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KJC3_003314-T1, KJC3_003314-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003314-T1
Unique NameKJC3_003314-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1604305..1605824+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003314-T1 ID=KJC3_003314-T1|Name=KJC3_003314-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1520bp|location=Sequence derived from alignment at ch3:1604305..1605824+ (Aspergillus niger KJC3)
CAGCTGGCTTAGCTTCAACCACTTCCGTCTGGTTCAACATCTCGCGCTAA
AATGGGGTCCAGACAGAGCAGAAAAAACCTTCCCCGCTTGATGCCCGACC
TGTTCAACTCCTTGACCTGCCTTGCTTGACAGGATGAATCGCCTTCCGGA
CGAGATTCTCCTCCTTATTGTTGACAACATCGTCTTGTTCAAACATAAAT
ACCAGTTTCTCCAGGTTTGTCGCCGTTGGCGGTCAGTCCTATTCAAGGCG
GTCTACGACTATGTCTGGATAGAGGGACATCAGATTCGCCCTCTTCTCTT
GGCCATCCAGCAGAACCCCGCGATAGGATCTTCCATCAAATATTTCAGGT
TGCACTGGTGGTCCTGCTATACATGGGATAAGGAGAATCACGATATCACT
TCTGTTCTACCGCTTGTGAATCGGATTAGCCAATCAGAGGAGGAAACGAA
AGAATGGGAGGAAGCTTTGATAGAGGGCAATCAGGATGCATGGCTTGGCC
TACTGCTCTTGCACATGGAGAACATGACAAGCTTGTTAATGCATTATACA
AGGCAACCCAAATTTCTCCGTCGAGTTATCTCACGCGCCGCAATACGTGA
GAAGCCATTTGACACGATGCCAATTCTACAGCAACTGGTCGATGTCGGGA
TTGACTCCTCGGACGACAATAAAGCATGGTTCCACAAGACTGAATTTCTC
CCCTTCTTCCATCTTCCGGCTCTGCGGTCCGTGAGCCTGGACTCCGTGGT
TGAGTCAATGGGTGTTCAAATTGACCACCCGGCTTTCAAGCCTGCCAAGG
GTACCTCTCCAGTTGTCGAACTCGAGTTTGGTGCACACCCTAATGGCAGT
AAGGGCATGGCGGACTTTATTACATCATGTGCGAACCTCGAGAAATTCAA
ATATCAACACTCAAATCAGGTGATATGGGGAGAACGATATATGAACTTCC
GTCCTCGGGCATTCTACTCTGCGCTTTGTACGCAAAAGCACAGCTTGCAG
GTCCTTCATTTGAACGACGGAGGGGAGACGCAGCAATCTCTTGACGACGA
CGACGATGATGATGATGATGACGCGAGCGTTCCCCCAACCGACTGGTTCG
GGTCATTGGCGGATTTCACTAAGCTATGGGATCTCCGGATTCCTGCCTCC
ACATTGTTGAATTTCCACTTGAGTGATGACAAACCAAAAGTATCGTCGCT
CAAAGAGATCTTGCCGTCTAGTTTGAAATGGCTTTGTCTGTCGCATTATG
AAGACTCCCTGAGGGATCAAGTCATATCCAATCTGCTGGAGGTGGTGGCT
TGTCGGAAAGAGAAGTTTCCGTATCTCGAGGAAGTGGAGATCCAGTCATA
TTGGCAGAATACTCGTGAGAGTTTATCTGCCAAGCAGGCTTTTACGCCAC
TGATTCAAGCTGGTGAAGATGTGGGGATCGATATCCTTGTATTTCCTTCA
TTCTACAGACAAAGGAGAGCGTAGACTATCACAACTATTTTCTTCCGCTA
CTATATTGAATAAACCTCAG
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Coding sequence (CDS) from alignment at ch3:1604305..1605824+

>KJC3_003314-T1 ID=KJC3_003314-T1|Name=KJC3_003314-T1|organism=Aspergillus niger KJC3|type=CDS|length=1341bp|location=Sequence derived from alignment at ch3:1604305..1605824+ (Aspergillus niger KJC3)
ATGAATCGCCTTCCGGACGAGATTCTCCTCCTTATTGTTGACAACATCGT
CTTGTTCAAACATAAATACCAGTTTCTCCAGGTTTGTCGCCGTTGGCGGT
CAGTCCTATTCAAGGCGGTCTACGACTATGTCTGGATAGAGGGACATCAG
ATTCGCCCTCTTCTCTTGGCCATCCAGCAGAACCCCGCGATAGGATCTTC
CATCAAATATTTCAGGTTGCACTGGTGGTCCTGCTATACATGGGATAAGG
AGAATCACGATATCACTTCTGTTCTACCGCTTGTGAATCGGATTAGCCAA
TCAGAGGAGGAAACGAAAGAATGGGAGGAAGCTTTGATAGAGGGCAATCA
GGATGCATGGCTTGGCCTACTGCTCTTGCACATGGAGAACATGACAAGCT
TGTTAATGCATTATACAAGGCAACCCAAATTTCTCCGTCGAGTTATCTCA
CGCGCCGCAATACGTGAGAAGCCATTTGACACGATGCCAATTCTACAGCA
ACTGGTCGATGTCGGGATTGACTCCTCGGACGACAATAAAGCATGGTTCC
ACAAGACTGAATTTCTCCCCTTCTTCCATCTTCCGGCTCTGCGGTCCGTG
AGCCTGGACTCCGTGGTTGAGTCAATGGGTGTTCAAATTGACCACCCGGC
TTTCAAGCCTGCCAAGGGTACCTCTCCAGTTGTCGAACTCGAGTTTGGTG
CACACCCTAATGGCAGTAAGGGCATGGCGGACTTTATTACATCATGTGCG
AACCTCGAGAAATTCAAATATCAACACTCAAATCAGGTGATATGGGGAGA
ACGATATATGAACTTCCGTCCTCGGGCATTCTACTCTGCGCTTTGTACGC
AAAAGCACAGCTTGCAGGTCCTTCATTTGAACGACGGAGGGGAGACGCAG
CAATCTCTTGACGACGACGACGATGATGATGATGATGACGCGAGCGTTCC
CCCAACCGACTGGTTCGGGTCATTGGCGGATTTCACTAAGCTATGGGATC
TCCGGATTCCTGCCTCCACATTGTTGAATTTCCACTTGAGTGATGACAAA
CCAAAAGTATCGTCGCTCAAAGAGATCTTGCCGTCTAGTTTGAAATGGCT
TTGTCTGTCGCATTATGAAGACTCCCTGAGGGATCAAGTCATATCCAATC
TGCTGGAGGTGGTGGCTTGTCGGAAAGAGAAGTTTCCGTATCTCGAGGAA
GTGGAGATCCAGTCATATTGGCAGAATACTCGTGAGAGTTTATCTGCCAA
GCAGGCTTTTACGCCACTGATTCAAGCTGGTGAAGATGTGGGGATCGATA
TCCTTGTATTTCCTTCATTCTACAGACAAAGGAGAGCGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003314KJC3_003314Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003314-T1.utr5p1KJC3_003314-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003314-T1.exon1KJC3_003314-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003314-T1.cdsKJC3_003314-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003314-T1.utr3p1KJC3_003314-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003314-T1KJC3_003314-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1604305..1605824 +
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