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KJC3_003305-T1, KJC3_003305-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003305-T1
Unique NameKJC3_003305-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1577021..1578203-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003305-T1 ID=KJC3_003305-T1|Name=KJC3_003305-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1183bp|location=Sequence derived from alignment at ch3:1577021..1578203- (Aspergillus niger KJC3)
TTGATGTCTTCATTAACATTCCATTCCTCTTTTCCCTCTTCCTTTTTCCC
AACCCGTCATATAAAAGTATCTTGTACATAGGGCTGGTGCTTGAACTTCT
TTGCATATCTTGGTTTCCCACATTCCAGTTCACCTCTCCTACCCGAACCG
TCCATACCAAACACCATCCTAATCCTACTCTGCTCCACCCACACTACATC
ACGACTTACCAACAATGGACATGAGCTCTATGACCGGTATGGACATGGGG
ACCACCTCCACTACCATGTCCGGCATGTCAATGGCTACAACCACCGCTGC
CTCCGCATCGTCCACTATGGACATGTCTATGGGCTCCTCCACCTCCACCT
CTATGTCCATGCCCATGTCCACCTCTTCCTCCTCTTCTTCTTCTATGTCT
ATGTCAATGTCAATGGTCTTCATGAACGCCCACGACACCCCCCTCTTCTC
CAACCAATGGACCCCCTCGTCCAGCGGTACCTATGCCGGTACCTGCATCT
TCCTCATCGTCCTCGCCATCATCTCCCGCTGTCTGGCCGCCTTCAAAGCC
CTTATGGAACGCCGCTGGCTTGACGCCCACGTCAACCGTCGCTACATCGC
CGTCGCAGGGAAATCCACCGAAGCGGGTCGCATTGACTCGGATCCTGAAT
CCAAAGAAGCCAGTCTCATCACAGCCCAAGGTGTCGAGGAGAAAGTCAAG
GTCATCCGCAAAGCGGCGCGCGAACCACTCCCTTGGCGCTTCAGTACGGA
TCTTCCTCGCGCGCTGCTCTTTCTTGTCATCACGGGTGTCTCTTACCTAC
TGTATGTTCCCATACCCTCTACATCTAATAGATAGAAGAAAACCACATAC
TAATACAATTCAAACGCAGGATGTTGGCCGTCATGACCATGAACATCGGA
TACTTCTGCTCTGTCCTCGCCGGTGCCTTCCTGGGCGAGCTTGCCGTGGG
ACGCTTCATTCAGTGGAACGAGCATGAACATTAGTCCTACCCACATACAT
ATCCCATTTCGGGTTACTCGAACATAACGACTTCGATTCTAATGCACGGT
GTTTTCGGTTCGGGTGTTGGGTCTGGCGTTGCATTGCATTGCATTCATTT
CATATTACTGGGATAGCGAGCGTGTGACATGTGCACTGTTGGCTTTTTTT
GGGTTTTTGTCAGATACCACATTCCGCTTATTG
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Coding sequence (CDS) from alignment at ch3:1577021..1578203-

>KJC3_003305-T1 ID=KJC3_003305-T1|Name=KJC3_003305-T1|organism=Aspergillus niger KJC3|type=CDS|length=1404bp|location=Sequence derived from alignment at ch3:1577021..1578203- (Aspergillus niger KJC3)
GATGTTGGCCGTCATGACCATGAACATCGGATACTTCTGCTCTGTCCTCG
CCGGTGCCTTCCTGGGCGAGCTTGCCGTGGGACGCTTCATTCAGTGGAAC
GAGCATGAACATTAGATGGACATGAGCTCTATGACCGGTATGGACATGGG
GACCACCTCCACTACCATGTCCGGCATGTCAATGGCTACAACCACCGCTG
CCTCCGCATCGTCCACTATGGACATGTCTATGGGCTCCTCCACCTCCACC
TCTATGTCCATGCCCATGTCCACCTCTTCCTCCTCTTCTTCTTCTATGTC
TATGTCAATGTCAATGGTCTTCATGAACGCCCACGACACCCCCCTCTTCT
CCAACCAATGGACCCCCTCGTCCAGCGGTACCTATGCCGGTACCTGCATC
TTCCTCATCGTCCTCGCCATCATCTCCCGCTGTCTGGCCGCCTTCAAAGC
CCTTATGGAACGCCGCTGGCTTGACGCCCACGTCAACCGTCGCTACATCG
CCGTCGCAGGGAAATCCACCGAAGCGGGTCGCATTGACTCGGATCCTGAA
TCCAAAGAAGCCAGTCTCATCACAGCCCAAGGTGTCGAGGAGAAAGTCAA
GGTCATCCGCAAAGCGGCGCGCGAACCACTCCCTTGGCGCTTCAGTACGG
ATCTTCCTCGCGCGCTGCTCTTTCTTGTCATCACGGGTGTCTCTTACCTA
CTGATGTTGGCCGTCATGACCATGAACATCGGATACTTCTGCTCTGTCCT
CGCCGGTGCCTTCCTGGGCGAGCTTGCCGTGGGACGCTTCATTCAGTGGA
ACGAGCATGAACATTAGATGGACATGAGCTCTATGACCGGTATGGACATG
GGGACCACCTCCACTACCATGTCCGGCATGTCAATGGCTACAACCACCGC
TGCCTCCGCATCGTCCACTATGGACATGTCTATGGGCTCCTCCACCTCCA
CCTCTATGTCCATGCCCATGTCCACCTCTTCCTCCTCTTCTTCTTCTATG
TCTATGTCAATGTCAATGGTCTTCATGAACGCCCACGACACCCCCCTCTT
CTCCAACCAATGGACCCCCTCGTCCAGCGGTACCTATGCCGGTACCTGCA
TCTTCCTCATCGTCCTCGCCATCATCTCCCGCTGTCTGGCCGCCTTCAAA
GCCCTTATGGAACGCCGCTGGCTTGACGCCCACGTCAACCGTCGCTACAT
CGCCGTCGCAGGGAAATCCACCGAAGCGGGTCGCATTGACTCGGATCCTG
AATCCAAAGAAGCCAGTCTCATCACAGCCCAAGGTGTCGAGGAGAAAGTC
AAGGTCATCCGCAAAGCGGCGCGCGAACCACTCCCTTGGCGCTTCAGTAC
GGATCTTCCTCGCGCGCTGCTCTTTCTTGTCATCACGGGTGTCTCTTACC
TACT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005375copper ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0035434copper ion transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003305KJC3_003305Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003305-T1KJC3_003305-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003305-T1.cdsKJC3_003305-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003305-T1.utr3p1KJC3_003305-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003305-T1.exon2KJC3_003305-T1.exon2Aspergillus niger KJC3exon
KJC3_003305-T1.exon1KJC3_003305-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003305-T1.utr5p1KJC3_003305-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007274
DBxrefPFAM:PF04145
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1577021..1578203 -
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