|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1533985..1536944- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003286-T1 ID=KJC3_003286-T1|Name=KJC3_003286-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2960bp|location=Sequence derived from alignment at ch3:1533985..1536944- (Aspergillus niger KJC3)
CGCGGCGTTAGTGGACTTTAGTGGCTCTCCGTCGCTCTCTCCCGCCAACG
CTCCTCTTCCGGCTACTTGACCTCTTCTCCCTCCTCCCCTCCCCCAAAGC
CACACTTGCTCGGCCACCAATCCTACACTCTCACGGCCTTTCTGTTATAG
ATAGAGCCTAACTAGTATTCGCTCATTTCTTTCGCGTCCTTAGGGTAGCC
CTCCATTCACCCGCCTACCCCACAAATCCTGGGAATTTCGACCCCCCTTT
GTCTCAGACACATCCGTTGTTGCCGCGCCGTATCAGCTCTTATCCGTGCC
TGAGGAGCAACCACCCTCTGGTAATCCGGACTCACTAAGTTACACCAGAC
ACCCTGCAATGCGCCTCCAGCAGGCGATCTAATTATTCCTACCTCACCGG
TCATAATTCGCAAGCTATTAACTCGGTGTCTTCGTGTATCGATCCAGCGC
TATGCCTTCAATCCTGAACGACAACGACAAGGAAACAGTCAGGAGAACTG
TACCAAAGCCTGACAACAAAATCTTAGCGGTGGCTGTTGCGCGCCTCTAC
GTGGCCCACCCAGACACCCAGAGATGGACGTACACTGGCCTGCAGGGAGC
TGCAGTTTTAGCAAATGACCTGGTCGGCCGTACCTTTTGGCTGAAATTGG
TGGATGTATCGGTGAGCACAGCCTGGTAAATCATGCACTGTGACAGTTAC
TGACAGAAGACACCGTGCTGTGCTTTAGCCTGCCAATAGGGGAGTTATTT
GGGATCAAGAGATCTACGATAACTTCGCGTACAACCAAGATCGCACGTTC
TTCCACTCCTTCGAATTAGAAGACTGTCCCGCCGGACTGTCATTCGCCGA
TGAGAAAGAGGCCAAGACATTCATCAAGAAAGTACAGGAACGAGAAAAAC
ATGCGAGCAAAGAGACACGGCAGACGCCCTTTGCATCTACCCGAGGCCAG
GGCCCTGCTCCGGTGGTGAACGGCAAATCCGGGGTTGGACGATCGCTGTT
TGGCAGCTTACTCGGCCATCGCTCATCGTCAGGATCTCATGTACCCCCGC
CGGTGACACCTGCGGAACTGCCTCCTGCTCCCTCGATCCAAGTGGCTCCC
CCGCCTCCACCTTCGGCCAGCCCAGCACGCAAGGAACTGCCGTTCGACAC
CAATGACCCTGCATTCAAGGGCGTCCTGGACGAGCTCCTACAAATGGGCA
TTACGGAAGACTTGATCGCCGAGAACTTCGATTTCATCAAGTCCTATATC
GAACAGAAACAAGCGGCAACGCCCAGCCCGCCTTCTGCCGATGATCAAAG
GAAAGGAAAAGCGCCGCCTCCACCTCCCCCGTCTGCGCCGCCTGCTCCGA
AGGTGGCTGCCATCAGCCCACAGAACACTGGCAACAGCACAGGGAGTCGA
CGAGGTGCTCCGCCGCCCCCTCCTCCGACGAGGAGGACTCGAATGGATAC
GACGGATGACGAGCCTGCCTCGAAACGTGAACCGTCTCCTCCCAGGAACC
GGTTTCGTGCGCCGCCTCCAATTGCAGATGCTGGTAAATTTGCTCACACA
CCATTGCCGCCTACTCGCCAACGGGCCTCGTCAAATGCTACACCCGGTCC
TCCACCTCCTCCACGGCCTCCAAAGACTCCAATGGATGAGAACCACTCCC
GCTTCGGCGTTCCCCCGCCGTTCCAGGGCGAGCGCAAGGTGTCTGCTCCT
CCCGCACCTCCCAGTCGGCCAGGGCCTTCAGGGCCTCCTCCTCCTCCTCC
ACGCACTATGAGCCCTGTGCCACCTCCACAGCTACCTCCCAAAGTTCCCA
ATGTTTCTGCAACAGGACCTCCTCCACCACCACCCAGAAGCCCTGCTTCG
CAGCCGCCACCACCCCCACCTGTGCCTTCCAATTCCCGGCCTATTCCTCC
CCCACCTACATCAAGCGTGTCGCCTCCTTCGTCGGGTCTTCCGCCCCGGC
CTCCTCTGCCAATTGGTATTCCTCCACCTGGACCTCCGCCATCGCATCCT
TCACCTAGTGCCGGACCTCCTGCACCGCCTCCGCCCCCACCGCCGCCCAC
AACCTCGGTCCCGCCTCCTCCACCCCCTCCGCCTCCGGCAAGCACTGGTC
CTCCAGCACCCCCACCGCCTCCGCCGGCACCAGGAAGTTCAATCCCACCA
CCACCACCTCCTCCACCGCCAGGAGCTGGTGCTCCACCGCCGCCACCGCC
GCCTCCTGGAGCTGGTGCGCCTCCCCCGCCTCCTCCAGGTGGAGCTGCTC
CGCCCTTGCCCAAAGCCGAAGGTGGTAGGAATGACCTCATGGCTGCCATC
CGGGCATCTGGAGGAAAGGGCGGCGGTGGCCTGCGGAGGGTCAAGGATAC
AGAGAAGCGTGACCGGAGTGCAGCCCTTGTACCTGGCTCAGCCAGCGAAT
CGTCTGCGCCGACCCCAAGTGGTGGTGCTGCTCAAGGAGGCCTGGCAGGT
GCTTTGCAAGATGCTCTGGCGAAGAGAAAGCAGAAGGTCAGCGGTAGCGG
TAAGTAGACACCCCCTGATGGCCAGTGATACGCGTACTAATGTGGACTAT
AGATGACGAGAAGGAGGACGATGACGATTGGTGAGCCATGCTTGAGGGCA
CTTTATCATTTTTCCTAAAACTCGTATTGTTGCCGTGGCTTAGACATGTT
GGATTTTGTGTGATACCTCCGTCGTGCAGCCTCAATATTCTTTCCTGTTC
TTAGCATATATTCCCATCCGGTGCGTGGAGGTGAATGTCTGGTTTTCCTT
TCTAGTCAGCATTTCCTGCAGGTGATCAAAAGTATGCACTGGAGATTGGA
GCTGTCTGACAGCGGGTCCATTCCCTAGTCTCAAGAATGAAACAATGCTT
GTGCATTTGGGAACATAGATCTCAGGCGCTAGTAGATCACTATTACAAGA
TGAGTTTTTCTCATAAACGTGGATATCTCCTAGCATTGTCCGTCCTATCA
GCAGTGGGAC back to topCoding sequence (CDS) from alignment at ch3:1533985..1536944- >KJC3_003286-T1 ID=KJC3_003286-T1|Name=KJC3_003286-T1|organism=Aspergillus niger KJC3|type=CDS|length=6039bp|location=Sequence derived from alignment at ch3:1533985..1536944- (Aspergillus niger KJC3)
ATGACGAGAAGGAGGACGATGACGATTGGTGACCTGCCAATAGGGGAGTT
ATTTGGGATCAAGAGATCTACGATAACTTCGCGTACAACCAAGATCGCAC
GTTCTTCCACTCCTTCGAATTAGAAGACTGTCCCGCCGGACTGTCATTCG
CCGATGAGAAAGAGGCCAAGACATTCATCAAGAAAGTACAGGAACGAGAA
AAACATGCGAGCAAAGAGACACGGCAGACGCCCTTTGCATCTACCCGAGG
CCAGGGCCCTGCTCCGGTGGTGAACGGCAAATCCGGGGTTGGACGATCGC
TGTTTGGCAGCTTACTCGGCCATCGCTCATCGTCAGGATCTCATGTACCC
CCGCCGGTGACACCTGCGGAACTGCCTCCTGCTCCCTCGATCCAAGTGGC
TCCCCCGCCTCCACCTTCGGCCAGCCCAGCACGCAAGGAACTGCCGTTCG
ACACCAATGACCCTGCATTCAAGGGCGTCCTGGACGAGCTCCTACAAATG
GGCATTACGGAAGACTTGATCGCCGAGAACTTCGATTTCATCAAGTCCTA
TATCGAACAGAAACAAGCGGCAACGCCCAGCCCGCCTTCTGCCGATGATC
AAAGGAAAGGAAAAGCGCCGCCTCCACCTCCCCCGTCTGCGCCGCCTGCT
CCGAAGGTGGCTGCCATCAGCCCACAGAACACTGGCAACAGCACAGGGAG
TCGACGAGGTGCTCCGCCGCCCCCTCCTCCGACGAGGAGGACTCGAATGG
ATACGACGGATGACGAGCCTGCCTCGAAACGTGAACCGTCTCCTCCCAGG
AACCGGTTTCGTGCGCCGCCTCCAATTGCAGATGCTGGTAAATTTGCTCA
CACACCATTGCCGCCTACTCGCCAACGGGCCTCGTCAAATGCTACACCCG
GTCCTCCACCTCCTCCACGGCCTCCAAAGACTCCAATGGATGAGAACCAC
TCCCGCTTCGGCGTTCCCCCGCCGTTCCAGGGCGAGCGCAAGGTGTCTGC
TCCTCCCGCACCTCCCAGTCGGCCAGGGCCTTCAGGGCCTCCTCCTCCTC
CTCCACGCACTATGAGCCCTGTGCCACCTCCACAGCTACCTCCCAAAGTT
CCCAATGTTTCTGCAACAGGACCTCCTCCACCACCACCCAGAAGCCCTGC
TTCGCAGCCGCCACCACCCCCACCTGTGCCTTCCAATTCCCGGCCTATTC
CTCCCCCACCTACATCAAGCGTGTCGCCTCCTTCGTCGGGTCTTCCGCCC
CGGCCTCCTCTGCCAATTGGTATTCCTCCACCTGGACCTCCGCCATCGCA
TCCTTCACCTAGTGCCGGACCTCCTGCACCGCCTCCGCCCCCACCGCCGC
CCACAACCTCGGTCCCGCCTCCTCCACCCCCTCCGCCTCCGGCAAGCACT
GGTCCTCCAGCACCCCCACCGCCTCCGCCGGCACCAGGAAGTTCAATCCC
ACCACCACCACCTCCTCCACCGCCAGGAGCTGGTGCTCCACCGCCGCCAC
CGCCGCCTCCTGGAGCTGGTGCGCCTCCCCCGCCTCCTCCAGGTGGAGCT
GCTCCGCCCTTGCCCAAAGCCGAAGGTGGTAGGAATGACCTCATGGCTGC
CATCCGGGCATCTGGAGGAAAGGGCGGCGGTGGCCTGCGGAGGGTCAAGG
ATACAGAGAAGCGTGACCGGAGTGCAGCCCTTGTACCTGGCTCAGCCAGC
GAATCGTCTGCGCCGACCCCAAGTGGTGGTGCTGCTCAAGGAGGCCTGGC
AGGTGCTTTGCAAGATGCTCTGGCGAAGAGAAAGCAGAAGGTCAGCGGTA
GCGATGCCTTCAATCCTGAACGACAACGACAAGGAAACAGTCAGGAGAAC
TGTACCAAAGCCTGACAACAAAATCTTAGCGGTGGCTGTTGCGCGCCTCT
ACGTGGCCCACCCAGACACCCAGAGATGGACGTACACTGGCCTGCAGGGA
GCTGCAGTTTTAGCAAATGACCTGGTCGGCCGTACCTTTTGGCTGAAATT
GGTGGATGTATCGATGACGAGAAGGAGGACGATGACGATTGGTGACCTGC
CAATAGGGGAGTTATTTGGGATCAAGAGATCTACGATAACTTCGCGTACA
ACCAAGATCGCACGTTCTTCCACTCCTTCGAATTAGAAGACTGTCCCGCC
GGACTGTCATTCGCCGATGAGAAAGAGGCCAAGACATTCATCAAGAAAGT
ACAGGAACGAGAAAAACATGCGAGCAAAGAGACACGGCAGACGCCCTTTG
CATCTACCCGAGGCCAGGGCCCTGCTCCGGTGGTGAACGGCAAATCCGGG
GTTGGACGATCGCTGTTTGGCAGCTTACTCGGCCATCGCTCATCGTCAGG
ATCTCATGTACCCCCGCCGGTGACACCTGCGGAACTGCCTCCTGCTCCCT
CGATCCAAGTGGCTCCCCCGCCTCCACCTTCGGCCAGCCCAGCACGCAAG
GAACTGCCGTTCGACACCAATGACCCTGCATTCAAGGGCGTCCTGGACGA
GCTCCTACAAATGGGCATTACGGAAGACTTGATCGCCGAGAACTTCGATT
TCATCAAGTCCTATATCGAACAGAAACAAGCGGCAACGCCCAGCCCGCCT
TCTGCCGATGATCAAAGGAAAGGAAAAGCGCCGCCTCCACCTCCCCCGTC
TGCGCCGCCTGCTCCGAAGGTGGCTGCCATCAGCCCACAGAACACTGGCA
ACAGCACAGGGAGTCGACGAGGTGCTCCGCCGCCCCCTCCTCCGACGAGG
AGGACTCGAATGGATACGACGGATGACGAGCCTGCCTCGAAACGTGAACC
GTCTCCTCCCAGGAACCGGTTTCGTGCGCCGCCTCCAATTGCAGATGCTG
GTAAATTTGCTCACACACCATTGCCGCCTACTCGCCAACGGGCCTCGTCA
AATGCTACACCCGGTCCTCCACCTCCTCCACGGCCTCCAAAGACTCCAAT
GGATGAGAACCACTCCCGCTTCGGCGTTCCCCCGCCGTTCCAGGGCGAGC
GCAAGGTGTCTGCTCCTCCCGCACCTCCCAGTCGGCCAGGGCCTTCAGGG
CCTCCTCCTCCTCCTCCACGCACTATGAGCCCTGTGCCACCTCCACAGCT
ACCTCCCAAAGTTCCCAATGTTTCTGCAACAGGACCTCCTCCACCACCAC
CCAGAAGCCCTGCTTCGCAGCCGCCACCACCCCCACCTGTGCCTTCCAAT
TCCCGGCCTATTCCTCCCCCACCTACATCAAGCGTGTCGCCTCCTTCGTC
GGGTCTTCCGCCCCGGCCTCCTCTGCCAATTGGTATTCCTCCACCTGGAC
CTCCGCCATCGCATCCTTCACCTAGTGCCGGACCTCCTGCACCGCCTCCG
CCCCCACCGCCGCCCACAACCTCGGTCCCGCCTCCTCCACCCCCTCCGCC
TCCGGCAAGCACTGGTCCTCCAGCACCCCCACCGCCTCCGCCGGCACCAG
GAAGTTCAATCCCACCACCACCACCTCCTCCACCGCCAGGAGCTGGTGCT
CCACCGCCGCCACCGCCGCCTCCTGGAGCTGGTGCGCCTCCCCCGCCTCC
TCCAGGTGGAGCTGCTCCGCCCTTGCCCAAAGCCGAAGGTGGTAGGAATG
ACCTCATGGCTGCCATCCGGGCATCTGGAGGAAAGGGCGGCGGTGGCCTG
CGGAGGGTCAAGGATACAGAGAAGCGTGACCGGAGTGCAGCCCTTGTACC
TGGCTCAGCCAGCGAATCGTCTGCGCCGACCCCAAGTGGTGGTGCTGCTC
AAGGAGGCCTGGCAGGTGCTTTGCAAGATGCTCTGGCGAAGAGAAAGCAG
AAGGTCAGCGGTAGCGATGCCTTCAATCCTGAACGACAACGACAAGGAAA
CAGTCAGGAGAACTGTACCAAAGCCTGACAACAAAATCTTAGCGGTGGCT
GTTGCGCGCCTCTACGTGGCCCACCCAGACACCCAGAGATGGACGTACAC
TGGCCTGCAGGGAGCTGCAGTTTTAGCAAATGACCTGGTCGGCCGTACCT
TTTGGCTGAAATTGGTGGATGTATCGATGACGAGAAGGAGGACGATGACG
ATTGGTGACCTGCCAATAGGGGAGTTATTTGGGATCAAGAGATCTACGAT
AACTTCGCGTACAACCAAGATCGCACGTTCTTCCACTCCTTCGAATTAGA
AGACTGTCCCGCCGGACTGTCATTCGCCGATGAGAAAGAGGCCAAGACAT
TCATCAAGAAAGTACAGGAACGAGAAAAACATGCGAGCAAAGAGACACGG
CAGACGCCCTTTGCATCTACCCGAGGCCAGGGCCCTGCTCCGGTGGTGAA
CGGCAAATCCGGGGTTGGACGATCGCTGTTTGGCAGCTTACTCGGCCATC
GCTCATCGTCAGGATCTCATGTACCCCCGCCGGTGACACCTGCGGAACTG
CCTCCTGCTCCCTCGATCCAAGTGGCTCCCCCGCCTCCACCTTCGGCCAG
CCCAGCACGCAAGGAACTGCCGTTCGACACCAATGACCCTGCATTCAAGG
GCGTCCTGGACGAGCTCCTACAAATGGGCATTACGGAAGACTTGATCGCC
GAGAACTTCGATTTCATCAAGTCCTATATCGAACAGAAACAAGCGGCAAC
GCCCAGCCCGCCTTCTGCCGATGATCAAAGGAAAGGAAAAGCGCCGCCTC
CACCTCCCCCGTCTGCGCCGCCTGCTCCGAAGGTGGCTGCCATCAGCCCA
CAGAACACTGGCAACAGCACAGGGAGTCGACGAGGTGCTCCGCCGCCCCC
TCCTCCGACGAGGAGGACTCGAATGGATACGACGGATGACGAGCCTGCCT
CGAAACGTGAACCGTCTCCTCCCAGGAACCGGTTTCGTGCGCCGCCTCCA
ATTGCAGATGCTGGTAAATTTGCTCACACACCATTGCCGCCTACTCGCCA
ACGGGCCTCGTCAAATGCTACACCCGGTCCTCCACCTCCTCCACGGCCTC
CAAAGACTCCAATGGATGAGAACCACTCCCGCTTCGGCGTTCCCCCGCCG
TTCCAGGGCGAGCGCAAGGTGTCTGCTCCTCCCGCACCTCCCAGTCGGCC
AGGGCCTTCAGGGCCTCCTCCTCCTCCTCCACGCACTATGAGCCCTGTGC
CACCTCCACAGCTACCTCCCAAAGTTCCCAATGTTTCTGCAACAGGACCT
CCTCCACCACCACCCAGAAGCCCTGCTTCGCAGCCGCCACCACCCCCACC
TGTGCCTTCCAATTCCCGGCCTATTCCTCCCCCACCTACATCAAGCGTGT
CGCCTCCTTCGTCGGGTCTTCCGCCCCGGCCTCCTCTGCCAATTGGTATT
CCTCCACCTGGACCTCCGCCATCGCATCCTTCACCTAGTGCCGGACCTCC
TGCACCGCCTCCGCCCCCACCGCCGCCCACAACCTCGGTCCCGCCTCCTC
CACCCCCTCCGCCTCCGGCAAGCACTGGTCCTCCAGCACCCCCACCGCCT
CCGCCGGCACCAGGAAGTTCAATCCCACCACCACCACCTCCTCCACCGCC
AGGAGCTGGTGCTCCACCGCCGCCACCGCCGCCTCCTGGAGCTGGTGCGC
CTCCCCCGCCTCCTCCAGGTGGAGCTGCTCCGCCCTTGCCCAAAGCCGAA
GGTGGTAGGAATGACCTCATGGCTGCCATCCGGGCATCTGGAGGAAAGGG
CGGCGGTGGCCTGCGGAGGGTCAAGGATACAGAGAAGCGTGACCGGAGTG
CAGCCCTTGTACCTGGCTCAGCCAGCGAATCGTCTGCGCCGACCCCAAGT
GGTGGTGCTGCTCAAGGAGGCCTGGCAGGTGCTTTGCAAGATGCTCTGGC
GAAGAGAAAGCAGAAGGTCAGCGGTAGCGATGCCTTCAATCCTGAACGAC
AACGACAAGGAAACAGTCAGGAGAACTGTACCAAAGCCTGACAACAAAAT
CTTAGCGGTGGCTGTTGCGCGCCTCTACGTGGCCCACCCAGACACCCAGA
GATGGACGTACACTGGCCTGCAGGGAGCTGCAGTTTTAGCAAATGACCTG
GTCGGCCGTACCTTTTGGCTGAAATTGGTGGATGTATCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003286-T1.utr3p1 | KJC3_003286-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003286-T1.utr5p1 | KJC3_003286-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264U78 |
| DBxref | InterPro:IPR033927 |
| DBxref | InterPro:IPR011993 |
| DBxref | InterPro:IPR000697 |
| DBxref | PFAM:PF00568 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1533985..1536944 - |
|
