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KJC3_003301-T1, KJC3_003301-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003301-T1
Unique NameKJC3_003301-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1569524..1570422+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003301-T1 ID=KJC3_003301-T1|Name=KJC3_003301-T1|organism=Aspergillus niger KJC3|type=mRNA|length=899bp|location=Sequence derived from alignment at ch3:1569524..1570422+ (Aspergillus niger KJC3)
GTGACACAGAAAGGACACCTTCACTCATCAACCATCCAAAATGCGATTCC
TTTGTCTCCACGGCGCAGGTACCAACGCAGAAGTAAGCAAGCATCTCCCC
TGCTGGCGGGCTCTCTGGCTTATCTCCGCTTCCCCGCCATCCAAATCTAA
CCGTTGAACAAACATTAGATCTTCGAGATCCAATCCGGTAATTGAACAAC
AGTCCAATCCGCCAGGCCAAGATTGTCAATCTGACTTGTACCGCAACCAG
GTGGAATTACATACGACCTCGCAAAGTATGGCCATACGTTCAAATACTAC
AATGGCTGCATGGAAGCTGAAGTTGAGCCTCGTACATCACCCCCACCCTC
CACACCAGAAGATTCGGAGACATGTGATGGCTAACATATTGAATAGAGCT
AAAGGGCCTCTTTACTGGCCCTTTCTATAACCACTATCCGCGCGACCGGG
CACCGGGCGAATATCTCGCCCCCGCCATGAAGCACGTCTACGATATCATC
GAGCGTGATGGACCCTTTGACGCCGTTATGGGATTCTCGCAAGGTGCTGC
CCTGGCATGCGCCATGATCGCACATCATGCAAAGATGCATCAGGAGCCTC
TGTTCAAGGTCGCCGTATTTATCTGCGGTGCCGTACCGTTCGATAGCACT
GGCAACGAGATCATTCCTGAGCCTTCAGCTGGGGACGAGTATCCGGTCAA
TATCCCCACGGCAAACATTGTGGGAAAGCAGGATGAGCTATATCCGTCTA
GTATGCGTTTGTCCAGGCTGTGTGATCCGAGCAAGATGAGTTTCCATGAT
CACGGGTCGAAGCATATGGTGCCGTTTGATGTGAAGAACACCGAGGCCAT
GGTCGCTGTTATTGAGGCTGCGGTCCAGAAGGCTTTGAGGGGAGAATAG
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Coding sequence (CDS) from alignment at ch3:1569524..1570422+

>KJC3_003301-T1 ID=KJC3_003301-T1|Name=KJC3_003301-T1|organism=Aspergillus niger KJC3|type=CDS|length=2580bp|location=Sequence derived from alignment at ch3:1569524..1570422+ (Aspergillus niger KJC3)
ATGCGATTCCTTTGTCTCCACGGCGCAGGTACCAACGCAGAAATCTTCGA
GATCCAATCCGGTGGAATTACATACGACCTCGCAAAGTATGGCCATACGT
TCAAATACTACAATGGCTGCATGGAAGCTGAAGTTGAGCCTCAGCTAAAG
GGCCTCTTTACTGGCCCTTTCTATAACCACTATCCGCGCGACCGGGCACC
GGGCGAATATCTCGCCCCCGCCATGAAGCACGTCTACGATATCATCGAGC
GTGATGGACCCTTTGACGCCGTTATGGGATTCTCGCAAGGTGCTGCCCTG
GCATGCGCCATGATCGCACATCATGCAAAGATGCATCAGGAGCCTCTGTT
CAAGGTCGCCGTATTTATCTGCGGTGCCGTACCGTTCGATAGCACTGGCA
ACGAGATCATTCCTGAGCCTTCAGCTGGGGACGAGTATCCGGTCAATATC
CCCACGGCAAACATTGTGGGAAAGCAGGATGAGCTATATCCGTCTAGTAT
GCGTTTGTCCAGGCTGTGTGATCCGAGCAAGATGAGTTTCCATGATCACG
GGTCGAAGCATATGGTGCCGTTTGATGTGAAGAACACCGAGGCCATGGTC
GCTGTTATTGAGGCTGCGGTCCAGAAGGCTTTGAGGGGAGAATAGATGCG
ATTCCTTTGTCTCCACGGCGCAGGTACCAACGCAGAAATCTTCGAGATCC
AATCCGGTGGAATTACATACGACCTCGCAAAGTATGGCCATACGTTCAAA
TACTACAATGGCTGCATGGAAGCTGAAGTTGAGCCTCAGCTAAAGGGCCT
CTTTACTGGCCCTTTCTATAACCACTATCCGCGCGACCGGGCACCGGGCG
AATATCTCGCCCCCGCCATGAAGCACGTCTACGATATCATCGAGCGTGAT
GGACCCTTTGACGCCGTTATGGGATTCTCGCAAGGTGCTGCCCTGGCATG
CGCCATGATCGCACATCATGCAAAGATGCATCAGGAGCCTCTGTTCAAGG
TCGCCGTATTTATCTGCGGTGCCGTACCGTTCGATAGCACTGGCAACGAG
ATCATTCCTGAGCCTTCAGCTGGGGACGAGTATCCGGTCAATATCCCCAC
GGCAAACATTGTGGGAAAGCAGGATGAGCTATATCCGTCTAGTATGCGTT
TGTCCAGGCTGTGTGATCCGAGCAAGATGAGTTTCCATGATCACGGGTCG
AAGCATATGGTGCCGTTTGATGTGAAGAACACCGAGGCCATGGTCGCTGT
TATTGAGGCTGCGGTCCAGAAGGCTTTGAGGGGAGAATAGATGCGATTCC
TTTGTCTCCACGGCGCAGGTACCAACGCAGAAATCTTCGAGATCCAATCC
GGTGGAATTACATACGACCTCGCAAAGTATGGCCATACGTTCAAATACTA
CAATGGCTGCATGGAAGCTGAAGTTGAGCCTCAGCTAAAGGGCCTCTTTA
CTGGCCCTTTCTATAACCACTATCCGCGCGACCGGGCACCGGGCGAATAT
CTCGCCCCCGCCATGAAGCACGTCTACGATATCATCGAGCGTGATGGACC
CTTTGACGCCGTTATGGGATTCTCGCAAGGTGCTGCCCTGGCATGCGCCA
TGATCGCACATCATGCAAAGATGCATCAGGAGCCTCTGTTCAAGGTCGCC
GTATTTATCTGCGGTGCCGTACCGTTCGATAGCACTGGCAACGAGATCAT
TCCTGAGCCTTCAGCTGGGGACGAGTATCCGGTCAATATCCCCACGGCAA
ACATTGTGGGAAAGCAGGATGAGCTATATCCGTCTAGTATGCGTTTGTCC
AGGCTGTGTGATCCGAGCAAGATGAGTTTCCATGATCACGGGTCGAAGCA
TATGGTGCCGTTTGATGTGAAGAACACCGAGGCCATGGTCGCTGTTATTG
AGGCTGCGGTCCAGAAGGCTTTGAGGGGAGAATAGATGCGATTCCTTTGT
CTCCACGGCGCAGGTACCAACGCAGAAATCTTCGAGATCCAATCCGGTGG
AATTACATACGACCTCGCAAAGTATGGCCATACGTTCAAATACTACAATG
GCTGCATGGAAGCTGAAGTTGAGCCTCAGCTAAAGGGCCTCTTTACTGGC
CCTTTCTATAACCACTATCCGCGCGACCGGGCACCGGGCGAATATCTCGC
CCCCGCCATGAAGCACGTCTACGATATCATCGAGCGTGATGGACCCTTTG
ACGCCGTTATGGGATTCTCGCAAGGTGCTGCCCTGGCATGCGCCATGATC
GCACATCATGCAAAGATGCATCAGGAGCCTCTGTTCAAGGTCGCCGTATT
TATCTGCGGTGCCGTACCGTTCGATAGCACTGGCAACGAGATCATTCCTG
AGCCTTCAGCTGGGGACGAGTATCCGGTCAATATCCCCACGGCAAACATT
GTGGGAAAGCAGGATGAGCTATATCCGTCTAGTATGCGTTTGTCCAGGCT
GTGTGATCCGAGCAAGATGAGTTTCCATGATCACGGGTCGAAGCATATGG
TGCCGTTTGATGTGAAGAACACCGAGGCCATGGTCGCTGTTATTGAGGCT
GCGGTCCAGAAGGCTTTGAGGGGAGAATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003301KJC3_003301Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003301-T1KJC3_003301-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003301-T1.utr5p1KJC3_003301-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003301-T1.exon1KJC3_003301-T1.exon1Aspergillus niger KJC3exon
KJC3_003301-T1.exon2KJC3_003301-T1.exon2Aspergillus niger KJC3exon
KJC3_003301-T1.exon3KJC3_003301-T1.exon3Aspergillus niger KJC3exon
KJC3_003301-T1.exon4KJC3_003301-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003301-T1.cdsKJC3_003301-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR005645
DBxrefPFAM:PF03959
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1569524..1570422 +
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