACACCATGGCTGGATGGAAAGCACACTATATTTGGTCGCGTCAAGAGT
GGCATGAGGGTGATCCAGCGCATGGGACTGGTTAAGACAAATTCGGAAGA
CCGGCCTGTGGACGAGGTGAAAATTCTCCGTGCCAGAATCGTGGAGGAGA
CGGGAGACGAGTGAGGCTCGTTCACAGTAGAGCTCTACAATGCGCATGCG
CCCAAGATGGCGACTGACGTGGCTTTCGACACGAGCATGACGTGTAAGAA
CTTCGCGACGCTTGCGCAACGAGGCTACTACAACAATGTCATCTTCCACC
GCATTATCCCCAACTTCATGGTACAAACTGGCGATCCTACCGGCACTGGC
AGAGGAGGAAGCTCTATCTACGGCGAGAAATTCGAGGACGAGATTAATCC
CAACCTCAAGCATACCGGTGCTGGAATTCTGAGCATGGCAAACAGCGGGC
CCAACACCAACGGCAGTCAGTTTTTCATTACGCTTGCCCCAACACCATGG
CTGGATGGAAAGCACACTATATTTGGTCGCGTCAAGAGTGGCATGAGGGT
GATCCAGCGCATGGGACTGGTTAAGACAAATTCGGAAGACCGGCCTGTGG
ACGAGGTGAAAATTCTCCGTGCCAGAATCGTGGAGGAGACGGGAGACGAG
TGAGGCTCGTTCACAGTAGAGCTCTACAATGCGCATGCGCCCAAGATGGC
GACTGACGTGGCTTTCGACACGAGCATGACGTGTAAGAACTTCGCGACGC
TTGCGCAACGAGGCTACTACAACAATGTCATCTTCCACCGCATTATCCCC
AACTTCATGGTACAAACTGGCGATCCTACCGGCACTGGCAGAGGAGGAAG
CTCTATCTACGGCGAGAAATTCGAGGACGAGATTAATCCCAACCTCAAGC
ATACCGGTGCTGGAATTCTGAGCATGGCAAACAGCGGGCCCAACACCAAC
GGCAGTCAGTTTTTCATTACGCTTGCCCCAACACCATGGCTGGATGGAAA
GCACACTATATTTGGTCGCGTCAAGAGTGGCATGAGGGTGATCCAGCGCA
TGGGACTGGTTAAGACAAATTCGGAAGACCGGCCTGTGGACGAGGTGAAA
ATTCTCCGTGCCAGAATCGTGGAGGAGACGGGAGACGAGTGAGGCTCGTT
CACAGTAGAGCTCTACAATGCGCATGCGCCCAAGATGGCGACTGACGTGG
CTTTCGACACGAGCATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0000413protein peptidyl-prolyl isomerization
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003238KJC3_003238Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003238-T1KJC3_003238-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003238-T1.cdsKJC3_003238-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003238-T1.utr3p1KJC3_003238-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003238-T1.exon3KJC3_003238-T1.exon3Aspergillus niger KJC3exon
KJC3_003238-T1.exon2KJC3_003238-T1.exon2Aspergillus niger KJC3exon
KJC3_003238-T1.exon1KJC3_003238-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003238-T1.utr5p1KJC3_003238-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR020892
DBxrefInterPro:IPR024936
DBxrefInterPro:IPR029000
DBxrefInterPro:IPR002130
DBxrefPFAM:PF00160
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1381666..1382858 -
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