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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1413037..1414388+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003251-T1 ID=KJC3_003251-T1|Name=KJC3_003251-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1352bp|location=Sequence derived from alignment at ch3:1413037..1414388+ (Aspergillus niger KJC3)
GTTACTCAGTATAATATTATTTCCACATGCTAATGATTAGACAGTTGTTG
ATCGTCCTTCGCCCGAGTTCGGAAGCCTCTAGTGCAGCGCTAACATCACT
TCTATGACCACTAGCCCCACGTGACGTGTAACGGCTTATGTACAATGAGT
CAATAATGAGCTCTCCATCTCACGCCTTCTGTAAAATTCCAACCCTGTCC
AGCGGATTCGAGGTTTCTTCTCCTCTCATATATTCACATTATATATCAAT
CATGGCTGACATCAAGCCCCCTTTCACTGAAGAATCAGCTCGGAAGAAGG
TCAAGGCAGCCCAGAACCTATGGAATACTAAGTGAGATTTTCCTTCACGA
TGTGTATCCCTCGGGAGATCTAGAATCCTCGATCTTGCATTTTGTCGTCA
TTTTCGACGCTGGTATGAGGGGTTAAAGTCTGATGTGAACTCAACTTTTC
ACCCCTTGCGCCCAACCGAGGCCTTTTACCTCGTGTTCCCCATTCTTCAC
GCCGTGCTGTGATCTGATTCCATTTCTCTCTGATACCCCACGGCATTCTT
AACAGCTGCTGAAACTCGCACACTGTTTCTACTCTACTGCTTGTTTGAAT
GCTGACGGACTTTGCGTGTAGGGATCCCGTGCGAGTTGCACAGGCTTATA
CACCCACATGTATTTGGCGCAATCGGACTTCATTCTTCTCTGGAACAGAA
GGAATCATTGAATTCTTGACGGCGAAATGGAAGAGGGAGAAAAGCTATAA
GCTACGAAAGGAACTATTTTCATTCACCAACAACCGCATCGCAGTGCAGT
TTTGGTACGAGTATCAAGATGCTGATGATAGTCTGCGTTGGAAGCGTTGC
TATGGCCTCGAAGACTGGACCTTCGATCCGGAGACAGGAAAGATGTGTAA
GAGAATGATGAGCGGCAACGATGTGCTCATCGGCCCCGACGGAAATGGAG
AGGGAAGATGGTTCGTGGAAGGAGTAGACGTCGAAGACGTTAAGATCGGA
GAGGAGCATTGGTGAAAGTTTACATCTAATTGTCTGCGCATCTTGGGGCC
GCTGTCATTTACTTTTTTAAGAAGAACACCCATCCCCAGTCATTAAAGTG
AAAAGTAATGCGATGGAGATATGGCGACTCATGATGCTCCGTATGCTATG
TGGGATGCGAGAAGTACTGTAGGATTCCAAGTTCGGTTTCTCCGTCATCC
TTTTCGACAAGGGAACCTATCAACACATTAGGAAGTGTTATGTGTTAGCA
GTGGTGATTTGATAATATCTTGGATAAGACACTCGAGGACTGGCTTGCGT
CCACAAGCAGAGATCGCAGGTGAAATCCCCGAAGCCCAATGCAAGAGTAG
AG back to topCoding sequence (CDS) from alignment at ch3:1413037..1414388+ >KJC3_003251-T1 ID=KJC3_003251-T1|Name=KJC3_003251-T1|organism=Aspergillus niger KJC3|type=CDS|length=1176bp|location=Sequence derived from alignment at ch3:1413037..1414388+ (Aspergillus niger KJC3)
ATGTACAATGAGTCAATAATGAGCTCTCCATCTCACGCCTTCTGTAAAAT
TCCAACCCTGTCCAGCGGATTCGAGGTTTCTTCTCCTCTCATATATTCAC
ATTATATATCAATCATGGCTGACATCAAGCCCCCTTTCACTGAAGAATCA
GCTCGGAAGAAGGTCAAGGCAGCCCAGAACCTATGGAATACTAAGGATCC
CGTGCGAGTTGCACAGGCTTATACACCCACATGTATTTGGCGCAATCGGA
CTTCATTCTTCTCTGGAACAGAAGGAATCATTGAATTCTTGACGGCGAAA
TGGAAGAGGGAGAAAAGCTATAAGCTACGAAAGGAACTATTTTCATTCAC
CAACAACCGCATCGCAGTGCAGTTTTGGTACGAGTATCAAGATGCTGATG
ATAGTCTGCGTTGGAAGCGTTGCTATGGCCTCGAAGACTGGACCTTCGAT
CCGGAGACAGGAAAGATGTGTAAGAGAATGATGAGCGGCAACGATGTGCT
CATCGGCCCCGACGGAAATGGAGAGGGAAGATGGTTCGTGGAAGGAGTAG
ACGTCGAAGACGTTAAGATCGGAGAGGAGCATTGGTGAATGTACAATGAG
TCAATAATGAGCTCTCCATCTCACGCCTTCTGTAAAATTCCAACCCTGTC
CAGCGGATTCGAGGTTTCTTCTCCTCTCATATATTCACATTATATATCAA
TCATGGCTGACATCAAGCCCCCTTTCACTGAAGAATCAGCTCGGAAGAAG
GTCAAGGCAGCCCAGAACCTATGGAATACTAAGGATCCCGTGCGAGTTGC
ACAGGCTTATACACCCACATGTATTTGGCGCAATCGGACTTCATTCTTCT
CTGGAACAGAAGGAATCATTGAATTCTTGACGGCGAAATGGAAGAGGGAG
AAAAGCTATAAGCTACGAAAGGAACTATTTTCATTCACCAACAACCGCAT
CGCAGTGCAGTTTTGGTACGAGTATCAAGATGCTGATGATAGTCTGCGTT
GGAAGCGTTGCTATGGCCTCGAAGACTGGACCTTCGATCCGGAGACAGGA
AAGATGTGTAAGAGAATGATGAGCGGCAACGATGTGCTCATCGGCCCCGA
CGGAAATGGAGAGGGAAGATGGTTCGTGGAAGGAGTAGACGTCGAAGACG
TTAAGATCGGAGAGGAGCATTGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003251-T1.utr5p1 | KJC3_003251-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003251-T1.utr3p1 | KJC3_003251-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032710 |
| DBxref | InterPro:IPR009783 |
| DBxref | PFAM:PF07080 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1413037..1414388 + |
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