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KJC3_003274-T1, KJC3_003274-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003274-T1
Unique NameKJC3_003274-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1501446..1503693-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003274-T1 ID=KJC3_003274-T1|Name=KJC3_003274-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2248bp|location=Sequence derived from alignment at ch3:1501446..1503693- (Aspergillus niger KJC3)
TCGGCATCTGTCAACGTTCGCCTCCAGGACACTGACGGCACCGCCATAAT
GACGGAAGAACCGAAGGTCCTCCGGAAGGACCAGCTTGAGGTCAGCTTGC
ACAATGAGAAAAAGCTGATCAAGGAGGGAGCAATCAAAGACGACAACCCT
CTGGACCTTAGCGAGCCGTTTCGCGAGCTATGCAATGCCTGTCGTAAGGG
GGATCTCAAAGTTTGTCAAGAGAAGATCACAGAGGGAGTCAATATTAACG
CCCGTGATCCCTATGACTACACCCCCTTGATTCTGGTAAGTGGACTCGTT
GTGGGAACTACGGGAATAGACCGCCTTGCTGACTGAAGCTGTGCAATAGG
CGAGTCTCTGCGGTCATTACGAAGTTGTGCAGCTACTCCTCGAGTCTGGT
GCTCTATGCGAGCGTGACACATTCCAGGGCGAGAGGTACGTTGCTATTAC
AATGGCTTTTCTTCATGGATATCGTGTGAATTACTTACAATTGACTGCCC
ATAGATGCTTATATAATGCCTTAAACGACCGTATACGGAATCTGTTATTG
GAGTATGATTATTCGAAATCGACGGATCCACTTCAGCCTCTGGCCGCGCA
TATCACCTCTCTCCTTACTCGTGAAACTCCGATAACGTCAGACATTGTTG
TCACGGCAGCTGATGAATCCCTACACCTCCACAAGTTTATCCTGGCTGCA
CGGTCGCCGTACTTTCATCGAAAGTTGGAATCTGCCCCTGGTACGTCAAC
ATGGAAACTTCCAAATACGATTCCACCAGAGGCGTTTGGTACAGCAATCA
AATATCTCTATTTTGGAGAAGCTCCTCGCGACTTGAGAAGCGGTCCCGGC
ACGGGATTCACGGAATCGGAAGTTTTCGCGGGCATCGACAAGATAGCCAA
GCATCTAGAGATCAACACCCTCGTGGATAGTATACTTGACAGTGGGGATA
GAAGACTTGCCAGACAGAGACGCACCATGGAAGTTGCCAAAGGACGAGAC
CAACTAGAGGAGTGGTTCCGGGCGAATGTGCTCAAGCATAAAGTGACGGT
AGAGACAGCAAAGGCAGACGATATCAAGTGGGACAGGGACAATGCCATTT
ATGCGGATGTTCTGCTCCGAGCAGATGAACTCCCTGACGACGAGGAGGAT
ATTTTGGAGGAATCTGAGCAGACTAAGGTCGAACACGGGCGCTCCAACGG
GTCTGGCAGACGCGTACCGATGTCTACTCTTTTCCCTTGTCATCGGGCAA
TGCTTCTGCGATCGGAGTTCTTTCAGACCATGTTTGCCTCATCATTCCGG
GAAGCCCACATGAAGGATCACCTGAATGTCATCAGCGTGGACTGTTCTCC
GGATGTCCTGGAGATTGTACTGACCTTCCTCTATACCGAGCGGGCTGACT
TCCCGCTCGATATTGCGGTCGATGTTCTGTTCGCATCGGATATGCTATTT
ATTGAAAAGCTCAAAACGAAGGCAGCCATTGTCATCAGCACACTGGGTAG
TGGCAATATGTCGCAGGCAGAAGCTGCCCGGACACGCGGCACCAAGGAAG
AGGATGATCTGGATATCTACGCCATCATCAAGGCTGCGTGGTTGACCCGT
GTTCAACGACTCGAAGAATTTGCTGCGCGATACCTCGCGTACCGCTTGGA
AGCTCATATCGACTCGCCGGAATTTGCAGAACTTATCCAAGAGTCGGCGT
CCCGCATCCAGTCCCGACAGGAGACGGATTCCATCGAACTGTTGGATGAT
ATCCGCTTCTACCTGAGTGAGCGATTCAGGTTGCGCTTCGATGACGCCGG
TATCGATGAGATGATGGAGCCCACGCAGCCGGTGGCTGATGGTGCTGGGG
TCAACGGAGACGTTGAAAAAGTCACCGAGGGAGTGGAGACGATCCAACTT
TCAGAGGAAGGTTCTGGAGATAGAACGAGCGTGACTGTTCCGTCAGTACA
GGCCGATGCGAAGGCACAGGAGCAGCCACTCATTCATACACTGGATGGCG
AAATCGCGGTCGACGAGTTCGACCAAGATGCGATCAACTATCAGATCCTA
ATGGAGAAGCTTGACAGGATCCTAGAGAACTTGAACCTGGACGCCTAGAG
CCTGGCAGCGAGCCAGACGAGCTGACGATTGATGACTTCTACAGGTGGTA
TTTAGTGGACAGTATATAGTATACAGATATAGAAGGACTGGATACGGTGC
ATGAATGACATTCGGAAATATACTACATGGCTCGATGAGCAGTGTCCC
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Coding sequence (CDS) from alignment at ch3:1501446..1503693-

>KJC3_003274-T1 ID=KJC3_003274-T1|Name=KJC3_003274-T1|organism=Aspergillus niger KJC3|type=CDS|length=5751bp|location=Sequence derived from alignment at ch3:1501446..1503693- (Aspergillus niger KJC3)
ATGCTTATATAATGCCTTAAACGACCGTATACGGAATCTGTTATTGGAGT
ATGATTATTCGAAATCGACGGATCCACTTCAGCCTCTGGCCGCGCATATC
ACCTCTCTCCTTACTCGTGAAACTCCGATAACGTCAGACATTGTTGTCAC
GGCAGCTGATGAATCCCTACACCTCCACAAGTTTATCCTGGCTGCACGGT
CGCCGTACTTTCATCGAAAGTTGGAATCTGCCCCTGGTACGTCAACATGG
AAACTTCCAAATACGATTCCACCAGAGGCGTTTGGTACAGCAATCAAATA
TCTCTATTTTGGAGAAGCTCCTCGCGACTTGAGAAGCGGTCCCGGCACGG
GATTCACGGAATCGGAAGTTTTCGCGGGCATCGACAAGATAGCCAAGCAT
CTAGAGATCAACACCCTCGTGGATAGTATACTTGACAGTGGGGATAGAAG
ACTTGCCAGACAGAGACGCACCATGGAAGTTGCCAAAGGACGAGACCAAC
TAGAGGAGTGGTTCCGGGCGAATGTGCTCAAGCATAAAGTGACGGTAGAG
ACAGCAAAGGCAGACGATATCAAGTGGGACAGGGACAATGCCATTTATGC
GGATGTTCTGCTCCGAGCAGATGAACTCCCTGACGACGAGGAGGATATTT
TGGAGGAATCTGAGCAGACTAAGGTCGAACACGGGCGCTCCAACGGGTCT
GGCAGACGCGTACCGATGTCTACTCTTTTCCCTTGTCATCGGGCAATGCT
TCTGCGATCGGAGTTCTTTCAGACCATGTTTGCCTCATCATTCCGGGAAG
CCCACATGAAGGATCACCTGAATGTCATCAGCGTGGACTGTTCTCCGGAT
GTCCTGGAGATTGTACTGACCTTCCTCTATACCGAGCGGGCTGACTTCCC
GCTCGATATTGCGGTCGATGTTCTGTTCGCATCGGATATGCTATTTATTG
AAAAGCTCAAAACGAAGGCAGCCATTGTCATCAGCACACTGGGTAGTGGC
AATATGTCGCAGGCAGAAGCTGCCCGGACACGCGGCACCAAGGAAGAGGA
TGATCTGGATATCTACGCCATCATCAAGGCTGCGTGGTTGACCCGTGTTC
AACGACTCGAAGAATTTGCTGCGCGATACCTCGCGTACCGCTTGGAAGCT
CATATCGACTCGCCGGAATTTGCAGAACTTATCCAAGAGTCGGCGTCCCG
CATCCAGTCCCGACAGGAGACGGATTCCATCGAACTGTTGGATGATATCC
GCTTCTACCTGAGTGAGCGATTCAGGTTGCGCTTCGATGACGCCGGTATC
GATGAGATGATGGAGCCCACGCAGCCGGTGGCTGATGGTGCTGGGGTCAA
CGGAGACGTTGAAAAAGTCACCGAGGGAGTGGAGACGATCCAACTTTCAG
AGGAAGGTTCTGGAGATAGAACGAGCGTGACTGTTCCGTCAGTACAGGCC
GATGCGAAGGCACAGGAGCAGCCACTCATTCATACACTGGATGGCGAAAT
CGCGGTCGACGAGTTCGACCAAGATGCGATCAACTATCAGATCCTAATGG
AGAAGCTTGACAGGATCCTAGAGAACTTGAACCTGGACGCCTAGGCGAGT
CTCTGCGGTCATTACGAAGTTGTGCAGCTACTCCTCGAGTCTGGTGCTCT
ATGCGAGCGTGACACATTCCAGGGCGAGAGATGACGGAAGAACCGAAGGT
CCTCCGGAAGGACCAGCTTGAGGTCAGCTTGCACAATGAGAAAAAGCTGA
TCAAGGAGGGAGCAATCAAAGACGACAACCCTCTGGACCTTAGCGAGCCG
TTTCGCGAGCTATGCAATGCCTGTCGTAAGGGGGATCTCAAAGTTTGTCA
AGAGAAGATCACAGAGGGAGTCAATATTAACGCCCGTGATCCCTATGACT
ACACCCCCTTGATTCTGATGCTTATATAATGCCTTAAACGACCGTATACG
GAATCTGTTATTGGAGTATGATTATTCGAAATCGACGGATCCACTTCAGC
CTCTGGCCGCGCATATCACCTCTCTCCTTACTCGTGAAACTCCGATAACG
TCAGACATTGTTGTCACGGCAGCTGATGAATCCCTACACCTCCACAAGTT
TATCCTGGCTGCACGGTCGCCGTACTTTCATCGAAAGTTGGAATCTGCCC
CTGGTACGTCAACATGGAAACTTCCAAATACGATTCCACCAGAGGCGTTT
GGTACAGCAATCAAATATCTCTATTTTGGAGAAGCTCCTCGCGACTTGAG
AAGCGGTCCCGGCACGGGATTCACGGAATCGGAAGTTTTCGCGGGCATCG
ACAAGATAGCCAAGCATCTAGAGATCAACACCCTCGTGGATAGTATACTT
GACAGTGGGGATAGAAGACTTGCCAGACAGAGACGCACCATGGAAGTTGC
CAAAGGACGAGACCAACTAGAGGAGTGGTTCCGGGCGAATGTGCTCAAGC
ATAAAGTGACGGTAGAGACAGCAAAGGCAGACGATATCAAGTGGGACAGG
GACAATGCCATTTATGCGGATGTTCTGCTCCGAGCAGATGAACTCCCTGA
CGACGAGGAGGATATTTTGGAGGAATCTGAGCAGACTAAGGTCGAACACG
GGCGCTCCAACGGGTCTGGCAGACGCGTACCGATGTCTACTCTTTTCCCT
TGTCATCGGGCAATGCTTCTGCGATCGGAGTTCTTTCAGACCATGTTTGC
CTCATCATTCCGGGAAGCCCACATGAAGGATCACCTGAATGTCATCAGCG
TGGACTGTTCTCCGGATGTCCTGGAGATTGTACTGACCTTCCTCTATACC
GAGCGGGCTGACTTCCCGCTCGATATTGCGGTCGATGTTCTGTTCGCATC
GGATATGCTATTTATTGAAAAGCTCAAAACGAAGGCAGCCATTGTCATCA
GCACACTGGGTAGTGGCAATATGTCGCAGGCAGAAGCTGCCCGGACACGC
GGCACCAAGGAAGAGGATGATCTGGATATCTACGCCATCATCAAGGCTGC
GTGGTTGACCCGTGTTCAACGACTCGAAGAATTTGCTGCGCGATACCTCG
CGTACCGCTTGGAAGCTCATATCGACTCGCCGGAATTTGCAGAACTTATC
CAAGAGTCGGCGTCCCGCATCCAGTCCCGACAGGAGACGGATTCCATCGA
ACTGTTGGATGATATCCGCTTCTACCTGAGTGAGCGATTCAGGTTGCGCT
TCGATGACGCCGGTATCGATGAGATGATGGAGCCCACGCAGCCGGTGGCT
GATGGTGCTGGGGTCAACGGAGACGTTGAAAAAGTCACCGAGGGAGTGGA
GACGATCCAACTTTCAGAGGAAGGTTCTGGAGATAGAACGAGCGTGACTG
TTCCGTCAGTACAGGCCGATGCGAAGGCACAGGAGCAGCCACTCATTCAT
ACACTGGATGGCGAAATCGCGGTCGACGAGTTCGACCAAGATGCGATCAA
CTATCAGATCCTAATGGAGAAGCTTGACAGGATCCTAGAGAACTTGAACC
TGGACGCCTAGGCGAGTCTCTGCGGTCATTACGAAGTTGTGCAGCTACTC
CTCGAGTCTGGTGCTCTATGCGAGCGTGACACATTCCAGGGCGAGAGATG
ACGGAAGAACCGAAGGTCCTCCGGAAGGACCAGCTTGAGGTCAGCTTGCA
CAATGAGAAAAAGCTGATCAAGGAGGGAGCAATCAAAGACGACAACCCTC
TGGACCTTAGCGAGCCGTTTCGCGAGCTATGCAATGCCTGTCGTAAGGGG
GATCTCAAAGTTTGTCAAGAGAAGATCACAGAGGGAGTCAATATTAACGC
CCGTGATCCCTATGACTACACCCCCTTGATTCTGATGCTTATATAATGCC
TTAAACGACCGTATACGGAATCTGTTATTGGAGTATGATTATTCGAAATC
GACGGATCCACTTCAGCCTCTGGCCGCGCATATCACCTCTCTCCTTACTC
GTGAAACTCCGATAACGTCAGACATTGTTGTCACGGCAGCTGATGAATCC
CTACACCTCCACAAGTTTATCCTGGCTGCACGGTCGCCGTACTTTCATCG
AAAGTTGGAATCTGCCCCTGGTACGTCAACATGGAAACTTCCAAATACGA
TTCCACCAGAGGCGTTTGGTACAGCAATCAAATATCTCTATTTTGGAGAA
GCTCCTCGCGACTTGAGAAGCGGTCCCGGCACGGGATTCACGGAATCGGA
AGTTTTCGCGGGCATCGACAAGATAGCCAAGCATCTAGAGATCAACACCC
TCGTGGATAGTATACTTGACAGTGGGGATAGAAGACTTGCCAGACAGAGA
CGCACCATGGAAGTTGCCAAAGGACGAGACCAACTAGAGGAGTGGTTCCG
GGCGAATGTGCTCAAGCATAAAGTGACGGTAGAGACAGCAAAGGCAGACG
ATATCAAGTGGGACAGGGACAATGCCATTTATGCGGATGTTCTGCTCCGA
GCAGATGAACTCCCTGACGACGAGGAGGATATTTTGGAGGAATCTGAGCA
GACTAAGGTCGAACACGGGCGCTCCAACGGGTCTGGCAGACGCGTACCGA
TGTCTACTCTTTTCCCTTGTCATCGGGCAATGCTTCTGCGATCGGAGTTC
TTTCAGACCATGTTTGCCTCATCATTCCGGGAAGCCCACATGAAGGATCA
CCTGAATGTCATCAGCGTGGACTGTTCTCCGGATGTCCTGGAGATTGTAC
TGACCTTCCTCTATACCGAGCGGGCTGACTTCCCGCTCGATATTGCGGTC
GATGTTCTGTTCGCATCGGATATGCTATTTATTGAAAAGCTCAAAACGAA
GGCAGCCATTGTCATCAGCACACTGGGTAGTGGCAATATGTCGCAGGCAG
AAGCTGCCCGGACACGCGGCACCAAGGAAGAGGATGATCTGGATATCTAC
GCCATCATCAAGGCTGCGTGGTTGACCCGTGTTCAACGACTCGAAGAATT
TGCTGCGCGATACCTCGCGTACCGCTTGGAAGCTCATATCGACTCGCCGG
AATTTGCAGAACTTATCCAAGAGTCGGCGTCCCGCATCCAGTCCCGACAG
GAGACGGATTCCATCGAACTGTTGGATGATATCCGCTTCTACCTGAGTGA
GCGATTCAGGTTGCGCTTCGATGACGCCGGTATCGATGAGATGATGGAGC
CCACGCAGCCGGTGGCTGATGGTGCTGGGGTCAACGGAGACGTTGAAAAA
GTCACCGAGGGAGTGGAGACGATCCAACTTTCAGAGGAAGGTTCTGGAGA
TAGAACGAGCGTGACTGTTCCGTCAGTACAGGCCGATGCGAAGGCACAGG
AGCAGCCACTCATTCATACACTGGATGGCGAAATCGCGGTCGACGAGTTC
GACCAAGATGCGATCAACTATCAGATCCTAATGGAGAAGCTTGACAGGAT
CCTAGAGAACTTGAACCTGGACGCCTAGGCGAGTCTCTGCGGTCATTACG
AAGTTGTGCAGCTACTCCTCGAGTCTGGTGCTCTATGCGAGCGTGACACA
TTCCAGGGCGAGAGATGACGGAAGAACCGAAGGTCCTCCGGAAGGACCAG
CTTGAGGTCAGCTTGCACAATGAGAAAAAGCTGATCAAGGAGGGAGCAAT
CAAAGACGACAACCCTCTGGACCTTAGCGAGCCGTTTCGCGAGCTATGCA
ATGCCTGTCGTAAGGGGGATCTCAAAGTTTGTCAAGAGAAGATCACAGAG
GGAGTCAATATTAACGCCCGTGATCCCTATGACTACACCCCCTTGATTCT
G
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003274KJC3_003274Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003274-T1KJC3_003274-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003274-T1.cdsKJC3_003274-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003274-T1.utr3p1KJC3_003274-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003274-T1.exon3KJC3_003274-T1.exon3Aspergillus niger KJC3exon
KJC3_003274-T1.exon2KJC3_003274-T1.exon2Aspergillus niger KJC3exon
KJC3_003274-T1.exon1KJC3_003274-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003274-T1.utr5p1KJC3_003274-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011333
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR000210
DBxrefInterPro:IPR002110
DBxrefPFAM:PF00651
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1501446..1503693 -
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