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KJC3_003276-T1, KJC3_003276-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003276-T1
Unique NameKJC3_003276-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1507257..1509227-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003276-T1 ID=KJC3_003276-T1|Name=KJC3_003276-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1971bp|location=Sequence derived from alignment at ch3:1507257..1509227- (Aspergillus niger KJC3)
TGACAATCAATTCGGGATAGAGTACTACGCCAATCGATTAATCCATTTGG
AAGCGAGAGTCAACCACCATCATCCGATTGTTGGACGAACAGCACTGTTG
AAAGGGAGCGTGACCCCAAACAGGCAAGGAACTCTCTCTACTTCGCCCGC
CCGCAATTTTGACGGCATCGCGTCCTTCTCCAAACGCTCTTCTCCCACTC
CCCCGTCCTCCCCTCTCAGGCACCCAATCATCTTGTTACCACCTTCATAT
ATCCTACTCGAATCCTTCAGCCGAGGCGACTCTTAATTTCCAATCATTTT
CCCCTCGAGCCCTATTGTGCTCTGCGTCCGTACAGCTGACAAAAGCACCT
CACCAACCATCTTGTTCGAATTGCCGCACCAAGCGCTTCTTCAACCGCCA
TCGACGACGCCGTCATCTACACACCCCATACTTCAGGCCGACTAGGCCTC
CTCATTATTCGACAAAAGGAAAGAGTAAGACTCGTTGCGCTGCCCAACCC
GTGAGGCTTGAGCCTTGCGCCCTAGGTCGTCGTGACCTTCATATTATTGG
TCTTGGGTCAAGGTTCCGCAGCTACAGTCGGCTTCGCGAATCCGCTGCGC
CCGTGGTTGGCTTTCCATGCAGCTTGATTAGCTATTAGCCTGTGAGCACT
CTTCTTTCTTTCTCCCCATTGCTTAGTGTGCTGCAGGAGCTTCCTGATGG
CCATACAGCCTCCGGAGCTCGTCATACCCAAGCCTGCCCCTCTAATCCCC
GACAATTCAAAGGCTAGATTACAAAGAACTACATTGATATGTGAGATTGC
GTTTGAGTGACTGACATGAAAAATCAATTTATCCAGTACACACATAGTGC
CTAACAGTCTGACGGAATAATACCCATCCCCGTGGAGTAATTGACGCCCT
ATCCATCCACCTCACACCTCAACTCACAACTTCACCCTCCCCCAACCCAT
CACCCACCATGCCCAAAGACAAAGAACGCAGCTTGAACCCGGCAGCGGCG
CAACGCAAACTCGACAAACAAAAAAGCCTCAAAAAAGGCAAAGCGGAAGC
GCAAGCCCGACGAAACGAGAAACTAGCACGTCGCAACCCGGAGCGCATCC
AACGACAAATCAACGACCTCAAGGCATTCGAAGAATCAGGACAAAAGCTA
CGACCCCGCGATCAGGAGCTTCTGGAAGCCCTGGAACGTGATCTGCGCGC
CGTACAGAAGGCCAGAGAAGCGTTGGGCGATAAGGCACCCAAGTTCGATA
GCTTTGAATCTAGACGAGGCGGTCAGCACCGTGGGCGCGGGGATGCTGCA
GTCTTGGGCAAACGCAGGCGAGATGGCGGCGACGGCAACCGGTTTAGGCA
CGATGGTGATGGGAGTAGTAGTAGCGACGAGACAGATGAGGAGGTGAGAA
GGATACCCATGCCGAGGGATACGCCTCCGCCTATCCCGCGACAGTATCGG
AAGGGAGGGCCAGGAGAGGCTGCAGGTGGTGGTCGGGGCCCGCACGCTCT
TCCGGCGAAACCGCCCGTCGTTGAGGCGAAGACTGTGTACGAGGCCAAGC
CGGAGATCAGGAATCTCCGACAAGAGGCGATCAATAAGTTCGTTCCTGCA
GCCGTCAGGGTTAAACAGGAAGCTATTCGGGGACAAGGCAAGCTCTTGGA
ACCGGAGGAGATGGATCGGCTGGAGCAAGCAGGGTATAATGCTGGGCCTG
CAGAAGGCGAGGAGAAAGTTTCATCAGCTGCACCAGCTGATGATGAGGAC
GCTCAACGGCGACTCTTGGAAGAGGAGGAGAGGCGGTTTAATCAGGAGCT
TCGGTCCGTGCAGATCGAAGAGGTGGAGGATGAGGATGCATAATAATCAA
TCACATCCTCCACCCGTCATCCCATGATTAGGATCTTACGAGGCGTTGGT
CGGGTCTCAAATCAATGTAACTATAACTTGATGCGATACGAAAATAACAT
CAAAATCTAAAATCATCTGTC
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Coding sequence (CDS) from alignment at ch3:1507257..1509227-

>KJC3_003276-T1 ID=KJC3_003276-T1|Name=KJC3_003276-T1|organism=Aspergillus niger KJC3|type=CDS|length=885bp|location=Sequence derived from alignment at ch3:1507257..1509227- (Aspergillus niger KJC3)
ATGCCCAAAGACAAAGAACGCAGCTTGAACCCGGCAGCGGCGCAACGCAA
ACTCGACAAACAAAAAAGCCTCAAAAAAGGCAAAGCGGAAGCGCAAGCCC
GACGAAACGAGAAACTAGCACGTCGCAACCCGGAGCGCATCCAACGACAA
ATCAACGACCTCAAGGCATTCGAAGAATCAGGACAAAAGCTACGACCCCG
CGATCAGGAGCTTCTGGAAGCCCTGGAACGTGATCTGCGCGCCGTACAGA
AGGCCAGAGAAGCGTTGGGCGATAAGGCACCCAAGTTCGATAGCTTTGAA
TCTAGACGAGGCGGTCAGCACCGTGGGCGCGGGGATGCTGCAGTCTTGGG
CAAACGCAGGCGAGATGGCGGCGACGGCAACCGGTTTAGGCACGATGGTG
ATGGGAGTAGTAGTAGCGACGAGACAGATGAGGAGGTGAGAAGGATACCC
ATGCCGAGGGATACGCCTCCGCCTATCCCGCGACAGTATCGGAAGGGAGG
GCCAGGAGAGGCTGCAGGTGGTGGTCGGGGCCCGCACGCTCTTCCGGCGA
AACCGCCCGTCGTTGAGGCGAAGACTGTGTACGAGGCCAAGCCGGAGATC
AGGAATCTCCGACAAGAGGCGATCAATAAGTTCGTTCCTGCAGCCGTCAG
GGTTAAACAGGAAGCTATTCGGGGACAAGGCAAGCTCTTGGAACCGGAGG
AGATGGATCGGCTGGAGCAAGCAGGGTATAATGCTGGGCCTGCAGAAGGC
GAGGAGAAAGTTTCATCAGCTGCACCAGCTGATGATGAGGACGCTCAACG
GCGACTCTTGGAAGAGGAGGAGAGGCGGTTTAATCAGGAGCTTCGGTCCG
TGCAGATCGAAGAGGTGGAGGATGAGGATGCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003276KJC3_003276Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003276-T1KJC3_003276-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003276-T1.cdsKJC3_003276-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003276-T1.utr3p1KJC3_003276-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003276-T1.exon2KJC3_003276-T1.exon2Aspergillus niger KJC3exon
KJC3_003276-T1.exon1KJC3_003276-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003276-T1.utr5p2KJC3_003276-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_003276-T1.utr5p1KJC3_003276-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR019007
DBxrefPFAM:PF09429
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1507257..1509227 -
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