|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1528510..1530708+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003284-T2 ID=KJC3_003284-T2|Name=KJC3_003284-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2199bp|location=Sequence derived from alignment at ch3:1528510..1530708+ (Aspergillus niger KJC3)
GGCATCTCTTGGTGTCTGACATTGCATGTACCATAGGCAAACCACACATC
ATCACCTATACAAAAGCACTTTAAAGTAACATAGATCAAGGTCTCTGCCA
ATTCCCCCACCATGGACTCACTGACTAATCGGAGACCAATGGCAGAATTC
TTCAATGATGAACAGCCATCTCTTGTAAAGAGACACATTCCCACTAAAAC
TGGAGATAGAGCCAGTCATCTGCATCTGTGGCAAGGAGCTGCATTTCCTT
GTCAGTCAGTTACACCGATATAAGCCACATATACTTCCAATCACCAAACA
ATGACTGGAAACAAAAGAAAGAATCCGCGAGACTTGACTCGTCTCTCCGG
AAAACCACTTGCGGAGACTCTCGAGCCATCTTCGATTTTGGCAAGCAGCA
CAGAAGAATGGGTCACCTCTCAAGACCTGGCTGAGCATGGTCTCCCGTTC
AAGCCGGAAGTCATCCAAGATATGACCATCTTCCTCCTGGCAAACCCGAA
TATGAGCTCAACCCATCTATACCGGGCAGACATCCTCTTCGACAGCTGGG
GTTCACTGCGAACACCGCAACAGAAAGAGCAGTCCTTCGCTCAGAATGGG
AACAGCAATCTGGAGACGGCTGAAGAGCATGTGGAACCCATCACCGCAAG
GCAAATCCCCAATTTCACTCTCACCAGAACGGTCGTGAGGAGACTCATTC
CCAGGAACCCGAACCTGGACAGGGTCATGGACCAAACATGTCACTTCTAC
GAACACATCAACGAGTCCACAGACACAAACGAGGAGTCTATTAACCGATA
CCTCGCTGTCTATACCCCCCACGTCACCTCCAAAGAAGACATGCCCTTCT
ACCACCCTCTCCTCCGTTCCCTAGCTTTCCTATACGACTACAACACTCAC
AACAACACATCAGAACCCTCCCCTAACCCCGGCACCATGTCCATTCACTT
CCTCCTCTTCCCCAACGAACCCATCCAAAACCGTCTAGAACGCACCCTAC
AAGCCCTCCTGACTATCCAAATCCGCCTCGCCCGCGGCACCCGTCTAACC
GGCAAACCAGAAGGGGGCGGCGGCGCCAGTCAAAACCCAGCCAAAGACAA
CGTGATCCCTCAGCACCTAGTGCAAAACACTTACACGCGTCTGAAGGCAA
AGTACGCCGCAGAGCTCTGCCAAAACTGGGTCGAGAGCACCGAGCCCTCC
AAGCATGTCTTCGAAGACCTCGCAATCACCGCATTCCTCATTGAACTCTG
GAGAAGCATGTACGGCGCTGTCCCAGCAGACGAGCAAACCTCCTCCCCAT
CTACCTCCTCTTTCCCCGGCTTCGTCGACGTAGCCTGTGGCAACGGCGTC
CTCGTCTACGTCCTGCTCATGGAAGGCTACAAAGGCTGGGGCTTCGACGC
CCGCCGACGCAAAACATGGAGCATATTTCCAGAGTCCGTGCAATCACGAC
TCACAGAGGAGATCTACATCCCAAAACCATTCTCCGAAACGAACCCCTCT
CTGCTCCAAGAGCTCACCATAAAATCCCACTCGGGGTCCTTCCCAAAAGA
CACATTCATTATCTCCAACCACGCAGATGAACTCACCGTCTGGACTCCGC
TCATGGCTACGCTCCTTTGTCCCGAGTCGCCATCACCCTTTATCGCTATC
CCATGCTGCTCGCATTCGCTCTCTGGAGCGAGATTCCGGTATCCGCCTCC
TAAGGCGGGCAAGAAAAAGGAGAAATCAGACAAAGAAGACGAAGGAGGAA
TGGAAGAAGAGACCAATCCATCATCAGGAGACCTCAAATCCCTCCGGAAG
GAGAAACAGGATGCTCAGACCACGGAAGCAGGGTTCCTTAAGTCAATGTA
TGGTTCGTTGACGGCGAAGACGATGAGTGTGGCGGAGGAAATCGGGTACG
AGGTGGAGAGGACGCTGTTGCGGATTCCTAGTACGAGGAATATGGCTGTT
ATTGGAGGAAGAAGGCGGACGACACAGGTGTGGAAGGAGAGGGGAAGTGG
ATTGGTTGATGGTGGTGGTGGTGACGGAGAAGTAGTCCTGGAGCGGGTTA
TGGATGCTGTAAGGCGGGAGTGTTCGCGTGAGGGGGGCGTTGAGGCTGCT
GGGAAGATCTGGATTGAGAGGGCGAAGGGGTTGAATAAGGGGTCTGGGAT
GGGGAAACAGGGTGGGCATTGAACATGCTTGTGTTGTGAAAAGTGTAGC back to topCoding sequence (CDS) from alignment at ch3:1528510..1530708+ >KJC3_003284-T2 ID=KJC3_003284-T2|Name=KJC3_003284-T2|organism=Aspergillus niger KJC3|type=CDS|length=1701bp|location=Sequence derived from alignment at ch3:1528510..1530708+ (Aspergillus niger KJC3)
ATGACCATCTTCCTCCTGGCAAACCCGAATATGAGCTCAACCCATCTATA
CCGGGCAGACATCCTCTTCGACAGCTGGGGTTCACTGCGAACACCGCAAC
AGAAAGAGCAGTCCTTCGCTCAGAATGGGAACAGCAATCTGGAGACGGCT
GAAGAGCATGTGGAACCCATCACCGCAAGGCAAATCCCCAATTTCACTCT
CACCAGAACGGTCGTGAGGAGACTCATTCCCAGGAACCCGAACCTGGACA
GGGTCATGGACCAAACATGTCACTTCTACGAACACATCAACGAGTCCACA
GACACAAACGAGGAGTCTATTAACCGATACCTCGCTGTCTATACCCCCCA
CGTCACCTCCAAAGAAGACATGCCCTTCTACCACCCTCTCCTCCGTTCCC
TAGCTTTCCTATACGACTACAACACTCACAACAACACATCAGAACCCTCC
CCTAACCCCGGCACCATGTCCATTCACTTCCTCCTCTTCCCCAACGAACC
CATCCAAAACCGTCTAGAACGCACCCTACAAGCCCTCCTGACTATCCAAA
TCCGCCTCGCCCGCGGCACCCGTCTAACCGGCAAACCAGAAGGGGGCGGC
GGCGCCAGTCAAAACCCAGCCAAAGACAACGTGATCCCTCAGCACCTAGT
GCAAAACACTTACACGCGTCTGAAGGCAAAGTACGCCGCAGAGCTCTGCC
AAAACTGGGTCGAGAGCACCGAGCCCTCCAAGCATGTCTTCGAAGACCTC
GCAATCACCGCATTCCTCATTGAACTCTGGAGAAGCATGTACGGCGCTGT
CCCAGCAGACGAGCAAACCTCCTCCCCATCTACCTCCTCTTTCCCCGGCT
TCGTCGACGTAGCCTGTGGCAACGGCGTCCTCGTCTACGTCCTGCTCATG
GAAGGCTACAAAGGCTGGGGCTTCGACGCCCGCCGACGCAAAACATGGAG
CATATTTCCAGAGTCCGTGCAATCACGACTCACAGAGGAGATCTACATCC
CAAAACCATTCTCCGAAACGAACCCCTCTCTGCTCCAAGAGCTCACCATA
AAATCCCACTCGGGGTCCTTCCCAAAAGACACATTCATTATCTCCAACCA
CGCAGATGAACTCACCGTCTGGACTCCGCTCATGGCTACGCTCCTTTGTC
CCGAGTCGCCATCACCCTTTATCGCTATCCCATGCTGCTCGCATTCGCTC
TCTGGAGCGAGATTCCGGTATCCGCCTCCTAAGGCGGGCAAGAAAAAGGA
GAAATCAGACAAAGAAGACGAAGGAGGAATGGAAGAAGAGACCAATCCAT
CATCAGGAGACCTCAAATCCCTCCGGAAGGAGAAACAGGATGCTCAGACC
ACGGAAGCAGGGTTCCTTAAGTCAATGTATGGTTCGTTGACGGCGAAGAC
GATGAGTGTGGCGGAGGAAATCGGGTACGAGGTGGAGAGGACGCTGTTGC
GGATTCCTAGTACGAGGAATATGGCTGTTATTGGAGGAAGAAGGCGGACG
ACACAGGTGTGGAAGGAGAGGGGAAGTGGATTGGTTGATGGTGGTGGTGG
TGACGGAGAAGTAGTCCTGGAGCGGGTTATGGATGCTGTAAGGCGGGAGT
GTTCGCGTGAGGGGGGCGTTGAGGCTGCTGGGAAGATCTGGATTGAGAGG
GCGAAGGGGTTGAATAAGGGGTCTGGGATGGGGAAACAGGGTGGGCATTG
A back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008168 | methyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003284-T2.utr3p1 | KJC3_003284-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092614DJ |
| DBxref | InterPro:IPR011671 |
| DBxref | PFAM:PF07757 |
| Product | variant 2 |
| Product | tRNA(Ser) Um(44) 2'-O-methyltransferase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1528510..1530708 + |
|
