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KJC3_003258-T1, KJC3_003258-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003258-T1
Unique NameKJC3_003258-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1442517..1443769+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003258-T1 ID=KJC3_003258-T1|Name=KJC3_003258-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1253bp|location=Sequence derived from alignment at ch3:1442517..1443769+ (Aspergillus niger KJC3)
ATGGAAACCTCGTTGACAACCATGATCCCGGAGGTTTTTGAATCTCGCAA
GCGCAAGATTCTCGCAGACCTGTCCATCCCCGACGCAGAGTATACTGATC
TGTCGCCGAAGGGCTCTGTGGATGAAGGTATTCGCGTCCTCATCAACGAT
ATAAATACCCTGCCAGGGTTGGTGACCACTAGCAGCTGTGCGGGAAGGAT
CAGTGTGTTCCTGGAGGGGCGAAAGAAGCAACAGCAGCAGCAGCAGCAGC
AGCAAGCGGTGTCAGACGAGCAGCAACAGCAGCAGAGGCAGTTCGTACCA
TCCGGGGGCAAAGGAGCAGGAAAGTGGTTATATGTGTCTCATGAGCCCTT
GCAAAAATATGGGAAGGTGCGAGAAAAAGAGCAAGAGCGCCAGCCACTGC
ATGAGTTGTTTGGGATGATCCCTGGGGATGGCAGGCCTCCCGGGTTGAAC
AAGGATGGTCAGGCCCCGCGTCTCGTGCGCTTCTCTTTTGAGCCTATGGT
ATGTCCTTCCCTGCCCCTCTTTTGTTCCCTGCTGGTCCCTGTTCTGTGGG
TATCATGGCCACTGTGTATTCCTGTCATGTCACGGGTTGTCCGGGTTCTT
AGTGTCAGCCTTACTACTGTTGACCTCCTACTGCCCCCGTAAGCTATGTG
AGACTTGCGTTCAGACAGCGAGGCACGTACCTTGTTCTCAAATCCTCACA
TACTGACAAACTATTCCAATAGATCCTCCATATTATGGCAGCAACACTAC
ACCATGCTCACCCCGTGCTATCTGCCGCTTCAACCTCCGGCTTTCGAGAG
AGCGGACTGCAGAGTCTCCGTTGCTTAGAAGCAAATGACATTGAGGGCCC
AAGTCCCATCGTCGCTGTGCGATCTGCCGGTCTCTCATTGGAGTCTGTCA
TCGGGTACTGCGAAGAAACCGATGACGACAATGATGACGGAGGAGAACCC
ATTATCCGCAGTCTGGTCACAGAAGAGTTTCTTGAAATGCTGGTTAATAT
TTCGAATGAGAGATTCGCTGTGAATTCTGAACGTAAGGAGAGATTTCGCA
CGAATTTGTTAGATCTTTGTTCGACGGATCACCATCAACATGGCGCAAAA
GGGAGAGGAAAATCAAAGCCCCCTGGTTGGGAGGATCCGGAGAAGCGAAG
GGAGAGGATGAGGGCAGAAGGACTGTTGAGGAAGCAGCTTGCGCAAAATC
AGAGAAAAGAAGATGATGTGGATTTGGATTTGTCTGGGGCAAGTCTGGAG
TGA
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Coding sequence (CDS) from alignment at ch3:1442517..1443769+

>KJC3_003258-T1 ID=KJC3_003258-T1|Name=KJC3_003258-T1|organism=Aspergillus niger KJC3|type=CDS|length=2058bp|location=Sequence derived from alignment at ch3:1442517..1443769+ (Aspergillus niger KJC3)
ATGGAAACCTCGTTGACAACCATGATCCCGGAGGTTTTTGAATCTCGCAA
GCGCAAGATTCTCGCAGACCTGTCCATCCCCGACGCAGAGTATACTGATC
TGTCGCCGAAGGGCTCTGTGGATGAAGGTATTCGCGTCCTCATCAACGAT
ATAAATACCCTGCCAGGGTTGGTGACCACTAGCAGCTGTGCGGGAAGGAT
CAGTGTGTTCCTGGAGGGGCGAAAGAAGCAACAGCAGCAGCAGCAGCAGC
AGCAAGCGGTGTCAGACGAGCAGCAACAGCAGCAGAGGCAGTTCGTACCA
TCCGGGGGCAAAGGAGCAGGAAAGTGGTTATATGTGTCTCATGAGCCCTT
GCAAAAATATGGGAAGGTGCGAGAAAAAGAGCAAGAGCGCCAGCCACTGC
ATGAGTTGTTTGGGATGATCCCTGGGGATGGCAGGCCTCCCGGGTTGAAC
AAGGATGGTCAGGCCCCGCGTCTCGTGCGCTTCTCTTTTGAGCCTATGAT
CCTCCATATTATGGCAGCAACACTACACCATGCTCACCCCGTGCTATCTG
CCGCTTCAACCTCCGGCTTTCGAGAGAGCGGACTGCAGAGTCTCCGTTGC
TTAGAAGCAAATGACATTGAGGGCCCAAGTCCCATCGTCGCTGTGCGATC
TGCCGGTCTCTCATTGGAGTCTGTCATCGGGTACTGCGAAGAAACCGATG
ACGACAATGATGACGGAGGAGAACCCATTATCCGCAGTCTGGTCACAGAA
GAGTTTCTTGAAATGCTGGTTAATATTTCGAATGAGAGATTCGCTGTGAA
TTCTGAACGTAAGGAGAGATTTCGCACGAATTTGTTAGATCTTTGTTCGA
CGGATCACCATCAACATGGCGCAAAAGGGAGAGGAAAATCAAAGCCCCCT
GGTTGGGAGGATCCGGAGAAGCGAAGGGAGAGGATGAGGGCAGAAGGACT
GTTGAGGAAGCAGCTTGCGCAAAATCAGAGAAAAGAAGATGATGTGGATT
TGGATTTGTCTGGGGCAAGTCTGGAGTGAATGGAAACCTCGTTGACAACC
ATGATCCCGGAGGTTTTTGAATCTCGCAAGCGCAAGATTCTCGCAGACCT
GTCCATCCCCGACGCAGAGTATACTGATCTGTCGCCGAAGGGCTCTGTGG
ATGAAGGTATTCGCGTCCTCATCAACGATATAAATACCCTGCCAGGGTTG
GTGACCACTAGCAGCTGTGCGGGAAGGATCAGTGTGTTCCTGGAGGGGCG
AAAGAAGCAACAGCAGCAGCAGCAGCAGCAGCAAGCGGTGTCAGACGAGC
AGCAACAGCAGCAGAGGCAGTTCGTACCATCCGGGGGCAAAGGAGCAGGA
AAGTGGTTATATGTGTCTCATGAGCCCTTGCAAAAATATGGGAAGGTGCG
AGAAAAAGAGCAAGAGCGCCAGCCACTGCATGAGTTGTTTGGGATGATCC
CTGGGGATGGCAGGCCTCCCGGGTTGAACAAGGATGGTCAGGCCCCGCGT
CTCGTGCGCTTCTCTTTTGAGCCTATGATCCTCCATATTATGGCAGCAAC
ACTACACCATGCTCACCCCGTGCTATCTGCCGCTTCAACCTCCGGCTTTC
GAGAGAGCGGACTGCAGAGTCTCCGTTGCTTAGAAGCAAATGACATTGAG
GGCCCAAGTCCCATCGTCGCTGTGCGATCTGCCGGTCTCTCATTGGAGTC
TGTCATCGGGTACTGCGAAGAAACCGATGACGACAATGATGACGGAGGAG
AACCCATTATCCGCAGTCTGGTCACAGAAGAGTTTCTTGAAATGCTGGTT
AATATTTCGAATGAGAGATTCGCTGTGAATTCTGAACGTAAGGAGAGATT
TCGCACGAATTTGTTAGATCTTTGTTCGACGGATCACCATCAACATGGCG
CAAAAGGGAGAGGAAAATCAAAGCCCCCTGGTTGGGAGGATCCGGAGAAG
CGAAGGGAGAGGATGAGGGCAGAAGGACTGTTGAGGAAGCAGCTTGCGCA
AAATCAGAGAAAAGAAGATGATGTGGATTTGGATTTGTCTGGGGCAAGTC
TGGAGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003258KJC3_003258Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003258-T1.exon1KJC3_003258-T1.exon1Aspergillus niger KJC3exon
KJC3_003258-T1.exon2KJC3_003258-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003258-T1.cdsKJC3_003258-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003258-T1KJC3_003258-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003827
DBxrefInterPro:IPR036602
DBxrefPFAM:PF02676
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1442517..1443769 +
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