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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1530744..1533148- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003285-T1 ID=KJC3_003285-T1|Name=KJC3_003285-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2405bp|location=Sequence derived from alignment at ch3:1530744..1533148- (Aspergillus niger KJC3)
GATGAGTGCTGGTCGTCATTCTGGTCGGTGAAGCCATAGTACAAGGCAGA
GATGCTGTCTCCGTCGTCTATGAAGCCTTCAGCTCCGTCAGCATCTCTTC
TTCGGTTTCTGCGATCACAATCCGATTCCTTTTTCTTCACAGCCAACCCA
ACTACTTGCGGACGATCTCTCAATAATGATCCCCAGCTTCATCATCAGCA
TCACGCCTTTTCGCTAAGCAGGACGTCGGAATGGACGCATATAAATCCTG
CACCATGCCGTGCAAGCCTGGAATCATGCTTGTTACCCTTTCCGGGCCTC
TCGACTAGAACTCGCGGTACTTTACGATGTCGGGCGTCGCTGGCTCAACG
CTCTTCACCGAGTCCGTTTTTCCTCCCTAATGCGCAGTCTACGCGCGCAT
CATCCACCAAGAGCAAGAGCTTGTGGCGTAGGCTCTTTGACTTCAAGCGA
AACAAAGCTGCCGAATCTAAATCATATCTCCGCCAGCCACCTGCACTGAT
CAATGACGGAACGGAGGGAAGCTTTAATATTGGCCGCGGATTAGTGGCAA
AGGCATCTAATGAGCCGCGCCTGCGATGTACTGAATTCGACAGCACTGGG
AATGTGACTCTAGTAAATGGCGAATTCAAGAAAAGTGAGCTGATTGCCAA
GGTCAGTATCGGTGGCTCTTCGAATCGCTTCATCTTAGGAAGTGACACAT
GACTGATTTCAAGCATAGTATGGTCTCCTGCCTCGGGACTTGCGAAAAAT
CGACTCGTCTACTCTGCCTCATATCTTAGTGCGACCGCGCGCCATTCTCA
TCAATCTCCTACACCTCCGAGTCTTGATCAAGGCTGATCGCGTTCTCGTG
TTCGATGCGTACGGATCCACGGACTCATACATGCAGTCCCTATTTGTGTA
TGACCTTGAAGGAAAGCTACAACAGAAACAAGGGCAGACTGCGGGTGCGT
TGCCTTACGAATTCCGAGCGCTGGAAGCGGTCTTGATCAGTGTCACAAGT
GGCCTGGAGGAGGAATTCAACGGTGTCAGAGATCCAGTTGTGAGCGTGCT
TAGGGCTCTGGAAGAGGACATTGACCGCGACAAGCTCCGTCATCTGCTTA
TTTACTCCAAGAAACTCGGCACGTTCGAACAAAAGGCTCGCCTCGTGCGT
GATGCGATCGACGACCTGCTGGAGGCTGACGACGACCTGGCCGCAATGTA
TCTTACTGAGAACTCGAAGGGTGTCCGACGCGAGGAACACGAACATCAAG
AAGTCGAGATGCTACTGGAGTCATACCACAAAGTTTGCGACGAAATTGTG
CAGGCCAGCGGCAACTTGGTGACTGGAATCCGCAATACCGAGGAAGTGTA
AGTTATTCACAGTGTCCCAGATGGTTGTCCTGTAACTGGATACTGACCTA
AACTACAGCGTTAAAGCCATCCTGGATGCCAATCGCAACTCCCTCATGCT
TCTGGACCTCAAATTCAGCATCGGAACGCTCGGACTCGCAACCGGAACCC
TGTTTTCCGCACTTTACGGAATGAACTTGAAGAATTTCATCGAAGAGTCG
GACTTGGGTTTTGGCGCCGTGTCCGTTACATGCTTTGCCATTACGATTGT
TGTCTGTGTCTATGGGCTCGCCAAACTGCGCAAGCTTCAGCGTGTCCGCA
TGTGGGGCGAATCCGGCGTCGGCGGTGCATCCATGGTTTCTCTCCCTACC
AGAGGCGGCGCGCTCGCCAGCCATCGGCCAAATTGGCGCGCGGACACCGT
TGAGCCTGTCTGGGGCAGTCTCCCTGGTGAAGGGCGCGTGGAGAGGATCA
AGCGTATCAAAGACAATGCAGCTGCAGCTGCAGCCCGATCTGCAACCCTT
AAGGGTGCTAATGTGCCCCCAACGTCGTCCGGAGAAGCTACCAAGCAGTC
AGAGAGTTCTTAGACCATAATTTGTCACACTAATAATCAGTGGGATCTCA
TAGAGCATCGCTACTATCAAAATCTGACCTACTCGGCTCTTCTCTACAGT
CCTGGCCTGACCATCATCCCTGTTGTTGCGGTTGTGGTGCTATGGCTCAG
GCATTCGACCACGAAGTTTATCCATTAGAGCTTATAGAACCGCATGGCAG
GAGTTCGGCATCTGGTTTGTATTCTGATCTTATATTACTTTTGGGTCTAT
TTTTCAGCTAGTACTGCCCTCCACTTCATGGGGAGATCCTGTATCTAGCT
TGATATACTTACCACACTCAACTCACTCACGGGTTTCTTATTTCATGGGA
GCTAAATCTGCTCTGTAATGTGTCTATAGACTATAGATGTCGAATTGGAC
ACCGACAATGTTACATACAGATGTACATTTACAACAATTAACATCATCAT
GTCTTTTTCTTCCATGTACATAGACGAAACATTTATCTAATGTGCATTTT
CAAGT back to topCoding sequence (CDS) from alignment at ch3:1530744..1533148- >KJC3_003285-T1 ID=KJC3_003285-T1|Name=KJC3_003285-T1|organism=Aspergillus niger KJC3|type=CDS|length=5202bp|location=Sequence derived from alignment at ch3:1530744..1533148- (Aspergillus niger KJC3)
CGTTAAAGCCATCCTGGATGCCAATCGCAACTCCCTCATGCTTCTGGACC
TCAAATTCAGCATCGGAACGCTCGGACTCGCAACCGGAACCCTGTTTTCC
GCACTTTACGGAATGAACTTGAAGAATTTCATCGAAGAGTCGGACTTGGG
TTTTGGCGCCGTGTCCGTTACATGCTTTGCCATTACGATTGTTGTCTGTG
TCTATGGGCTCGCCAAACTGCGCAAGCTTCAGCGTGTCCGCATGTGGGGC
GAATCCGGCGTCGGCGGTGCATCCATGGTTTCTCTCCCTACCAGAGGCGG
CGCGCTCGCCAGCCATCGGCCAAATTGGCGCGCGGACACCGTTGAGCCTG
TCTGGGGCAGTCTCCCTGGTGAAGGGCGCGTGGAGAGGATCAAGCGTATC
AAAGACAATGCAGCTGCAGCTGCAGCCCGATCTGCAACCCTTAAGGGTGC
TAATGTGCCCCCAACGTCGTCCGGAGAAGCTACCAAGCAGTCAGAGAGTT
CTTAGTATGGTCTCCTGCCTCGGGACTTGCGAAAAATCGACTCGTCTACT
CTGCCTCATATCTTAGTGCGACCGCGCGCCATTCTCATCAATCTCCTACA
CCTCCGAGTCTTGATCAAGGCTGATCGCGTTCTCGTGTTCGATGCGTACG
GATCCACGGACTCATACATGCAGTCCCTATTTGTGTATGACCTTGAAGGA
AAGCTACAACAGAAACAAGGGCAGACTGCGGGTGCGTTGCCTTACGAATT
CCGAGCGCTGGAAGCGGTCTTGATCAGTGTCACAAGTGGCCTGGAGGAGG
AATTCAACGGTGTCAGAGATCCAGTTGTGAGCGTGCTTAGGGCTCTGGAA
GAGGACATTGACCGCGACAAGCTCCGTCATCTGCTTATTTACTCCAAGAA
ACTCGGCACGTTCGAACAAAAGGCTCGCCTCGTGCGTGATGCGATCGACG
ACCTGCTGGAGGCTGACGACGACCTGGCCGCAATGTATCTTACTGAGAAC
TCGAAGGGTGTCCGACGCGAGGAACACGAACATCAAGAAGTCGAGATGCT
ACTGGAGTCATACCACAAAGTTTGCGACGAAATTGTGCAGGCCAGCGGCA
ACTTGGTGACTGGAATCCGCAATACCGAGGAAGTATGCTGTCTCCGTCGT
CTATGAAGCCTTCAGCTCCGTCAGCATCTCTTCTTCGGTTTCTGCGATCA
CAATCCGATTCCTTTTTCTTCACAGCCAACCCAACTACTTGCGGACGATC
TCTCAATAATGATCCCCAGCTTCATCATCAGCATCACGCCTTTTCGCTAA
GCAGGACGTCGGAATGGACGCATATAAATCCTGCACCATGCCGTGCAAGC
CTGGAATCATGCTTGTTACCCTTTCCGGGCCTCTCGACTAGAACTCGCGG
TACTTTACGATGTCGGGCGTCGCTGGCTCAACGCTCTTCACCGAGTCCGT
TTTTCCTCCCTAATGCGCAGTCTACGCGCGCATCATCCACCAAGAGCAAG
AGCTTGTGGCGTAGGCTCTTTGACTTCAAGCGAAACAAAGCTGCCGAATC
TAAATCATATCTCCGCCAGCCACCTGCACTGATCAATGACGGAACGGAGG
GAAGCTTTAATATTGGCCGCGGATTAGTGGCAAAGGCATCTAATGAGCCG
CGCCTGCGATGTACTGAATTCGACAGCACTGGGAATGTGACTCTAGTAAA
TGGCGAATTCAAGAAAAGTGAGCTGATTGCCAAGCGTTAAAGCCATCCTG
GATGCCAATCGCAACTCCCTCATGCTTCTGGACCTCAAATTCAGCATCGG
AACGCTCGGACTCGCAACCGGAACCCTGTTTTCCGCACTTTACGGAATGA
ACTTGAAGAATTTCATCGAAGAGTCGGACTTGGGTTTTGGCGCCGTGTCC
GTTACATGCTTTGCCATTACGATTGTTGTCTGTGTCTATGGGCTCGCCAA
ACTGCGCAAGCTTCAGCGTGTCCGCATGTGGGGCGAATCCGGCGTCGGCG
GTGCATCCATGGTTTCTCTCCCTACCAGAGGCGGCGCGCTCGCCAGCCAT
CGGCCAAATTGGCGCGCGGACACCGTTGAGCCTGTCTGGGGCAGTCTCCC
TGGTGAAGGGCGCGTGGAGAGGATCAAGCGTATCAAAGACAATGCAGCTG
CAGCTGCAGCCCGATCTGCAACCCTTAAGGGTGCTAATGTGCCCCCAACG
TCGTCCGGAGAAGCTACCAAGCAGTCAGAGAGTTCTTAGTATGGTCTCCT
GCCTCGGGACTTGCGAAAAATCGACTCGTCTACTCTGCCTCATATCTTAG
TGCGACCGCGCGCCATTCTCATCAATCTCCTACACCTCCGAGTCTTGATC
AAGGCTGATCGCGTTCTCGTGTTCGATGCGTACGGATCCACGGACTCATA
CATGCAGTCCCTATTTGTGTATGACCTTGAAGGAAAGCTACAACAGAAAC
AAGGGCAGACTGCGGGTGCGTTGCCTTACGAATTCCGAGCGCTGGAAGCG
GTCTTGATCAGTGTCACAAGTGGCCTGGAGGAGGAATTCAACGGTGTCAG
AGATCCAGTTGTGAGCGTGCTTAGGGCTCTGGAAGAGGACATTGACCGCG
ACAAGCTCCGTCATCTGCTTATTTACTCCAAGAAACTCGGCACGTTCGAA
CAAAAGGCTCGCCTCGTGCGTGATGCGATCGACGACCTGCTGGAGGCTGA
CGACGACCTGGCCGCAATGTATCTTACTGAGAACTCGAAGGGTGTCCGAC
GCGAGGAACACGAACATCAAGAAGTCGAGATGCTACTGGAGTCATACCAC
AAAGTTTGCGACGAAATTGTGCAGGCCAGCGGCAACTTGGTGACTGGAAT
CCGCAATACCGAGGAAGTATGCTGTCTCCGTCGTCTATGAAGCCTTCAGC
TCCGTCAGCATCTCTTCTTCGGTTTCTGCGATCACAATCCGATTCCTTTT
TCTTCACAGCCAACCCAACTACTTGCGGACGATCTCTCAATAATGATCCC
CAGCTTCATCATCAGCATCACGCCTTTTCGCTAAGCAGGACGTCGGAATG
GACGCATATAAATCCTGCACCATGCCGTGCAAGCCTGGAATCATGCTTGT
TACCCTTTCCGGGCCTCTCGACTAGAACTCGCGGTACTTTACGATGTCGG
GCGTCGCTGGCTCAACGCTCTTCACCGAGTCCGTTTTTCCTCCCTAATGC
GCAGTCTACGCGCGCATCATCCACCAAGAGCAAGAGCTTGTGGCGTAGGC
TCTTTGACTTCAAGCGAAACAAAGCTGCCGAATCTAAATCATATCTCCGC
CAGCCACCTGCACTGATCAATGACGGAACGGAGGGAAGCTTTAATATTGG
CCGCGGATTAGTGGCAAAGGCATCTAATGAGCCGCGCCTGCGATGTACTG
AATTCGACAGCACTGGGAATGTGACTCTAGTAAATGGCGAATTCAAGAAA
AGTGAGCTGATTGCCAAGCGTTAAAGCCATCCTGGATGCCAATCGCAACT
CCCTCATGCTTCTGGACCTCAAATTCAGCATCGGAACGCTCGGACTCGCA
ACCGGAACCCTGTTTTCCGCACTTTACGGAATGAACTTGAAGAATTTCAT
CGAAGAGTCGGACTTGGGTTTTGGCGCCGTGTCCGTTACATGCTTTGCCA
TTACGATTGTTGTCTGTGTCTATGGGCTCGCCAAACTGCGCAAGCTTCAG
CGTGTCCGCATGTGGGGCGAATCCGGCGTCGGCGGTGCATCCATGGTTTC
TCTCCCTACCAGAGGCGGCGCGCTCGCCAGCCATCGGCCAAATTGGCGCG
CGGACACCGTTGAGCCTGTCTGGGGCAGTCTCCCTGGTGAAGGGCGCGTG
GAGAGGATCAAGCGTATCAAAGACAATGCAGCTGCAGCTGCAGCCCGATC
TGCAACCCTTAAGGGTGCTAATGTGCCCCCAACGTCGTCCGGAGAAGCTA
CCAAGCAGTCAGAGAGTTCTTAGTATGGTCTCCTGCCTCGGGACTTGCGA
AAAATCGACTCGTCTACTCTGCCTCATATCTTAGTGCGACCGCGCGCCAT
TCTCATCAATCTCCTACACCTCCGAGTCTTGATCAAGGCTGATCGCGTTC
TCGTGTTCGATGCGTACGGATCCACGGACTCATACATGCAGTCCCTATTT
GTGTATGACCTTGAAGGAAAGCTACAACAGAAACAAGGGCAGACTGCGGG
TGCGTTGCCTTACGAATTCCGAGCGCTGGAAGCGGTCTTGATCAGTGTCA
CAAGTGGCCTGGAGGAGGAATTCAACGGTGTCAGAGATCCAGTTGTGAGC
GTGCTTAGGGCTCTGGAAGAGGACATTGACCGCGACAAGCTCCGTCATCT
GCTTATTTACTCCAAGAAACTCGGCACGTTCGAACAAAAGGCTCGCCTCG
TGCGTGATGCGATCGACGACCTGCTGGAGGCTGACGACGACCTGGCCGCA
ATGTATCTTACTGAGAACTCGAAGGGTGTCCGACGCGAGGAACACGAACA
TCAAGAAGTCGAGATGCTACTGGAGTCATACCACAAAGTTTGCGACGAAA
TTGTGCAGGCCAGCGGCAACTTGGTGACTGGAATCCGCAATACCGAGGAA
GTATGCTGTCTCCGTCGTCTATGAAGCCTTCAGCTCCGTCAGCATCTCTT
CTTCGGTTTCTGCGATCACAATCCGATTCCTTTTTCTTCACAGCCAACCC
AACTACTTGCGGACGATCTCTCAATAATGATCCCCAGCTTCATCATCAGC
ATCACGCCTTTTCGCTAAGCAGGACGTCGGAATGGACGCATATAAATCCT
GCACCATGCCGTGCAAGCCTGGAATCATGCTTGTTACCCTTTCCGGGCCT
CTCGACTAGAACTCGCGGTACTTTACGATGTCGGGCGTCGCTGGCTCAAC
GCTCTTCACCGAGTCCGTTTTTCCTCCCTAATGCGCAGTCTACGCGCGCA
TCATCCACCAAGAGCAAGAGCTTGTGGCGTAGGCTCTTTGACTTCAAGCG
AAACAAAGCTGCCGAATCTAAATCATATCTCCGCCAGCCACCTGCACTGA
TCAATGACGGAACGGAGGGAAGCTTTAATATTGGCCGCGGATTAGTGGCA
AAGGCATCTAATGAGCCGCGCCTGCGATGTACTGAATTCGACAGCACTGG
GAATGTGACTCTAGTAAATGGCGAATTCAAGAAAAGTGAGCTGATTGCCA
AG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003285-T1.utr3p1 | KJC3_003285-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003285-T1.utr5p1 | KJC3_003285-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR039204 |
| DBxref | PFAM:PF01544 |
| Product | magnesium ion transporter |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1530744..1533148 - |
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