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KJC3_003261-T1, KJC3_003261-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003261-T1
Unique NameKJC3_003261-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1448591..1450656+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003261-T1 ID=KJC3_003261-T1|Name=KJC3_003261-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2066bp|location=Sequence derived from alignment at ch3:1448591..1450656+ (Aspergillus niger KJC3)
GACTGACGCAGTCGTTGTTTACGCAACTGCATCCTACCGCCAGACCTTAG
AGGAGGCATCAATCGCATCCAAGAAGGACCCTTGAAACAAGTCACAATGG
CTTCTATACCTGGTAAGTATCTTTAGGGCCGTATGCTCCATTCCACTCTA
TCTTGTTTCTTCTCCGCTGATCCCATGACGCAGTTGTTGTAAAGCACCAG
GGCAAACGCTACGAGGTGGAGCTCGATCCTTCCCTGAATGGCGAAACGCT
CAAATACCAGCTATTTTCTCTCACTGGCGTCGAACCCGAGCGGCAGAAGA
TCCTAGTCAAGGGAGGCCAGCTTAAAGATGATACACCTCTGTCCTCCCTC
AACGCCAAACCCGGCCAAACGTTCATGATGATGGGCACTCCGTCGGGCGG
TCAAGGTGCTGGAGACTTGGGTAGACCAAAGGAAGTCGTCAAGTTTTTGG
AAGACATGACGGAAGCTGAAGCTGCCAGGGCGGAGGGTGCAACTCCTGCA
GGTCTGCAGAACCTTGGAAATACTTGCTACCTGAACTCAACGCTACAGAC
ACTACGGAGCGTTCCCGAACTCCAGGATGCGCTGCTCAAATACCGACCTT
CTGGGGGCTCTTCTGGAGGTTCTAGCCTTTCGAACCTCAGTAGTCTCGGT
CTTGGCGGCTTGGGAGCTTCTATGGATCTCACGTCCTCTCTGCGGGACCT
CTTCAAGCAAATGTCGGAGACGCAGGAAGGTTTCCCGCCGCTTATGTTTC
TCAACGCGCTTCGAAATGCTTTCCCCCAATTTGCTCAAAGGGATCGCAAT
GGACATGGCTATGCTCAACAGGATGCCGAAGAGGCCTGGTCACAGATCGT
GAGTCAGCTGCGTAACAAGCTGGTCGTGAAGGAGGGTGAAGGTGACTCTG
CCGCCGAAGTTTCCTTCGTGGATAAGTACATGGCCGGAGGGTTTGAGTCC
ACCACCGAATGCGACGAAAAGGCCGCAAAGGAGGCTGGTGAAGAACCTAC
TAATAGCTCCGATGTGTTTTACAAGCTTGATTGTCATATTGGTAAAGAGA
CTAACCATTTGCACGACGGTATTATGGCTGGTCTCGAGGAGAAGATCGAA
AAGCGGTCCTCTACTCTTGACCGCGATGCCGTATATACCAAACGTTCACG
CATTGCGCGCTTGCCCAAGTACTTGACGGTGCATTTCGTTCGGTTCTTCT
GGAAGCGCGAAACACAGAAGAAGGCCAAGATTATGCGAAAGGTCACATTC
CCCGCTGAGCTTGATGCGGTGGACTTCTGCACCGACGAATTGAAAAAGCA
GCTCATTCCTGTGAGAGACAAGGTCCGTGAGATTCGGAAGGAAGAGGTGG
ATGTTGAACGTGCTCGTAAGCGTCAAAAGCTCGCTCACCGGAAAGAGGAG
GAAGAAAAGAAAGAGGCCGAGTCCGGGGCAAGCATGGAGCCGATGCAGAA
GAAGAAAGCTGCTGAAGAGCGCAAGGGAGAGTCTAAAGCCGCGGAGAAAG
ACGGAGATGAGGCCATGACCGATGTGTTCAAGTCCGATGCAGACTACGAA
GCTGAGAAGACCGCCTCGATTCTCGCGGCTAAGAAAGAATTGTCTGAGCT
CATTGACCCCAGTCTTGCCTCAGACAGCGGTGTGAACAAGACGGGTCTCT
ACGAACTACGCGGAGTGATCACACATCAGGGTGCAAGTGCAGACAGCGGA
CATTACACCGCGTACGTGAAAAAGCAGTCCAGCAGTGATGGTGCAAGCAC
CGAAGACAAGTGGTGGTGGTTCAACGATGAGAAGGTTACCGAAGTGGAAG
GGGACAAGATTGAGACGCTTGCTGGTGGTGGTAAGCCCCCTGGAACCATT
GTTACTCGATTCTGATAATCAACGGACTTCTAACCTTCATTTCCAGGTGA
ATCCCATTCTGCACTTATTCTCCTCTACCGGGCTGTTGAGGTGCCGACGA
CGAATTAAGCAGGGCCCTCACTTTATCTCACGAGTATCAAGCTAGAAACG
GTATGCATAGATAATGAGCTTATGGCTGAATGTTAGGAACAAATGTTTCT
GCTCAACAAATTATTG
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Coding sequence (CDS) from alignment at ch3:1448591..1450656+

>KJC3_003261-T1 ID=KJC3_003261-T1|Name=KJC3_003261-T1|organism=Aspergillus niger KJC3|type=CDS|length=5175bp|location=Sequence derived from alignment at ch3:1448591..1450656+ (Aspergillus niger KJC3)
ATGGCTTCTATACCTGTTGTTGTAAAGCACCAGGGCAAACGCTACGAGGT
GGAGCTCGATCCTTCCCTGAATGGCGAAACGCTCAAATACCAGCTATTTT
CTCTCACTGGCGTCGAACCCGAGCGGCAGAAGATCCTAGTCAAGGGAGGC
CAGCTTAAAGATGATACACCTCTGTCCTCCCTCAACGCCAAACCCGGCCA
AACGTTCATGATGATGGGCACTCCGTCGGGCGGTCAAGGTGCTGGAGACT
TGGGTAGACCAAAGGAAGTCGTCAAGTTTTTGGAAGACATGACGGAAGCT
GAAGCTGCCAGGGCGGAGGGTGCAACTCCTGCAGGTCTGCAGAACCTTGG
AAATACTTGCTACCTGAACTCAACGCTACAGACACTACGGAGCGTTCCCG
AACTCCAGGATGCGCTGCTCAAATACCGACCTTCTGGGGGCTCTTCTGGA
GGTTCTAGCCTTTCGAACCTCAGTAGTCTCGGTCTTGGCGGCTTGGGAGC
TTCTATGGATCTCACGTCCTCTCTGCGGGACCTCTTCAAGCAAATGTCGG
AGACGCAGGAAGGTTTCCCGCCGCTTATGTTTCTCAACGCGCTTCGAAAT
GCTTTCCCCCAATTTGCTCAAAGGGATCGCAATGGACATGGCTATGCTCA
ACAGGATGCCGAAGAGGCCTGGTCACAGATCGTGAGTCAGCTGCGTAACA
AGCTGGTCGTGAAGGAGGGTGAAGGTGACTCTGCCGCCGAAGTTTCCTTC
GTGGATAAGTACATGGCCGGAGGGTTTGAGTCCACCACCGAATGCGACGA
AAAGGCCGCAAAGGAGGCTGGTGAAGAACCTACTAATAGCTCCGATGTGT
TTTACAAGCTTGATTGTCATATTGGTAAAGAGACTAACCATTTGCACGAC
GGTATTATGGCTGGTCTCGAGGAGAAGATCGAAAAGCGGTCCTCTACTCT
TGACCGCGATGCCGTATATACCAAACGTTCACGCATTGCGCGCTTGCCCA
AGTACTTGACGGTGCATTTCGTTCGGTTCTTCTGGAAGCGCGAAACACAG
AAGAAGGCCAAGATTATGCGAAAGGTCACATTCCCCGCTGAGCTTGATGC
GGTGGACTTCTGCACCGACGAATTGAAAAAGCAGCTCATTCCTGTGAGAG
ACAAGGTCCGTGAGATTCGGAAGGAAGAGGTGGATGTTGAACGTGCTCGT
AAGCGTCAAAAGCTCGCTCACCGGAAAGAGGAGGAAGAAAAGAAAGAGGC
CGAGTCCGGGGCAAGCATGGAGCCGATGCAGAAGAAGAAAGCTGCTGAAG
AGCGCAAGGGAGAGTCTAAAGCCGCGGAGAAAGACGGAGATGAGGCCATG
ACCGATGTGTTCAAGTCCGATGCAGACTACGAAGCTGAGAAGACCGCCTC
GATTCTCGCGGCTAAGAAAGAATTGTCTGAGCTCATTGACCCCAGTCTTG
CCTCAGACAGCGGTGTGAACAAGACGGGTCTCTACGAACTACGCGGAGTG
ATCACACATCAGGGTGCAAGTGCAGACAGCGGACATTACACCGCGTACGT
GAAAAAGCAGTCCAGCAGTGATGGTGCAAGCACCGAAGACAAGTGGTGGT
GGTTCAACGATGAGAAGGTTACCGAAGTGGAAGGGGACAAGATTGAGACG
CTTGCTGGTGGTGGTGAATCCCATTCTGCACTTATTCTCCTCTACCGGGC
TGTTGAGGTGCCGACGACGAATTAAATGGCTTCTATACCTGTTGTTGTAA
AGCACCAGGGCAAACGCTACGAGGTGGAGCTCGATCCTTCCCTGAATGGC
GAAACGCTCAAATACCAGCTATTTTCTCTCACTGGCGTCGAACCCGAGCG
GCAGAAGATCCTAGTCAAGGGAGGCCAGCTTAAAGATGATACACCTCTGT
CCTCCCTCAACGCCAAACCCGGCCAAACGTTCATGATGATGGGCACTCCG
TCGGGCGGTCAAGGTGCTGGAGACTTGGGTAGACCAAAGGAAGTCGTCAA
GTTTTTGGAAGACATGACGGAAGCTGAAGCTGCCAGGGCGGAGGGTGCAA
CTCCTGCAGGTCTGCAGAACCTTGGAAATACTTGCTACCTGAACTCAACG
CTACAGACACTACGGAGCGTTCCCGAACTCCAGGATGCGCTGCTCAAATA
CCGACCTTCTGGGGGCTCTTCTGGAGGTTCTAGCCTTTCGAACCTCAGTA
GTCTCGGTCTTGGCGGCTTGGGAGCTTCTATGGATCTCACGTCCTCTCTG
CGGGACCTCTTCAAGCAAATGTCGGAGACGCAGGAAGGTTTCCCGCCGCT
TATGTTTCTCAACGCGCTTCGAAATGCTTTCCCCCAATTTGCTCAAAGGG
ATCGCAATGGACATGGCTATGCTCAACAGGATGCCGAAGAGGCCTGGTCA
CAGATCGTGAGTCAGCTGCGTAACAAGCTGGTCGTGAAGGAGGGTGAAGG
TGACTCTGCCGCCGAAGTTTCCTTCGTGGATAAGTACATGGCCGGAGGGT
TTGAGTCCACCACCGAATGCGACGAAAAGGCCGCAAAGGAGGCTGGTGAA
GAACCTACTAATAGCTCCGATGTGTTTTACAAGCTTGATTGTCATATTGG
TAAAGAGACTAACCATTTGCACGACGGTATTATGGCTGGTCTCGAGGAGA
AGATCGAAAAGCGGTCCTCTACTCTTGACCGCGATGCCGTATATACCAAA
CGTTCACGCATTGCGCGCTTGCCCAAGTACTTGACGGTGCATTTCGTTCG
GTTCTTCTGGAAGCGCGAAACACAGAAGAAGGCCAAGATTATGCGAAAGG
TCACATTCCCCGCTGAGCTTGATGCGGTGGACTTCTGCACCGACGAATTG
AAAAAGCAGCTCATTCCTGTGAGAGACAAGGTCCGTGAGATTCGGAAGGA
AGAGGTGGATGTTGAACGTGCTCGTAAGCGTCAAAAGCTCGCTCACCGGA
AAGAGGAGGAAGAAAAGAAAGAGGCCGAGTCCGGGGCAAGCATGGAGCCG
ATGCAGAAGAAGAAAGCTGCTGAAGAGCGCAAGGGAGAGTCTAAAGCCGC
GGAGAAAGACGGAGATGAGGCCATGACCGATGTGTTCAAGTCCGATGCAG
ACTACGAAGCTGAGAAGACCGCCTCGATTCTCGCGGCTAAGAAAGAATTG
TCTGAGCTCATTGACCCCAGTCTTGCCTCAGACAGCGGTGTGAACAAGAC
GGGTCTCTACGAACTACGCGGAGTGATCACACATCAGGGTGCAAGTGCAG
ACAGCGGACATTACACCGCGTACGTGAAAAAGCAGTCCAGCAGTGATGGT
GCAAGCACCGAAGACAAGTGGTGGTGGTTCAACGATGAGAAGGTTACCGA
AGTGGAAGGGGACAAGATTGAGACGCTTGCTGGTGGTGGTGAATCCCATT
CTGCACTTATTCTCCTCTACCGGGCTGTTGAGGTGCCGACGACGAATTAA
ATGGCTTCTATACCTGTTGTTGTAAAGCACCAGGGCAAACGCTACGAGGT
GGAGCTCGATCCTTCCCTGAATGGCGAAACGCTCAAATACCAGCTATTTT
CTCTCACTGGCGTCGAACCCGAGCGGCAGAAGATCCTAGTCAAGGGAGGC
CAGCTTAAAGATGATACACCTCTGTCCTCCCTCAACGCCAAACCCGGCCA
AACGTTCATGATGATGGGCACTCCGTCGGGCGGTCAAGGTGCTGGAGACT
TGGGTAGACCAAAGGAAGTCGTCAAGTTTTTGGAAGACATGACGGAAGCT
GAAGCTGCCAGGGCGGAGGGTGCAACTCCTGCAGGTCTGCAGAACCTTGG
AAATACTTGCTACCTGAACTCAACGCTACAGACACTACGGAGCGTTCCCG
AACTCCAGGATGCGCTGCTCAAATACCGACCTTCTGGGGGCTCTTCTGGA
GGTTCTAGCCTTTCGAACCTCAGTAGTCTCGGTCTTGGCGGCTTGGGAGC
TTCTATGGATCTCACGTCCTCTCTGCGGGACCTCTTCAAGCAAATGTCGG
AGACGCAGGAAGGTTTCCCGCCGCTTATGTTTCTCAACGCGCTTCGAAAT
GCTTTCCCCCAATTTGCTCAAAGGGATCGCAATGGACATGGCTATGCTCA
ACAGGATGCCGAAGAGGCCTGGTCACAGATCGTGAGTCAGCTGCGTAACA
AGCTGGTCGTGAAGGAGGGTGAAGGTGACTCTGCCGCCGAAGTTTCCTTC
GTGGATAAGTACATGGCCGGAGGGTTTGAGTCCACCACCGAATGCGACGA
AAAGGCCGCAAAGGAGGCTGGTGAAGAACCTACTAATAGCTCCGATGTGT
TTTACAAGCTTGATTGTCATATTGGTAAAGAGACTAACCATTTGCACGAC
GGTATTATGGCTGGTCTCGAGGAGAAGATCGAAAAGCGGTCCTCTACTCT
TGACCGCGATGCCGTATATACCAAACGTTCACGCATTGCGCGCTTGCCCA
AGTACTTGACGGTGCATTTCGTTCGGTTCTTCTGGAAGCGCGAAACACAG
AAGAAGGCCAAGATTATGCGAAAGGTCACATTCCCCGCTGAGCTTGATGC
GGTGGACTTCTGCACCGACGAATTGAAAAAGCAGCTCATTCCTGTGAGAG
ACAAGGTCCGTGAGATTCGGAAGGAAGAGGTGGATGTTGAACGTGCTCGT
AAGCGTCAAAAGCTCGCTCACCGGAAAGAGGAGGAAGAAAAGAAAGAGGC
CGAGTCCGGGGCAAGCATGGAGCCGATGCAGAAGAAGAAAGCTGCTGAAG
AGCGCAAGGGAGAGTCTAAAGCCGCGGAGAAAGACGGAGATGAGGCCATG
ACCGATGTGTTCAAGTCCGATGCAGACTACGAAGCTGAGAAGACCGCCTC
GATTCTCGCGGCTAAGAAAGAATTGTCTGAGCTCATTGACCCCAGTCTTG
CCTCAGACAGCGGTGTGAACAAGACGGGTCTCTACGAACTACGCGGAGTG
ATCACACATCAGGGTGCAAGTGCAGACAGCGGACATTACACCGCGTACGT
GAAAAAGCAGTCCAGCAGTGATGGTGCAAGCACCGAAGACAAGTGGTGGT
GGTTCAACGATGAGAAGGTTACCGAAGTGGAAGGGGACAAGATTGAGACG
CTTGCTGGTGGTGGTGAATCCCATTCTGCACTTATTCTCCTCTACCGGGC
TGTTGAGGTGCCGACGACGAATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO:0016579protein deubiquitination
Vocabulary: Molecular Function
TermDefinition
GO:0004843thiol-dependent ubiquitin-specific protease activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003261KJC3_003261Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003261-T1KJC3_003261-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003261-T1.utr5p1KJC3_003261-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003261-T1.exon1KJC3_003261-T1.exon1Aspergillus niger KJC3exon
KJC3_003261-T1.exon2KJC3_003261-T1.exon2Aspergillus niger KJC3exon
KJC3_003261-T1.exon3KJC3_003261-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003261-T1.cdsKJC3_003261-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003261-T1.utr3p1KJC3_003261-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263BGW
NoteMEROPS:MER0004316
DBxrefInterPro:IPR038765
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR028889
DBxrefInterPro:IPR018200
DBxrefInterPro:IPR001394
DBxrefInterPro:IPR000626
DBxrefPFAM:PF13423
DBxrefPFAM:PF00443
DBxrefPFAM:PF00240
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1448591..1450656 +
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