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KJC3_003254-T1, KJC3_003254-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003254-T1
Unique NameKJC3_003254-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1421872..1423395-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003254-T1 ID=KJC3_003254-T1|Name=KJC3_003254-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1524bp|location=Sequence derived from alignment at ch3:1421872..1423395- (Aspergillus niger KJC3)
ATGTCCGGCAACCCCAACGACCACAACGACCCGAACCGGCAGGGCCCGTA
CCGCAATCCCAACGATTTCAACGATCCTAATCGGCCGGGACAGTATCCGC
CTCCACCGCAATGGAATACTAGTCAACCTGAGCAGCCTGCTGACGGCCAA
GCTCCTCACTATCCGCCATCCTCTCAGTATCCTGTATGTTGCTTGCTCTT
TTGCTTCTATTCCGATTTTTTTTTTTCTTTCCTTTTTATACGTGCTTCAT
ACCATTTATTCCTCAATTTATCTCTCATGTGCCTTCGAACTCCGCTGGCT
TGCGATGCGGCTCTTATTCGATTGTCAAACGGTGCATTGGCTAACCTTGA
TGCTATCTTCACTCCATTAGTATCCTCCGGCTTCGTACCCTCCAACTTCA
TATCCCCCGACTTCCTATCCACCACCAGAGCACCAATACCCGCCTGCACC
TGGGCAGTATCCGCCTCCGCCGAACATGGCAGCTATCCCCCCTCCACAGT
CGCAGGACCCCTACCGCATGGCACCCCCTCCCGGCTCCTACCGCCCCCCA
GACATGTACAGCGCACCCCCTCCGCCTCAAGTAGTCTACCAAGCTGCTGC
TCCCCGTCAGCGGACTGCCATCGCGTGTCGTTATTGCCGGAGACGGAAGG
TACGTTCTCGCGTCGATTCTGTCAAATGGCTCCCTTTATGGGACGCTCGT
CTTATACTCGGTCGCAACTGACGCTTTTCTTTCCGGAACCAATAGATTCG
TTGCTCGGGATTTGAAAGCTCTCAGGATGGACGCTGCAGCAACTGCATCC
GCTTCAACCAGGAGTGCATGTTCACGCCAGTCTCATCCCAGGCGCAAGCC
TTTGTACCTGCCCATGCCGCCTACCCGCACCTACGGAATGCCCAAAACCA
AGGCCGCGGACCGCCTCCTGGAGGAGTGATGCTCTATGGTGCCCATGGCC
AGCCTCTCCCACCACAGCAGCAGCCGGAGAGTACACTTCCATCCGCGTAC
CCTCCTCAATACGCAAACGCTCCTCCTCTACCCAATGGAGCTCAGGATCA
TGTGAGTAGCACGAGCTTCTTATTGCGATCCAACTGGTTCTCTCTTTACT
AATCTTCTTTGATCAGAGGCCTGTCGGTCGTCGAGGATCAAGCTCCGGTT
TTGAATATCCCGATCCCACAAATCTCGCCCCGGTAACACCCGCTTCATCT
GCCTCTGGCTATCAGACGTATAGTGCGACGAGTCCATACTACCCGCCGCC
TCCTCAGCATGAGCGACGTACCTCTCCGCAATCTAGTTACCCCTATGATG
GTCGCCATTCCTCGTCTCCTCACAGCTCCCCGTATCCCCCTGTTCACCCC
AACCAAGGGGCGATGACTCCTCCCCCTACTTCCACCCCGGGTGTTTCATC
TCGCGGTGGACTGAACGTGCGAGATATGTTGAACCCTGGAGAAGGTCAGA
ACCCGGGCCAAGGTCGTTCTAGCACCGATAGTGACATGCTCAATGCATTG
AACCGTCGGGGCCTAGGCCAATAG
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Coding sequence (CDS) from alignment at ch3:1421872..1423395-

>KJC3_003254-T1 ID=KJC3_003254-T1|Name=KJC3_003254-T1|organism=Aspergillus niger KJC3|type=CDS|length=4704bp|location=Sequence derived from alignment at ch3:1421872..1423395- (Aspergillus niger KJC3)
AGGCCTGTCGGTCGTCGAGGATCAAGCTCCGGTTTTGAATATCCCGATCC
CACAAATCTCGCCCCGGTAACACCCGCTTCATCTGCCTCTGGCTATCAGA
CGTATAGTGCGACGAGTCCATACTACCCGCCGCCTCCTCAGCATGAGCGA
CGTACCTCTCCGCAATCTAGTTACCCCTATGATGGTCGCCATTCCTCGTC
TCCTCACAGCTCCCCGTATCCCCCTGTTCACCCCAACCAAGGGGCGATGA
CTCCTCCCCCTACTTCCACCCCGGGTGTTTCATCTCGCGGTGGACTGAAC
GTGCGAGATATGTTGAACCCTGGAGAAGGTCAGAACCCGGGCCAAGGTCG
TTCTAGCACCGATAGTGACATGCTCAATGCATTGAACCGTCGGGGCCTAG
GCCAATAGATTCGTTGCTCGGGATTTGAAAGCTCTCAGGATGGACGCTGC
AGCAACTGCATCCGCTTCAACCAGGAGTGCATGTTCACGCCAGTCTCATC
CCAGGCGCAAGCCTTTGTACCTGCCCATGCCGCCTACCCGCACCTACGGA
ATGCCCAAAACCAAGGCCGCGGACCGCCTCCTGGAGGAGTGATGCTCTAT
GGTGCCCATGGCCAGCCTCTCCCACCACAGCAGCAGCCGGAGAGTACACT
TCCATCCGCGTACCCTCCTCAATACGCAAACGCTCCTCCTCTACCCAATG
GAGCTCAGGATCATTATCCTCCGGCTTCGTACCCTCCAACTTCATATCCC
CCGACTTCCTATCCACCACCAGAGCACCAATACCCGCCTGCACCTGGGCA
GTATCCGCCTCCGCCGAACATGGCAGCTATCCCCCCTCCACAGTCGCAGG
ACCCCTACCGCATGGCACCCCCTCCCGGCTCCTACCGCCCCCCAGACATG
TACAGCGCACCCCCTCCGCCTCAAGTAGTCTACCAAGCTGCTGCTCCCCG
TCAGCGGACTGCCATCGCGTGTCGTTATTGCCGGAGACGGAAGATGTCCG
GCAACCCCAACGACCACAACGACCCGAACCGGCAGGGCCCGTACCGCAAT
CCCAACGATTTCAACGATCCTAATCGGCCGGGACAGTATCCGCCTCCACC
GCAATGGAATACTAGTCAACCTGAGCAGCCTGCTGACGGCCAAGCTCCTC
ACTATCCGCCATCCTCTCAGTATCCTAGGCCTGTCGGTCGTCGAGGATCA
AGCTCCGGTTTTGAATATCCCGATCCCACAAATCTCGCCCCGGTAACACC
CGCTTCATCTGCCTCTGGCTATCAGACGTATAGTGCGACGAGTCCATACT
ACCCGCCGCCTCCTCAGCATGAGCGACGTACCTCTCCGCAATCTAGTTAC
CCCTATGATGGTCGCCATTCCTCGTCTCCTCACAGCTCCCCGTATCCCCC
TGTTCACCCCAACCAAGGGGCGATGACTCCTCCCCCTACTTCCACCCCGG
GTGTTTCATCTCGCGGTGGACTGAACGTGCGAGATATGTTGAACCCTGGA
GAAGGTCAGAACCCGGGCCAAGGTCGTTCTAGCACCGATAGTGACATGCT
CAATGCATTGAACCGTCGGGGCCTAGGCCAATAGATTCGTTGCTCGGGAT
TTGAAAGCTCTCAGGATGGACGCTGCAGCAACTGCATCCGCTTCAACCAG
GAGTGCATGTTCACGCCAGTCTCATCCCAGGCGCAAGCCTTTGTACCTGC
CCATGCCGCCTACCCGCACCTACGGAATGCCCAAAACCAAGGCCGCGGAC
CGCCTCCTGGAGGAGTGATGCTCTATGGTGCCCATGGCCAGCCTCTCCCA
CCACAGCAGCAGCCGGAGAGTACACTTCCATCCGCGTACCCTCCTCAATA
CGCAAACGCTCCTCCTCTACCCAATGGAGCTCAGGATCATTATCCTCCGG
CTTCGTACCCTCCAACTTCATATCCCCCGACTTCCTATCCACCACCAGAG
CACCAATACCCGCCTGCACCTGGGCAGTATCCGCCTCCGCCGAACATGGC
AGCTATCCCCCCTCCACAGTCGCAGGACCCCTACCGCATGGCACCCCCTC
CCGGCTCCTACCGCCCCCCAGACATGTACAGCGCACCCCCTCCGCCTCAA
GTAGTCTACCAAGCTGCTGCTCCCCGTCAGCGGACTGCCATCGCGTGTCG
TTATTGCCGGAGACGGAAGATGTCCGGCAACCCCAACGACCACAACGACC
CGAACCGGCAGGGCCCGTACCGCAATCCCAACGATTTCAACGATCCTAAT
CGGCCGGGACAGTATCCGCCTCCACCGCAATGGAATACTAGTCAACCTGA
GCAGCCTGCTGACGGCCAAGCTCCTCACTATCCGCCATCCTCTCAGTATC
CTAGGCCTGTCGGTCGTCGAGGATCAAGCTCCGGTTTTGAATATCCCGAT
CCCACAAATCTCGCCCCGGTAACACCCGCTTCATCTGCCTCTGGCTATCA
GACGTATAGTGCGACGAGTCCATACTACCCGCCGCCTCCTCAGCATGAGC
GACGTACCTCTCCGCAATCTAGTTACCCCTATGATGGTCGCCATTCCTCG
TCTCCTCACAGCTCCCCGTATCCCCCTGTTCACCCCAACCAAGGGGCGAT
GACTCCTCCCCCTACTTCCACCCCGGGTGTTTCATCTCGCGGTGGACTGA
ACGTGCGAGATATGTTGAACCCTGGAGAAGGTCAGAACCCGGGCCAAGGT
CGTTCTAGCACCGATAGTGACATGCTCAATGCATTGAACCGTCGGGGCCT
AGGCCAATAGATTCGTTGCTCGGGATTTGAAAGCTCTCAGGATGGACGCT
GCAGCAACTGCATCCGCTTCAACCAGGAGTGCATGTTCACGCCAGTCTCA
TCCCAGGCGCAAGCCTTTGTACCTGCCCATGCCGCCTACCCGCACCTACG
GAATGCCCAAAACCAAGGCCGCGGACCGCCTCCTGGAGGAGTGATGCTCT
ATGGTGCCCATGGCCAGCCTCTCCCACCACAGCAGCAGCCGGAGAGTACA
CTTCCATCCGCGTACCCTCCTCAATACGCAAACGCTCCTCCTCTACCCAA
TGGAGCTCAGGATCATTATCCTCCGGCTTCGTACCCTCCAACTTCATATC
CCCCGACTTCCTATCCACCACCAGAGCACCAATACCCGCCTGCACCTGGG
CAGTATCCGCCTCCGCCGAACATGGCAGCTATCCCCCCTCCACAGTCGCA
GGACCCCTACCGCATGGCACCCCCTCCCGGCTCCTACCGCCCCCCAGACA
TGTACAGCGCACCCCCTCCGCCTCAAGTAGTCTACCAAGCTGCTGCTCCC
CGTCAGCGGACTGCCATCGCGTGTCGTTATTGCCGGAGACGGAAGATGTC
CGGCAACCCCAACGACCACAACGACCCGAACCGGCAGGGCCCGTACCGCA
ATCCCAACGATTTCAACGATCCTAATCGGCCGGGACAGTATCCGCCTCCA
CCGCAATGGAATACTAGTCAACCTGAGCAGCCTGCTGACGGCCAAGCTCC
TCACTATCCGCCATCCTCTCAGTATCCTAGGCCTGTCGGTCGTCGAGGAT
CAAGCTCCGGTTTTGAATATCCCGATCCCACAAATCTCGCCCCGGTAACA
CCCGCTTCATCTGCCTCTGGCTATCAGACGTATAGTGCGACGAGTCCATA
CTACCCGCCGCCTCCTCAGCATGAGCGACGTACCTCTCCGCAATCTAGTT
ACCCCTATGATGGTCGCCATTCCTCGTCTCCTCACAGCTCCCCGTATCCC
CCTGTTCACCCCAACCAAGGGGCGATGACTCCTCCCCCTACTTCCACCCC
GGGTGTTTCATCTCGCGGTGGACTGAACGTGCGAGATATGTTGAACCCTG
GAGAAGGTCAGAACCCGGGCCAAGGTCGTTCTAGCACCGATAGTGACATG
CTCAATGCATTGAACCGTCGGGGCCTAGGCCAATAGATTCGTTGCTCGGG
ATTTGAAAGCTCTCAGGATGGACGCTGCAGCAACTGCATCCGCTTCAACC
AGGAGTGCATGTTCACGCCAGTCTCATCCCAGGCGCAAGCCTTTGTACCT
GCCCATGCCGCCTACCCGCACCTACGGAATGCCCAAAACCAAGGCCGCGG
ACCGCCTCCTGGAGGAGTGATGCTCTATGGTGCCCATGGCCAGCCTCTCC
CACCACAGCAGCAGCCGGAGAGTACACTTCCATCCGCGTACCCTCCTCAA
TACGCAAACGCTCCTCCTCTACCCAATGGAGCTCAGGATCATTATCCTCC
GGCTTCGTACCCTCCAACTTCATATCCCCCGACTTCCTATCCACCACCAG
AGCACCAATACCCGCCTGCACCTGGGCAGTATCCGCCTCCGCCGAACATG
GCAGCTATCCCCCCTCCACAGTCGCAGGACCCCTACCGCATGGCACCCCC
TCCCGGCTCCTACCGCCCCCCAGACATGTACAGCGCACCCCCTCCGCCTC
AAGTAGTCTACCAAGCTGCTGCTCCCCGTCAGCGGACTGCCATCGCGTGT
CGTTATTGCCGGAGACGGAAGATGTCCGGCAACCCCAACGACCACAACGA
CCCGAACCGGCAGGGCCCGTACCGCAATCCCAACGATTTCAACGATCCTA
ATCGGCCGGGACAGTATCCGCCTCCACCGCAATGGAATACTAGTCAACCT
GAGCAGCCTGCTGACGGCCAAGCTCCTCACTATCCGCCATCCTCTCAGTA
TCCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003254KJC3_003254Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003254-T1KJC3_003254-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003254-T1.cdsKJC3_003254-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003254-T1.exon4KJC3_003254-T1.exon4Aspergillus niger KJC3exon
KJC3_003254-T1.exon3KJC3_003254-T1.exon3Aspergillus niger KJC3exon
KJC3_003254-T1.exon2KJC3_003254-T1.exon2Aspergillus niger KJC3exon
KJC3_003254-T1.exon1KJC3_003254-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1421872..1423395 -
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