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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1578429..1580871+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003306-T1 ID=KJC3_003306-T1|Name=KJC3_003306-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2443bp|location=Sequence derived from alignment at ch3:1578429..1580871+ (Aspergillus niger KJC3)
TTTCATTATTCATGATTCCCTCTCATTTTCTCTCAAATACACTCAAATCG
ACTATACCAGCATTGGCATCGGGTTTGATCTCGGGCCTTCAGTCTCTCGT
TTTCGCCTAATTGTCATTCGCTTCCTCCTCTTTCGTCCCCCGCGACATGT
ACATTGTGCCATGTCTTTCGACCATCATGCCTTGAACACCCAGATACTGC
TAATCCTTCATTTCTAGTATATACTGATCTCTTTTTTTCTTGATACCCTA
ATCCCGGAAGACAAATCTACATACCCGCAAGATGGACATGTCCATGTCTG
GCATGGGCCACATGTCCATGGGAAATGGCGTGCCTGGTCTGTTCTATTTG
CAGAAGATGTACTGGGCTGTTGTAGGGAGTGCCATCGCTGCTGGAACCGT
CATCAACGTCTTGAATCGCTTCCTCGCCTACCAAAGGTAAGTATATTAAC
GTTTATCGAAGTACGTTATGCTCATTCTCCCAGGTTTAAGGACTCGTCCT
TGACCCCCTCCAAGCCCAAGTCTATCTTCTTCAGCACATATGCCACCTTA
ACGGCCATCGTGCGTGAAGCAAGCTACGCGACTTTGCCCCCATTGTCATT
TCGCGGCCACTCCTATCACTTTGCGCCGTTGGGCCCTGTGGCCATCATCC
TGGCCAACCTCATCGTCGTGCTCGTCTTTTGTTTCTACAAGCTGGACACG
GCCGACCAATGGAAATGGGAAGATGTGGGCTACCGCACTGGGTTTATCGC
CATTTGCCAGCTGCCGTTGATCTTCCTCCTGGCGGGCAGGCAAAATCTCA
TCGGCATGCTCGTGGGCATGAGCTACGAGCGTCTCAATTGGTTTCATCGG
TGGATCGCGCGGACGCTGTGGTTGACCGCTACCATTCACATGTGCTTCTG
GTTTCGTGACTGGGGCCGCTACAACTACATCGTCTATGAGCTGAAGAACT
ACACCCTGGCGACGAGAGGCTTCGCCGCATGGATCATTCTGACCTTTATC
GTGATTACGTCCGCCGCCCCGATTCGACGGTTTGGGTACGAGTTCTTCGT
TCTGCAGCATCTGGTGACCTTTGTTGGCTTCACCGTAGCCGTGTGGCTCC
ACGCACCGGCAGAAGTCAAGGTGTGGGTGTGGATTCCGATCGGTTTTCTT
GTCTTCGACCGGGTGGCGCGCTACGTGTGGGCAACTTATGCGAACTTGTC
GATATTCCATCGTTCGAAGAGCCCGGCCCATGCCCTTTGGGCTAATCGGG
CGACTTTCACCCCGTTGCCAGGCAATGTAACTCGTATAGCGATTGAAAAT
CCCGGAGTCGGGTGGAAGCCGGGTCAGCATGTGTTTCTCACATGCCACTC
CATCGTGCCTCTGCAGAGCCATCCTTTTACCATTGGGTCTATTCCGGAAG
ACAACAAAATGGTGATGTACGTGCGCGCAGAAAAGGGCGGCACTCGACGC
TTCTTCCGTTATGCTTCGAAGAACCACCAGGTGCTTGGGACTAGTGACCA
GGTGCCCGCGAAGCGGGCGCGTACAGTCTTTATTGAGGGGCCGTATGGAC
AAATGCGACCTCTGAAGCAGTTTGACAGCGTGATTCTACTCGCTGGAGGC
ATGGGAGCGACATTCACTGTGCCGTGCCTGCGGGATATAGTCGCCAAGTG
GAAGGCTGAAAGCACACGGCGGCTCGCAGCAACCAAGCGGATTCGGTTCG
TCTGGGTGATCAAATCGCGCACGCAGCTGAGCTGGTTCGACCACCAATTG
CAGGAGGTGCTGAGGGATGTTGAAGAGGTTCGGCTCGCCAACCCGGACAT
CATCCGAGAGATCGAGATGAGCATATATATCACTTGTGACGAGAAGCTAG
AGCAACCGGCGCAAAACACGCTCTGCGCCCAGGAACAGTCACTATCACAG
CTGCAGACGACCCTACCCGCGAATGAGAAGTCTCTCGAAGCAGAGAAATC
AGCGACCGATGCTGTAGCCATTGAATCTGTAGAGCAGACCGGGTGTCAAC
CAGACGGAAACTGCTGCTGCACCGCTCCCATCAAAGATGAAGATGCCATC
GACGCTACGAATTGCACATGCTCGGGGCATGCCGCGCCGCAGTCGTCCAC
GACAAGCGAGCTCGCAACAGAATCGGACTCGAAGCCCGCGCAGAAACCAC
TACCCAATCTTACAGTCCTGTCTGGTCGACCGCACGCGCGCACGATCATC
CGCAAAGTCCTCGAGAAAGCTGAGGGCGAGAGCGCGGTAGTGGTGTGCGG
ACCCCGCGGACTGTCCGACGACGTGCGACGCAGCGTGGTGTGTCTGAGCG
ATGAGCGGGCAGTACACAAGGGGACAGGGGCGCAGGGGATATATTTGCAT
GTTGAGCAGTTTGGGTGGTGAGCTATAAGCATATGTATATAGATAATGAT
ACCCTTGACTTGACTTTCAATGATGACTCGATGAACTAAATGA back to topCoding sequence (CDS) from alignment at ch3:1578429..1580871+ >KJC3_003306-T1 ID=KJC3_003306-T1|Name=KJC3_003306-T1|organism=Aspergillus niger KJC3|type=CDS|length=4086bp|location=Sequence derived from alignment at ch3:1578429..1580871+ (Aspergillus niger KJC3)
ATGGACATGTCCATGTCTGGCATGGGCCACATGTCCATGGGAAATGGCGT
GCCTGGTCTGTTCTATTTGCAGAAGATGTACTGGGCTGTTGTAGGGAGTG
CCATCGCTGCTGGAACCGTCATCAACGTCTTGAATCGCTTCCTCGCCTAC
CAAAGGTTTAAGGACTCGTCCTTGACCCCCTCCAAGCCCAAGTCTATCTT
CTTCAGCACATATGCCACCTTAACGGCCATCGTGCGTGAAGCAAGCTACG
CGACTTTGCCCCCATTGTCATTTCGCGGCCACTCCTATCACTTTGCGCCG
TTGGGCCCTGTGGCCATCATCCTGGCCAACCTCATCGTCGTGCTCGTCTT
TTGTTTCTACAAGCTGGACACGGCCGACCAATGGAAATGGGAAGATGTGG
GCTACCGCACTGGGTTTATCGCCATTTGCCAGCTGCCGTTGATCTTCCTC
CTGGCGGGCAGGCAAAATCTCATCGGCATGCTCGTGGGCATGAGCTACGA
GCGTCTCAATTGGTTTCATCGGTGGATCGCGCGGACGCTGTGGTTGACCG
CTACCATTCACATGTGCTTCTGGTTTCGTGACTGGGGCCGCTACAACTAC
ATCGTCTATGAGCTGAAGAACTACACCCTGGCGACGAGAGGCTTCGCCGC
ATGGATCATTCTGACCTTTATCGTGATTACGTCCGCCGCCCCGATTCGAC
GGTTTGGGTACGAGTTCTTCGTTCTGCAGCATCTGGTGACCTTTGTTGGC
TTCACCGTAGCCGTGTGGCTCCACGCACCGGCAGAAGTCAAGGTGTGGGT
GTGGATTCCGATCGGTTTTCTTGTCTTCGACCGGGTGGCGCGCTACGTGT
GGGCAACTTATGCGAACTTGTCGATATTCCATCGTTCGAAGAGCCCGGCC
CATGCCCTTTGGGCTAATCGGGCGACTTTCACCCCGTTGCCAGGCAATGT
AACTCGTATAGCGATTGAAAATCCCGGAGTCGGGTGGAAGCCGGGTCAGC
ATGTGTTTCTCACATGCCACTCCATCGTGCCTCTGCAGAGCCATCCTTTT
ACCATTGGGTCTATTCCGGAAGACAACAAAATGGTGATGTACGTGCGCGC
AGAAAAGGGCGGCACTCGACGCTTCTTCCGTTATGCTTCGAAGAACCACC
AGGTGCTTGGGACTAGTGACCAGGTGCCCGCGAAGCGGGCGCGTACAGTC
TTTATTGAGGGGCCGTATGGACAAATGCGACCTCTGAAGCAGTTTGACAG
CGTGATTCTACTCGCTGGAGGCATGGGAGCGACATTCACTGTGCCGTGCC
TGCGGGATATAGTCGCCAAGTGGAAGGCTGAAAGCACACGGCGGCTCGCA
GCAACCAAGCGGATTCGGTTCGTCTGGGTGATCAAATCGCGCACGCAGCT
GAGCTGGTTCGACCACCAATTGCAGGAGGTGCTGAGGGATGTTGAAGAGG
TTCGGCTCGCCAACCCGGACATCATCCGAGAGATCGAGATGAGCATATAT
ATCACTTGTGACGAGAAGCTAGAGCAACCGGCGCAAAACACGCTCTGCGC
CCAGGAACAGTCACTATCACAGCTGCAGACGACCCTACCCGCGAATGAGA
AGTCTCTCGAAGCAGAGAAATCAGCGACCGATGCTGTAGCCATTGAATCT
GTAGAGCAGACCGGGTGTCAACCAGACGGAAACTGCTGCTGCACCGCTCC
CATCAAAGATGAAGATGCCATCGACGCTACGAATTGCACATGCTCGGGGC
ATGCCGCGCCGCAGTCGTCCACGACAAGCGAGCTCGCAACAGAATCGGAC
TCGAAGCCCGCGCAGAAACCACTACCCAATCTTACAGTCCTGTCTGGTCG
ACCGCACGCGCGCACGATCATCCGCAAAGTCCTCGAGAAAGCTGAGGGCG
AGAGCGCGGTAGTGGTGTGCGGACCCCGCGGACTGTCCGACGACGTGCGA
CGCAGCGTGGTGTGTCTGAGCGATGAGCGGGCAGTACACAAGGGGACAGG
GGCGCAGGGGATATATTTGCATGTTGAGCAGTTTGGGTGGTGAATGGACA
TGTCCATGTCTGGCATGGGCCACATGTCCATGGGAAATGGCGTGCCTGGT
CTGTTCTATTTGCAGAAGATGTACTGGGCTGTTGTAGGGAGTGCCATCGC
TGCTGGAACCGTCATCAACGTCTTGAATCGCTTCCTCGCCTACCAAAGGT
TTAAGGACTCGTCCTTGACCCCCTCCAAGCCCAAGTCTATCTTCTTCAGC
ACATATGCCACCTTAACGGCCATCGTGCGTGAAGCAAGCTACGCGACTTT
GCCCCCATTGTCATTTCGCGGCCACTCCTATCACTTTGCGCCGTTGGGCC
CTGTGGCCATCATCCTGGCCAACCTCATCGTCGTGCTCGTCTTTTGTTTC
TACAAGCTGGACACGGCCGACCAATGGAAATGGGAAGATGTGGGCTACCG
CACTGGGTTTATCGCCATTTGCCAGCTGCCGTTGATCTTCCTCCTGGCGG
GCAGGCAAAATCTCATCGGCATGCTCGTGGGCATGAGCTACGAGCGTCTC
AATTGGTTTCATCGGTGGATCGCGCGGACGCTGTGGTTGACCGCTACCAT
TCACATGTGCTTCTGGTTTCGTGACTGGGGCCGCTACAACTACATCGTCT
ATGAGCTGAAGAACTACACCCTGGCGACGAGAGGCTTCGCCGCATGGATC
ATTCTGACCTTTATCGTGATTACGTCCGCCGCCCCGATTCGACGGTTTGG
GTACGAGTTCTTCGTTCTGCAGCATCTGGTGACCTTTGTTGGCTTCACCG
TAGCCGTGTGGCTCCACGCACCGGCAGAAGTCAAGGTGTGGGTGTGGATT
CCGATCGGTTTTCTTGTCTTCGACCGGGTGGCGCGCTACGTGTGGGCAAC
TTATGCGAACTTGTCGATATTCCATCGTTCGAAGAGCCCGGCCCATGCCC
TTTGGGCTAATCGGGCGACTTTCACCCCGTTGCCAGGCAATGTAACTCGT
ATAGCGATTGAAAATCCCGGAGTCGGGTGGAAGCCGGGTCAGCATGTGTT
TCTCACATGCCACTCCATCGTGCCTCTGCAGAGCCATCCTTTTACCATTG
GGTCTATTCCGGAAGACAACAAAATGGTGATGTACGTGCGCGCAGAAAAG
GGCGGCACTCGACGCTTCTTCCGTTATGCTTCGAAGAACCACCAGGTGCT
TGGGACTAGTGACCAGGTGCCCGCGAAGCGGGCGCGTACAGTCTTTATTG
AGGGGCCGTATGGACAAATGCGACCTCTGAAGCAGTTTGACAGCGTGATT
CTACTCGCTGGAGGCATGGGAGCGACATTCACTGTGCCGTGCCTGCGGGA
TATAGTCGCCAAGTGGAAGGCTGAAAGCACACGGCGGCTCGCAGCAACCA
AGCGGATTCGGTTCGTCTGGGTGATCAAATCGCGCACGCAGCTGAGCTGG
TTCGACCACCAATTGCAGGAGGTGCTGAGGGATGTTGAAGAGGTTCGGCT
CGCCAACCCGGACATCATCCGAGAGATCGAGATGAGCATATATATCACTT
GTGACGAGAAGCTAGAGCAACCGGCGCAAAACACGCTCTGCGCCCAGGAA
CAGTCACTATCACAGCTGCAGACGACCCTACCCGCGAATGAGAAGTCTCT
CGAAGCAGAGAAATCAGCGACCGATGCTGTAGCCATTGAATCTGTAGAGC
AGACCGGGTGTCAACCAGACGGAAACTGCTGCTGCACCGCTCCCATCAAA
GATGAAGATGCCATCGACGCTACGAATTGCACATGCTCGGGGCATGCCGC
GCCGCAGTCGTCCACGACAAGCGAGCTCGCAACAGAATCGGACTCGAAGC
CCGCGCAGAAACCACTACCCAATCTTACAGTCCTGTCTGGTCGACCGCAC
GCGCGCACGATCATCCGCAAAGTCCTCGAGAAAGCTGAGGGCGAGAGCGC
GGTAGTGGTGTGCGGACCCCGCGGACTGTCCGACGACGTGCGACGCAGCG
TGGTGTGTCTGAGCGATGAGCGGGCAGTACACAAGGGGACAGGGGCGCAG
GGGATATATTTGCATGTTGAGCAGTTTGGGTGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003306-T1.utr5p1 | KJC3_003306-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003306-T1.utr3p1 | KJC3_003306-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017938 |
| DBxref | InterPro:IPR039261 |
| DBxref | InterPro:IPR017927 |
| DBxref | InterPro:IPR013112 |
| DBxref | InterPro:IPR013121 |
| DBxref | InterPro:IPR013130 |
| DBxref | PFAM:PF08030 |
| DBxref | PFAM:PF01794 |
| DBxref | PFAM:PF08022 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1578429..1580871 + |
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