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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1458581..1460704- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003265-T1 ID=KJC3_003265-T1|Name=KJC3_003265-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2124bp|location=Sequence derived from alignment at ch3:1458581..1460704- (Aspergillus niger KJC3)
GGCGAACCTTGGCCACCCACCAGATCGCCACCATTTTTTTGCTTCAATAA
TCCCCCGCCTCACTTGCATTGTGGTTGGTAATTCTGGGCTTATACGAGTT
GTGTCTTCTAATTGCCATGCGGACTATGGATCTAGTTGAATCTTGAAGCA
TTGATCTGCTGTATTGCCCACGGGAAGTTGGGACCGAATCTTGGCCCGTG
TGCAGGCCCTGTACAAGGTTAGATGACGAAATTGACTCCGACAGCAATGA
TGGAATACCCAGGAGAACAGAAGCCAGACTATAGATCCCCAACTCGGTTT
GGGGGCTCGATGGATGAGGGTGATAGCAATGATTCGGCTCTCTCGTTACT
GGATGAGAAAAGAGAGAAGCATTTAATTCGCAAGATCGACCTACATATCA
TACCCTTTGTTGTTCTTCTTTATCTGTTTAGCTTTCTTGACAGAGGTATG
TCTTCCCATACATCGCATCTCTGCCTCCAGTCGATGACAATTCGAATGGT
TAGCACACTCGCTAACAAGCCCTAGTTAACATTGGCAATGCGCGCCTATA
CGGAATGGAAGAAGACCTGGGTCTCGTTGGAGATCAATATCAGGTTGCCG
TGTCTATTCTATTCGTGACTTACTGTGTATGTCTGGATTCGCATACAAGC
ATCGTTTCGACGCAACGTCTAATGCTGTATAGCTCTTCGAAGTACCGTCA
AACTTGGTTATCAAGAAGCTTAGGCCGTCACGCTACATTGCGACGATATC
AGTTCTGTGGGGTATCATAGCGACCCTCACAGGTATAACCCAGAATTACG
GAGGCTTGATTGCCTGTCGCATCCTTTTGGGTTAGTTAGGGCCCGCGGGT
CAACAATGAGAACCCAAGCTAACAAATATAGGCGTCGTGGAAGCCGGACT
GTTTCCTGGGATGGTAACCTATCTCACCATTTTCTACAGCAAGCGTGAAA
TAGCACTGCGCACAGGATATCTATTTAGCAGTGCAGCCGCTGCTGGCGCA
TTTGGCGGGCTTCTAGCCTACGGTATCGGCTTTATGGACGGTGTCGCCGG
TTTACGAGGTTGGAGATGGATCATGATCATCGAGGGCATTCCAACGGTCA
TACTAGGCGTCCTATCCTGGTTTTTTCTTGCAGACGACCTTGATACAGCC
TATTATCTCGACGATGAGGAGAAGGCCCTAGTAGTTCGTCTCCGTCGTCG
CGATGTGGGCCAAACATCATCCGCCCAAAAGTTCCATTGGGCAGACGTCA
AAGAAGGTGCGCTGGACTGGAGAATTTATGCCTTCTGCATTGCTCAATTT
GGTGTCGATACTATGCTTTACGGGTATAGTACCTTCCTCCCCACGATTAT
CCAGGGGATGGGGTCCTGGTCAACACCCGAGGTGCAGGCTCTTACGATTC
CTTGCTATGCGGTGGGCGCAATAAGTTATCTGATTATTGCTTGGGCGAGC
GATCGAACTCAGCGTCGCGGAGTATTTACTTGCATCTTTGCCGCAATATC
AGTGGTAGGGTATGGAATCCTGATATCGGATTCTTCGTCAGGAGTACATT
ACTTCGGCGCCCTGCTTATTGCGCTGGGATTATACGTCGCAGTCGGATTA
CCTCTCGCATGGCTCCCGACTACACTTCCTCGTTATGGAAAGCGTACATT
CGCTACAGGTCTGCAACTCACTTTCGGCAACGTCAGTGGCGTCATGTCTC
CTTTCTTATACAAAACGAATGAAGCGCCGCGTTATGTTCGGGGAAATGCG
GTGACTCTATCGCTGGTTGGATTTGCAGGTATTGTGTATGGTCTTATGTG
GTGGTATTATTATGGGAAGAATAAGCGCAGGGAGCAGGGACTCGAAGATG
AGAAGATTGTCGGGATGTCAGAGGAAGAGATTGAGGAGATGGGAGACAGA
AATCCTCGCTTCAGATATAGTACCTAAGACGTTGCGCAAGCAAGTCTTCA
TCATGCAAACAGATCTTGGTGTTTCCATGGCTGTGGGACACAGGATATAC
ATTGTTTGTTTCTTGGTATTGATAAGCCGTCTGTCGATCATCGAAATTAA
CTGTAATACATCTCTTTTCAGATCTCAATATGAACTGAATGCATCTGCTC
ATGACGTCGGGAGGCCGTGTCCCT back to topCoding sequence (CDS) from alignment at ch3:1458581..1460704- >KJC3_003265-T1 ID=KJC3_003265-T1|Name=KJC3_003265-T1|organism=Aspergillus niger KJC3|type=CDS|length=6072bp|location=Sequence derived from alignment at ch3:1458581..1460704- (Aspergillus niger KJC3)
GCGTCGTGGAAGCCGGACTGTTTCCTGGGATGGTAACCTATCTCACCATT
TTCTACAGCAAGCGTGAAATAGCACTGCGCACAGGATATCTATTTAGCAG
TGCAGCCGCTGCTGGCGCATTTGGCGGGCTTCTAGCCTACGGTATCGGCT
TTATGGACGGTGTCGCCGGTTTACGAGGTTGGAGATGGATCATGATCATC
GAGGGCATTCCAACGGTCATACTAGGCGTCCTATCCTGGTTTTTTCTTGC
AGACGACCTTGATACAGCCTATTATCTCGACGATGAGGAGAAGGCCCTAG
TAGTTCGTCTCCGTCGTCGCGATGTGGGCCAAACATCATCCGCCCAAAAG
TTCCATTGGGCAGACGTCAAAGAAGGTGCGCTGGACTGGAGAATTTATGC
CTTCTGCATTGCTCAATTTGGTGTCGATACTATGCTTTACGGGTATAGTA
CCTTCCTCCCCACGATTATCCAGGGGATGGGGTCCTGGTCAACACCCGAG
GTGCAGGCTCTTACGATTCCTTGCTATGCGGTGGGCGCAATAAGTTATCT
GATTATTGCTTGGGCGAGCGATCGAACTCAGCGTCGCGGAGTATTTACTT
GCATCTTTGCCGCAATATCAGTGGTAGGGTATGGAATCCTGATATCGGAT
TCTTCGTCAGGAGTACATTACTTCGGCGCCCTGCTTATTGCGCTGGGATT
ATACGTCGCAGTCGGATTACCTCTCGCATGGCTCCCGACTACACTTCCTC
GTTATGGAAAGCGTACATTCGCTACAGGTCTGCAACTCACTTTCGGCAAC
GTCAGTGGCGTCATGTCTCCTTTCTTATACAAAACGAATGAAGCGCCGCG
TTATGTTCGGGGAAATGCGGTGACTCTATCGCTGGTTGGATTTGCAGGTA
TTGTGTATGGTCTTATGTGGTGGTATTATTATGGGAAGAATAAGCGCAGG
GAGCAGGGACTCGAAGATGAGAAGATTGTCGGGATGTCAGAGGAAGAGAT
TGAGGAGATGGGAGACAGAAATCCTCGCTTCAGATATAGTACCTAACTCT
TCGAAGTACCGTCAAACTTGGTTATCAAGAAGCTTAGGCCGTCACGCTAC
ATTGCGACGATATCAGTTCTGTGGGGTATCATAGCGACCCTCACAGGTAT
AACCCAGAATTACGGAGGCTTGATTGCCTGTCGCATCCTTTTGGTTAACA
TTGGCAATGCGCGCCTATACGGAATGGAAGAAGACCTGGGTCTCGTTGGA
GATCAATATCAGGTTGCCGTGTCTATTCTATTCGTGACTTACTGTATGAC
GAAATTGACTCCGACAGCAATGATGGAATACCCAGGAGAACAGAAGCCAG
ACTATAGATCCCCAACTCGGTTTGGGGGCTCGATGGATGAGGGTGATAGC
AATGATTCGGCTCTCTCGTTACTGGATGAGAAAAGAGAGAAGCATTTAAT
TCGCAAGATCGACCTACATATCATACCCTTTGTTGTTCTTCTTTATCTGT
TTAGCTTTCTTGACAGAGGCGTCGTGGAAGCCGGACTGTTTCCTGGGATG
GTAACCTATCTCACCATTTTCTACAGCAAGCGTGAAATAGCACTGCGCAC
AGGATATCTATTTAGCAGTGCAGCCGCTGCTGGCGCATTTGGCGGGCTTC
TAGCCTACGGTATCGGCTTTATGGACGGTGTCGCCGGTTTACGAGGTTGG
AGATGGATCATGATCATCGAGGGCATTCCAACGGTCATACTAGGCGTCCT
ATCCTGGTTTTTTCTTGCAGACGACCTTGATACAGCCTATTATCTCGACG
ATGAGGAGAAGGCCCTAGTAGTTCGTCTCCGTCGTCGCGATGTGGGCCAA
ACATCATCCGCCCAAAAGTTCCATTGGGCAGACGTCAAAGAAGGTGCGCT
GGACTGGAGAATTTATGCCTTCTGCATTGCTCAATTTGGTGTCGATACTA
TGCTTTACGGGTATAGTACCTTCCTCCCCACGATTATCCAGGGGATGGGG
TCCTGGTCAACACCCGAGGTGCAGGCTCTTACGATTCCTTGCTATGCGGT
GGGCGCAATAAGTTATCTGATTATTGCTTGGGCGAGCGATCGAACTCAGC
GTCGCGGAGTATTTACTTGCATCTTTGCCGCAATATCAGTGGTAGGGTAT
GGAATCCTGATATCGGATTCTTCGTCAGGAGTACATTACTTCGGCGCCCT
GCTTATTGCGCTGGGATTATACGTCGCAGTCGGATTACCTCTCGCATGGC
TCCCGACTACACTTCCTCGTTATGGAAAGCGTACATTCGCTACAGGTCTG
CAACTCACTTTCGGCAACGTCAGTGGCGTCATGTCTCCTTTCTTATACAA
AACGAATGAAGCGCCGCGTTATGTTCGGGGAAATGCGGTGACTCTATCGC
TGGTTGGATTTGCAGGTATTGTGTATGGTCTTATGTGGTGGTATTATTAT
GGGAAGAATAAGCGCAGGGAGCAGGGACTCGAAGATGAGAAGATTGTCGG
GATGTCAGAGGAAGAGATTGAGGAGATGGGAGACAGAAATCCTCGCTTCA
GATATAGTACCTAACTCTTCGAAGTACCGTCAAACTTGGTTATCAAGAAG
CTTAGGCCGTCACGCTACATTGCGACGATATCAGTTCTGTGGGGTATCAT
AGCGACCCTCACAGGTATAACCCAGAATTACGGAGGCTTGATTGCCTGTC
GCATCCTTTTGGTTAACATTGGCAATGCGCGCCTATACGGAATGGAAGAA
GACCTGGGTCTCGTTGGAGATCAATATCAGGTTGCCGTGTCTATTCTATT
CGTGACTTACTGTATGACGAAATTGACTCCGACAGCAATGATGGAATACC
CAGGAGAACAGAAGCCAGACTATAGATCCCCAACTCGGTTTGGGGGCTCG
ATGGATGAGGGTGATAGCAATGATTCGGCTCTCTCGTTACTGGATGAGAA
AAGAGAGAAGCATTTAATTCGCAAGATCGACCTACATATCATACCCTTTG
TTGTTCTTCTTTATCTGTTTAGCTTTCTTGACAGAGGCGTCGTGGAAGCC
GGACTGTTTCCTGGGATGGTAACCTATCTCACCATTTTCTACAGCAAGCG
TGAAATAGCACTGCGCACAGGATATCTATTTAGCAGTGCAGCCGCTGCTG
GCGCATTTGGCGGGCTTCTAGCCTACGGTATCGGCTTTATGGACGGTGTC
GCCGGTTTACGAGGTTGGAGATGGATCATGATCATCGAGGGCATTCCAAC
GGTCATACTAGGCGTCCTATCCTGGTTTTTTCTTGCAGACGACCTTGATA
CAGCCTATTATCTCGACGATGAGGAGAAGGCCCTAGTAGTTCGTCTCCGT
CGTCGCGATGTGGGCCAAACATCATCCGCCCAAAAGTTCCATTGGGCAGA
CGTCAAAGAAGGTGCGCTGGACTGGAGAATTTATGCCTTCTGCATTGCTC
AATTTGGTGTCGATACTATGCTTTACGGGTATAGTACCTTCCTCCCCACG
ATTATCCAGGGGATGGGGTCCTGGTCAACACCCGAGGTGCAGGCTCTTAC
GATTCCTTGCTATGCGGTGGGCGCAATAAGTTATCTGATTATTGCTTGGG
CGAGCGATCGAACTCAGCGTCGCGGAGTATTTACTTGCATCTTTGCCGCA
ATATCAGTGGTAGGGTATGGAATCCTGATATCGGATTCTTCGTCAGGAGT
ACATTACTTCGGCGCCCTGCTTATTGCGCTGGGATTATACGTCGCAGTCG
GATTACCTCTCGCATGGCTCCCGACTACACTTCCTCGTTATGGAAAGCGT
ACATTCGCTACAGGTCTGCAACTCACTTTCGGCAACGTCAGTGGCGTCAT
GTCTCCTTTCTTATACAAAACGAATGAAGCGCCGCGTTATGTTCGGGGAA
ATGCGGTGACTCTATCGCTGGTTGGATTTGCAGGTATTGTGTATGGTCTT
ATGTGGTGGTATTATTATGGGAAGAATAAGCGCAGGGAGCAGGGACTCGA
AGATGAGAAGATTGTCGGGATGTCAGAGGAAGAGATTGAGGAGATGGGAG
ACAGAAATCCTCGCTTCAGATATAGTACCTAACTCTTCGAAGTACCGTCA
AACTTGGTTATCAAGAAGCTTAGGCCGTCACGCTACATTGCGACGATATC
AGTTCTGTGGGGTATCATAGCGACCCTCACAGGTATAACCCAGAATTACG
GAGGCTTGATTGCCTGTCGCATCCTTTTGGTTAACATTGGCAATGCGCGC
CTATACGGAATGGAAGAAGACCTGGGTCTCGTTGGAGATCAATATCAGGT
TGCCGTGTCTATTCTATTCGTGACTTACTGTATGACGAAATTGACTCCGA
CAGCAATGATGGAATACCCAGGAGAACAGAAGCCAGACTATAGATCCCCA
ACTCGGTTTGGGGGCTCGATGGATGAGGGTGATAGCAATGATTCGGCTCT
CTCGTTACTGGATGAGAAAAGAGAGAAGCATTTAATTCGCAAGATCGACC
TACATATCATACCCTTTGTTGTTCTTCTTTATCTGTTTAGCTTTCTTGAC
AGAGGCGTCGTGGAAGCCGGACTGTTTCCTGGGATGGTAACCTATCTCAC
CATTTTCTACAGCAAGCGTGAAATAGCACTGCGCACAGGATATCTATTTA
GCAGTGCAGCCGCTGCTGGCGCATTTGGCGGGCTTCTAGCCTACGGTATC
GGCTTTATGGACGGTGTCGCCGGTTTACGAGGTTGGAGATGGATCATGAT
CATCGAGGGCATTCCAACGGTCATACTAGGCGTCCTATCCTGGTTTTTTC
TTGCAGACGACCTTGATACAGCCTATTATCTCGACGATGAGGAGAAGGCC
CTAGTAGTTCGTCTCCGTCGTCGCGATGTGGGCCAAACATCATCCGCCCA
AAAGTTCCATTGGGCAGACGTCAAAGAAGGTGCGCTGGACTGGAGAATTT
ATGCCTTCTGCATTGCTCAATTTGGTGTCGATACTATGCTTTACGGGTAT
AGTACCTTCCTCCCCACGATTATCCAGGGGATGGGGTCCTGGTCAACACC
CGAGGTGCAGGCTCTTACGATTCCTTGCTATGCGGTGGGCGCAATAAGTT
ATCTGATTATTGCTTGGGCGAGCGATCGAACTCAGCGTCGCGGAGTATTT
ACTTGCATCTTTGCCGCAATATCAGTGGTAGGGTATGGAATCCTGATATC
GGATTCTTCGTCAGGAGTACATTACTTCGGCGCCCTGCTTATTGCGCTGG
GATTATACGTCGCAGTCGGATTACCTCTCGCATGGCTCCCGACTACACTT
CCTCGTTATGGAAAGCGTACATTCGCTACAGGTCTGCAACTCACTTTCGG
CAACGTCAGTGGCGTCATGTCTCCTTTCTTATACAAAACGAATGAAGCGC
CGCGTTATGTTCGGGGAAATGCGGTGACTCTATCGCTGGTTGGATTTGCA
GGTATTGTGTATGGTCTTATGTGGTGGTATTATTATGGGAAGAATAAGCG
CAGGGAGCAGGGACTCGAAGATGAGAAGATTGTCGGGATGTCAGAGGAAG
AGATTGAGGAGATGGGAGACAGAAATCCTCGCTTCAGATATAGTACCTAA
CTCTTCGAAGTACCGTCAAACTTGGTTATCAAGAAGCTTAGGCCGTCACG
CTACATTGCGACGATATCAGTTCTGTGGGGTATCATAGCGACCCTCACAG
GTATAACCCAGAATTACGGAGGCTTGATTGCCTGTCGCATCCTTTTGGTT
AACATTGGCAATGCGCGCCTATACGGAATGGAAGAAGACCTGGGTCTCGT
TGGAGATCAATATCAGGTTGCCGTGTCTATTCTATTCGTGACTTACTGTA
TGACGAAATTGACTCCGACAGCAATGATGGAATACCCAGGAGAACAGAAG
CCAGACTATAGATCCCCAACTCGGTTTGGGGGCTCGATGGATGAGGGTGA
TAGCAATGATTCGGCTCTCTCGTTACTGGATGAGAAAAGAGAGAAGCATT
TAATTCGCAAGATCGACCTACATATCATACCCTTTGTTGTTCTTCTTTAT
CTGTTTAGCTTTCTTGACAGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003265-T1.utr3p1 | KJC3_003265-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003265-T1.utr5p1 | KJC3_003265-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1458581..1460704 - |
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