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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1443917..1446263- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003259-T1 ID=KJC3_003259-T1|Name=KJC3_003259-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2347bp|location=Sequence derived from alignment at ch3:1443917..1446263- (Aspergillus niger KJC3)
ATGGTGTTTTCCAGACAAAACCCTCCTTCTCGCAAGCTCAATATGCCTCC
TTTCGGTAGGATTCCCGTCACTCTCCCCAGGCCTCATGAACCTCACTACG
ATCCTGTCGCCCCAAGAAATGTGTATTACGATCCTTTCCTAGGTTACGCC
CCAAGCCCATCTACTGACACTGTCTGTATCCCTTTTGCTACGAATCGCCT
CACCCCGGTTCCTGTTCAACCAGGTCAGCTCCAACAGCCATGCCCCTCTA
CCACTCCCTTGACTTCTTCCAGCATCCCTGTGATGAATAACGGCATTCAT
AAGCTTGGACCACACGTGAATTTTGCAGGATATCCCAACCCCACTAGCAG
AGCTGCTCCGCCCAACGAGGTGCCATACGGGAGCTTGGTCCGCTACATGG
AACCCCCTATCTGGGGCGTCATCAAAATTTCAAACGTGAGTGACTGGCTG
ACTCGATTCTCGGCGACGTCTACTAACCTTGGGCCAGATCCCCTATTCCA
TCACCAAGCAGGAGATCTTCCAGTTTGTTGGCAGACAGGCACGACTTGTT
CCAGGCCACGCAGTACACATAATCATGGAACGTCCCACTGCTAAGACGAT
GGACTGTTTTGTGGAGTTTGCTTCGACTGAAGATGCTGAAGAGACGGCGA
ACCGAATCAACCGAATCTATGAGTGTGGGCGTGCGCCTCGACTCGGCAAT
AGACACGTTGAAGTTGAGCTCAGCAACCAAGAGGAACTGCTGAAAGTTTT
GTTTCCACGTGCAAAGTGCATCAGCTGGGAAAATGGTACGCCTAAGGTTG
TGGAGAATACTGATAGATATTCCACCGGCTTTACTGGCTTTTTTACCAGC
GAAGAGATCATCGGCGCCATTCGTCATGCTGAAATACCTCAACGTGTAAG
TCCTTCAGCCGGTGTCATTTTATAGCAGCAATGTCTAACAACTTCTTAGT
CTCCCTTCGGTGCCAAGTGTCCGCAGCGTACTTACGAATCTACCATAAGC
ACGCTCTATAAGGTAGAGTTTTATTCAGCTGAAGGTGATAGTATTCTGAC
AGAGCACAGTTTCCTTGGTATGCAACCGACATGTACACCGTGCACGACCG
TAACCAGCTATTCGAGTTGACAAACCGCCACATACGTTCTCTGGTGTCAC
GGATGGAAAAGACCAAGACCGTTGGGCTTGACCAACGTCTGCTTCGCGAG
CTCCTCTACGCCGGTCTAAATTGCCCTGTATTTAATGAGCGCCAGAAGTA
TACCCTTTGCATTCACGCCGGCGAGAAAAGCGAAATTCTCAAGTTGGGAG
ACATGAGCAAGTGGTTCCCCTTCGATACTCTGGTCTACTTGCCTGGCTTT
GATTATGACACCTGCGCGGTATGTCCCCTTCCAGAACTATATTAGTCTGT
CCATACTCTTCTTGGCGTGCTGTCTAGTCATGCATTCTTCGCCCACTATT
TCTTTCCACTGATAGCTGCAGCAGTTGTATGCCAACGTCATCGCAAACGG
TAGATTCGAGGGCGCCTGCCGCGAGTTCCCGAACAATTTCCCTGAAGACA
ATACCACTCTCCTATCACCCTTCGGTCGCATTTGGTTTGAGTGGCCAACC
GATGTCGCTAAGAATACTCTTTGGGTTGACGCCGTTAATCGTGAAACCAA
TGTGCTCAACTGTCTTCTTCAGAGCGGCTCCATGGGAACAATCCACAGAC
CACTTTCGATGACCAGCACCTCAAGCAATGTTTCTCCCACCTCTCCAATC
ACTGATAAAAGTGTGCCACGAAACGAGAATGTGTCCCGGGTCAGCATTTT
GCAGGCCTCATCGCGTCGTGCCAGCGAATGCTGGAACAGCGGCAGCGTTC
TTCTTGATACCGAAGGCGTTTGGAGTCAGAAGGTGTTCTTTAGCCCGCCT
AACAGGTTCCGAACTCCTAGTCACCGCATCACCCATTCATCGCCCAACTG
TCTCAAGGATCTAAACCAGTGATGTCCGCAGAGGCAGAAGTAAGAATGCT
GAGGATATGCTGTGCTGCGCGTTTTCTGAACAGGTACTGTCTTTCCTAAA
TTCCCTTCTGGACAGAGTTCAAAATCTGCGGATATTAGTTTCTGTTCTCA
TCTTGGTGTTGCCGCCTTGGACCAGAAGAGAGCTGTCATAGCTTGATGAG
AATTGCAGATACGATCATGACTTACGGAATACTTTGATTTATGCAAATGG
TTGGATTTAGCGATTTCGTGCGATGTGATTTGGGATCATAACCGGCTTGC
GTTCTCATTTGGACCATTGTGTGCTCTCCTTGCTCTGCTGTTTGCTTCTG
ACGTTCATTTTTCACTGAAACAACTCTACATACGGCCAAGTTTCGAC back to topCoding sequence (CDS) from alignment at ch3:1443917..1446263- >KJC3_003259-T1 ID=KJC3_003259-T1|Name=KJC3_003259-T1|organism=Aspergillus niger KJC3|type=CDS|length=4968bp|location=Sequence derived from alignment at ch3:1443917..1446263- (Aspergillus niger KJC3)
TTTCCTTGGTATGCAACCGACATGTACACCGTGCACGACCGTAACCAGCT
ATTCGAGTTGACAAACCGCCACATACGTTCTCTGGTGTCACGGATGGAAA
AGACCAAGACCGTTGGGCTTGACCAACGTCTGCTTCGCGAGCTCCTCTAC
GCCGGTCTAAATTGCCCTGTATTTAATGAGCGCCAGAAGTATACCCTTTG
CATTCACGCCGGCGAGAAAAGCGAAATTCTCAAGTTGGGAGACATGAGCA
AGTGGTTCCCCTTCGATACTCTGGTCTACTTGCCTGGCTTTGATTATGAC
ACCTGCGCGGTATGTCCCCTTCCAGAACTATATTAGTCTCCCTTCGGTGC
CAAGTGTCCGCAGCGTACTTACGAATCTACCATAAGCACGCTCTATAAGA
TCCCCTATTCCATCACCAAGCAGGAGATCTTCCAGTTTGTTGGCAGACAG
GCACGACTTGTTCCAGGCCACGCAGTACACATAATCATGGAACGTCCCAC
TGCTAAGACGATGGACTGTTTTGTGGAGTTTGCTTCGACTGAAGATGCTG
AAGAGACGGCGAACCGAATCAACCGAATCTATGAGTGTGGGCGTGCGCCT
CGACTCGGCAATAGACACGTTGAAGTTGAGCTCAGCAACCAAGAGGAACT
GCTGAAAGTTTTGTTTCCACGTGCAAAGTGCATCAGCTGGGAAAATGGTA
CGCCTAAGGTTGTGGAGAATACTGATAGATATTCCACCGGCTTTACTGGC
TTTTTTACCAGCGAAGAGATCATCGGCGCCATTCGTCATGCTGAAATACC
TCAACGTATGGTGTTTTCCAGACAAAACCCTCCTTCTCGCAAGCTCAATA
TGCCTCCTTTCGGTAGGATTCCCGTCACTCTCCCCAGGCCTCATGAACCT
CACTACGATCCTGTCGCCCCAAGAAATGTGTATTACGATCCTTTCCTAGG
TTACGCCCCAAGCCCATCTACTGACACTGTCTGTATCCCTTTTGCTACGA
ATCGCCTCACCCCGGTTCCTGTTCAACCAGGTCAGCTCCAACAGCCATGC
CCCTCTACCACTCCCTTGACTTCTTCCAGCATCCCTGTGATGAATAACGG
CATTCATAAGCTTGGACCACACGTGAATTTTGCAGGATATCCCAACCCCA
CTAGCAGAGCTGCTCCGCCCAACGAGGTGCCATACGGGAGCTTGGTCCGC
TACATGGAACCCCCTATCTGGGGCGTCATCAAAATTTCAAACTTTCCTTG
GTATGCAACCGACATGTACACCGTGCACGACCGTAACCAGCTATTCGAGT
TGACAAACCGCCACATACGTTCTCTGGTGTCACGGATGGAAAAGACCAAG
ACCGTTGGGCTTGACCAACGTCTGCTTCGCGAGCTCCTCTACGCCGGTCT
AAATTGCCCTGTATTTAATGAGCGCCAGAAGTATACCCTTTGCATTCACG
CCGGCGAGAAAAGCGAAATTCTCAAGTTGGGAGACATGAGCAAGTGGTTC
CCCTTCGATACTCTGGTCTACTTGCCTGGCTTTGATTATGACACCTGCGC
GGTATGTCCCCTTCCAGAACTATATTAGTCTCCCTTCGGTGCCAAGTGTC
CGCAGCGTACTTACGAATCTACCATAAGCACGCTCTATAAGATCCCCTAT
TCCATCACCAAGCAGGAGATCTTCCAGTTTGTTGGCAGACAGGCACGACT
TGTTCCAGGCCACGCAGTACACATAATCATGGAACGTCCCACTGCTAAGA
CGATGGACTGTTTTGTGGAGTTTGCTTCGACTGAAGATGCTGAAGAGACG
GCGAACCGAATCAACCGAATCTATGAGTGTGGGCGTGCGCCTCGACTCGG
CAATAGACACGTTGAAGTTGAGCTCAGCAACCAAGAGGAACTGCTGAAAG
TTTTGTTTCCACGTGCAAAGTGCATCAGCTGGGAAAATGGTACGCCTAAG
GTTGTGGAGAATACTGATAGATATTCCACCGGCTTTACTGGCTTTTTTAC
CAGCGAAGAGATCATCGGCGCCATTCGTCATGCTGAAATACCTCAACGTA
TGGTGTTTTCCAGACAAAACCCTCCTTCTCGCAAGCTCAATATGCCTCCT
TTCGGTAGGATTCCCGTCACTCTCCCCAGGCCTCATGAACCTCACTACGA
TCCTGTCGCCCCAAGAAATGTGTATTACGATCCTTTCCTAGGTTACGCCC
CAAGCCCATCTACTGACACTGTCTGTATCCCTTTTGCTACGAATCGCCTC
ACCCCGGTTCCTGTTCAACCAGGTCAGCTCCAACAGCCATGCCCCTCTAC
CACTCCCTTGACTTCTTCCAGCATCCCTGTGATGAATAACGGCATTCATA
AGCTTGGACCACACGTGAATTTTGCAGGATATCCCAACCCCACTAGCAGA
GCTGCTCCGCCCAACGAGGTGCCATACGGGAGCTTGGTCCGCTACATGGA
ACCCCCTATCTGGGGCGTCATCAAAATTTCAAACTTTCCTTGGTATGCAA
CCGACATGTACACCGTGCACGACCGTAACCAGCTATTCGAGTTGACAAAC
CGCCACATACGTTCTCTGGTGTCACGGATGGAAAAGACCAAGACCGTTGG
GCTTGACCAACGTCTGCTTCGCGAGCTCCTCTACGCCGGTCTAAATTGCC
CTGTATTTAATGAGCGCCAGAAGTATACCCTTTGCATTCACGCCGGCGAG
AAAAGCGAAATTCTCAAGTTGGGAGACATGAGCAAGTGGTTCCCCTTCGA
TACTCTGGTCTACTTGCCTGGCTTTGATTATGACACCTGCGCGGTATGTC
CCCTTCCAGAACTATATTAGTCTCCCTTCGGTGCCAAGTGTCCGCAGCGT
ACTTACGAATCTACCATAAGCACGCTCTATAAGATCCCCTATTCCATCAC
CAAGCAGGAGATCTTCCAGTTTGTTGGCAGACAGGCACGACTTGTTCCAG
GCCACGCAGTACACATAATCATGGAACGTCCCACTGCTAAGACGATGGAC
TGTTTTGTGGAGTTTGCTTCGACTGAAGATGCTGAAGAGACGGCGAACCG
AATCAACCGAATCTATGAGTGTGGGCGTGCGCCTCGACTCGGCAATAGAC
ACGTTGAAGTTGAGCTCAGCAACCAAGAGGAACTGCTGAAAGTTTTGTTT
CCACGTGCAAAGTGCATCAGCTGGGAAAATGGTACGCCTAAGGTTGTGGA
GAATACTGATAGATATTCCACCGGCTTTACTGGCTTTTTTACCAGCGAAG
AGATCATCGGCGCCATTCGTCATGCTGAAATACCTCAACGTATGGTGTTT
TCCAGACAAAACCCTCCTTCTCGCAAGCTCAATATGCCTCCTTTCGGTAG
GATTCCCGTCACTCTCCCCAGGCCTCATGAACCTCACTACGATCCTGTCG
CCCCAAGAAATGTGTATTACGATCCTTTCCTAGGTTACGCCCCAAGCCCA
TCTACTGACACTGTCTGTATCCCTTTTGCTACGAATCGCCTCACCCCGGT
TCCTGTTCAACCAGGTCAGCTCCAACAGCCATGCCCCTCTACCACTCCCT
TGACTTCTTCCAGCATCCCTGTGATGAATAACGGCATTCATAAGCTTGGA
CCACACGTGAATTTTGCAGGATATCCCAACCCCACTAGCAGAGCTGCTCC
GCCCAACGAGGTGCCATACGGGAGCTTGGTCCGCTACATGGAACCCCCTA
TCTGGGGCGTCATCAAAATTTCAAACTTTCCTTGGTATGCAACCGACATG
TACACCGTGCACGACCGTAACCAGCTATTCGAGTTGACAAACCGCCACAT
ACGTTCTCTGGTGTCACGGATGGAAAAGACCAAGACCGTTGGGCTTGACC
AACGTCTGCTTCGCGAGCTCCTCTACGCCGGTCTAAATTGCCCTGTATTT
AATGAGCGCCAGAAGTATACCCTTTGCATTCACGCCGGCGAGAAAAGCGA
AATTCTCAAGTTGGGAGACATGAGCAAGTGGTTCCCCTTCGATACTCTGG
TCTACTTGCCTGGCTTTGATTATGACACCTGCGCGGTATGTCCCCTTCCA
GAACTATATTAGTCTCCCTTCGGTGCCAAGTGTCCGCAGCGTACTTACGA
ATCTACCATAAGCACGCTCTATAAGATCCCCTATTCCATCACCAAGCAGG
AGATCTTCCAGTTTGTTGGCAGACAGGCACGACTTGTTCCAGGCCACGCA
GTACACATAATCATGGAACGTCCCACTGCTAAGACGATGGACTGTTTTGT
GGAGTTTGCTTCGACTGAAGATGCTGAAGAGACGGCGAACCGAATCAACC
GAATCTATGAGTGTGGGCGTGCGCCTCGACTCGGCAATAGACACGTTGAA
GTTGAGCTCAGCAACCAAGAGGAACTGCTGAAAGTTTTGTTTCCACGTGC
AAAGTGCATCAGCTGGGAAAATGGTACGCCTAAGGTTGTGGAGAATACTG
ATAGATATTCCACCGGCTTTACTGGCTTTTTTACCAGCGAAGAGATCATC
GGCGCCATTCGTCATGCTGAAATACCTCAACGTATGGTGTTTTCCAGACA
AAACCCTCCTTCTCGCAAGCTCAATATGCCTCCTTTCGGTAGGATTCCCG
TCACTCTCCCCAGGCCTCATGAACCTCACTACGATCCTGTCGCCCCAAGA
AATGTGTATTACGATCCTTTCCTAGGTTACGCCCCAAGCCCATCTACTGA
CACTGTCTGTATCCCTTTTGCTACGAATCGCCTCACCCCGGTTCCTGTTC
AACCAGGTCAGCTCCAACAGCCATGCCCCTCTACCACTCCCTTGACTTCT
TCCAGCATCCCTGTGATGAATAACGGCATTCATAAGCTTGGACCACACGT
GAATTTTGCAGGATATCCCAACCCCACTAGCAGAGCTGCTCCGCCCAACG
AGGTGCCATACGGGAGCTTGGTCCGCTACATGGAACCCCCTATCTGGGGC
GTCATCAAAATTTCAAAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR000504 |
| DBxref | InterPro:IPR012677 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1443917..1446263 - |
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