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KJC3_003315-T1, KJC3_003315-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003315-T1
Unique NameKJC3_003315-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1606781..1609256-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003315-T1 ID=KJC3_003315-T1|Name=KJC3_003315-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2476bp|location=Sequence derived from alignment at ch3:1606781..1609256- (Aspergillus niger KJC3)
GTATCATTAGTAGTGTGTACAGTAAAGTTGAGCGAAACCAGTAATCTCGG
TATGTTGGTTCTGTGGACGGACCCCTCGGGATCAAAATTACGCATGTGGT
AAGGTCTCGTCCTGACGGGCTCGCGTAACTTAACCGCCACCGTCTCGGTC
TTGTCTTGTCCCCGTTTTGTCTCGTCTTGTTCTTCCAGGCCGTCAAACAC
TCTCTTCCTTTTCACTCTCGCTCCCCCGAGTCCTCGCTGCCTCGTTCCTC
ATCTTTGCTCCCTCACGACGTCGACACCCCCATCTCCATCCCCTGCAGCG
CCCTTCTCATCTCTTTTCTAGTCGATTTTCTCCGGCCAATCCACCCACCA
TCGATTTCTTCAACCCCTTCGTCGTGAACATGGGTCGGACCGTCGACCAG
GAAGTTCACGCGGCGTTTGTCGAGTTCCGCGCCAAGGAAGACGATAAGGT
GCGTGACTCCTGTATTTCCCGTAATATTTCAACCCGCCGCCCAACACCAG
CGTCACTGACATGACGAACCTGGTTGTTTGCTTTCGCAGTGTCTTTCCGT
CCAGTGTATCTACTGCCAGCAGATTCGCGCAAAGAACACCTCGCGCCAGA
AGCAGCACCTGCTTGAGTGTCCCGGTCTCCGCGGCCACACCAATCCCCAG
GCCCAGTCCCAGTCCGCCCCCTCTGCCCCGAATGGCATCGCTGCTGCCAA
TGGATACCCTCCCACCCCGAATGGTGCTGCGGCCACCGCGCCGGGTGCTG
GCCCTGGGCCCGGTGCTCTCGCGACTCCCAACGGTCCCATGATGTCGAAC
GGTGTCAATACTCATGCTACTCCGATGCAGACGCCATTGCAGAACATGCA
GAGTCGCGCCTCGCTCCCGACATCAGGCCCAGCCGCAACCGCCTCCACGG
TCTCTGCCACCCAGCAGGCAGCTCGTGCCACTCCCAAAGCGAAGCCCAAG
AACTCGACCTCGAACCTTCCTGCCCCTCCCCTCGATGATGTTCATGCCGC
GTTCGTGGAGTTCCGTGCCAAAGAAGAAGACAAGGTGAGCGAGGATATGG
CCCACATGTTGCCTGATAGAAGAACCCTATGTCTGACAGGAGACCACCAC
CAGTGTCTTTCCGTTCAATGCATCTATTGCCAGCAGGTCCGCGCAAAGAA
CACCAGCCGTCAGCGTCAGCACCTACTGGAATGCCCCACCTACCTCAGTG
TTATGAAAGACTCCATCCCCGCAAACAACCTTCTTCATACTTTCCCCGAA
GGCGACGTGGCGCGTTCCCTGCAGATCCCCGCGCCTACCCTGGAACTGGA
CTTCCGCATGAGCATTAAGATGAACCCGAAGGTGTCTGTTGGTGAAAGTA
TTTGGGGTCAACGTGATTGGGTAACATTTGTCGGTGGTCAGTGGGCTGGT
CGGTGGGGTAAAGGTGTTGTTCTGGTAAGTCGTGACGCTTAATTGGGTTG
CTATCATCAGCAACATGCTCACTGTGCGTATAGCCTGGAGGACAAGACTC
GCAAATTGTGACCAAGGAATCATCTACACATCTCCGAGCGAGCTACATGC
TCCAGACCGCCGACGATCCCCCCGCATACATCGTCGTGAAGACCAACGGC
TGGTTGACCGGAGCCAAGGATATTCTGGACAAGGTCAATGACCCCGGTAT
GGCGGATAGCATCAACCCCAATACATACAAATATCGCATCAACTTGAACA
TGGAAACTGGAGACGAACGTTACGCGTTTTTGAACACTCTGATGTGGATC
GGAAGTGGCTGCCGCAGGGGCCACGAAGGTCAGTGCTCAACCTCGTCATC
CAACCCCGAACCATTCTTTACTAACACCTATGCAGTCATCTTTGATGCAT
TCCGCGTCAACTAATCTGCCACGATATTGCAGCTGTTTTGTCCGTTATTA
AGCGAGTAGCAATTGTTGATTTCATGGGGGAAAATCGTTGTCTTGGTTGT
TTTTCTTTCCTTTCCACCTTTTGATTGAGCTTCATCCTCTCTTCTGAAAG
TGTGGCTTGTGTATTTATCTCTTCGGTCCATCCGCGTGGGTTTACCCTTT
CCCTGGGGGATGCCTACCTACCTGCCATTACTTCCATTACCTTCACGGGT
CCGCTTGATGCGTTCATTCGAGGAGATTGTCTTCGAATGTCCTATTATGA
CTTGTCTTTGGGTTTCCTTTATCTTTTCTCTTCTTTTTTTTCACTTCCAT
CTTGAGCTGTCCACTTTGTAAGGTATCCGTTGTTTCCGTGTTTCCTTTTA
CTTTCTCTATTACATCTCCTAGGAGCAAGATTGTCATCATGAAGTTTCTT
CTACAACCCTGGTTTGTTTATTTCCCTTCTACTTGTCGAGTACATTCGAC
GGACCCCCTCATCACAACCATAATACGTTGAGCCAAAGCGTCGAGGATAC
ACCCTCGCATCTTGTACCTCTATCTTATTTTCCAGAATGGATATTGATTG
CTGCCTTTGATACAGAGTTAGGCTAG
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Coding sequence (CDS) from alignment at ch3:1606781..1609256-

>KJC3_003315-T1 ID=KJC3_003315-T1|Name=KJC3_003315-T1|organism=Aspergillus niger KJC3|type=CDS|length=6045bp|location=Sequence derived from alignment at ch3:1606781..1609256- (Aspergillus niger KJC3)
TCATCTTTGATGCATTCCGCGTCAACTAACCTGGAGGACAAGACTCGCAA
ATTGTGACCAAGGAATCATCTACACATCTCCGAGCGAGCTACATGCTCCA
GACCGCCGACGATCCCCCCGCATACATCGTCGTGAAGACCAACGGCTGGT
TGACCGGAGCCAAGGATATTCTGGACAAGGTCAATGACCCCGGTATGGCG
GATAGCATCAACCCCAATACATACAAATATCGCATCAACTTGAACATGGA
AACTGGAGACGAACGTTACGCGTTTTTGAACACTCTGATGTGGATCGGAA
GTGGCTGCCGCAGGGGCCACGAAGTGTCTTTCCGTTCAATGCATCTATTG
CCAGCAGGTCCGCGCAAAGAACACCAGCCGTCAGCGTCAGCACCTACTGG
AATGCCCCACCTACCTCAGTGTTATGAAAGACTCCATCCCCGCAAACAAC
CTTCTTCATACTTTCCCCGAAGGCGACGTGGCGCGTTCCCTGCAGATCCC
CGCGCCTACCCTGGAACTGGACTTCCGCATGAGCATTAAGATGAACCCGA
AGGTGTCTGTTGGTGAAAGTATTTGGGGTCAACGTGATTGGGTAACATTT
GTCGGTGGTCAGTGGGCTGGTCGGTGGGGTAAAGGTGTTGTTCTGTGTCT
TTCCGTCCAGTGTATCTACTGCCAGCAGATTCGCGCAAAGAACACCTCGC
GCCAGAAGCAGCACCTGCTTGAGTGTCCCGGTCTCCGCGGCCACACCAAT
CCCCAGGCCCAGTCCCAGTCCGCCCCCTCTGCCCCGAATGGCATCGCTGC
TGCCAATGGATACCCTCCCACCCCGAATGGTGCTGCGGCCACCGCGCCGG
GTGCTGGCCCTGGGCCCGGTGCTCTCGCGACTCCCAACGGTCCCATGATG
TCGAACGGTGTCAATACTCATGCTACTCCGATGCAGACGCCATTGCAGAA
CATGCAGAGTCGCGCCTCGCTCCCGACATCAGGCCCAGCCGCAACCGCCT
CCACGGTCTCTGCCACCCAGCAGGCAGCTCGTGCCACTCCCAAAGCGAAG
CCCAAGAACTCGACCTCGAACCTTCCTGCCCCTCCCCTCGATGATGTTCA
TGCCGCGTTCGTGGAGTTCCGTGCCAAAGAAGAAGACAAGATGGGTCGGA
CCGTCGACCAGGAAGTTCACGCGGCGTTTGTCGAGTTCCGCGCCAAGGAA
GACGATAAGTCATCTTTGATGCATTCCGCGTCAACTAACCTGGAGGACAA
GACTCGCAAATTGTGACCAAGGAATCATCTACACATCTCCGAGCGAGCTA
CATGCTCCAGACCGCCGACGATCCCCCCGCATACATCGTCGTGAAGACCA
ACGGCTGGTTGACCGGAGCCAAGGATATTCTGGACAAGGTCAATGACCCC
GGTATGGCGGATAGCATCAACCCCAATACATACAAATATCGCATCAACTT
GAACATGGAAACTGGAGACGAACGTTACGCGTTTTTGAACACTCTGATGT
GGATCGGAAGTGGCTGCCGCAGGGGCCACGAAGTGTCTTTCCGTTCAATG
CATCTATTGCCAGCAGGTCCGCGCAAAGAACACCAGCCGTCAGCGTCAGC
ACCTACTGGAATGCCCCACCTACCTCAGTGTTATGAAAGACTCCATCCCC
GCAAACAACCTTCTTCATACTTTCCCCGAAGGCGACGTGGCGCGTTCCCT
GCAGATCCCCGCGCCTACCCTGGAACTGGACTTCCGCATGAGCATTAAGA
TGAACCCGAAGGTGTCTGTTGGTGAAAGTATTTGGGGTCAACGTGATTGG
GTAACATTTGTCGGTGGTCAGTGGGCTGGTCGGTGGGGTAAAGGTGTTGT
TCTGTGTCTTTCCGTCCAGTGTATCTACTGCCAGCAGATTCGCGCAAAGA
ACACCTCGCGCCAGAAGCAGCACCTGCTTGAGTGTCCCGGTCTCCGCGGC
CACACCAATCCCCAGGCCCAGTCCCAGTCCGCCCCCTCTGCCCCGAATGG
CATCGCTGCTGCCAATGGATACCCTCCCACCCCGAATGGTGCTGCGGCCA
CCGCGCCGGGTGCTGGCCCTGGGCCCGGTGCTCTCGCGACTCCCAACGGT
CCCATGATGTCGAACGGTGTCAATACTCATGCTACTCCGATGCAGACGCC
ATTGCAGAACATGCAGAGTCGCGCCTCGCTCCCGACATCAGGCCCAGCCG
CAACCGCCTCCACGGTCTCTGCCACCCAGCAGGCAGCTCGTGCCACTCCC
AAAGCGAAGCCCAAGAACTCGACCTCGAACCTTCCTGCCCCTCCCCTCGA
TGATGTTCATGCCGCGTTCGTGGAGTTCCGTGCCAAAGAAGAAGACAAGA
TGGGTCGGACCGTCGACCAGGAAGTTCACGCGGCGTTTGTCGAGTTCCGC
GCCAAGGAAGACGATAAGTCATCTTTGATGCATTCCGCGTCAACTAACCT
GGAGGACAAGACTCGCAAATTGTGACCAAGGAATCATCTACACATCTCCG
AGCGAGCTACATGCTCCAGACCGCCGACGATCCCCCCGCATACATCGTCG
TGAAGACCAACGGCTGGTTGACCGGAGCCAAGGATATTCTGGACAAGGTC
AATGACCCCGGTATGGCGGATAGCATCAACCCCAATACATACAAATATCG
CATCAACTTGAACATGGAAACTGGAGACGAACGTTACGCGTTTTTGAACA
CTCTGATGTGGATCGGAAGTGGCTGCCGCAGGGGCCACGAAGTGTCTTTC
CGTTCAATGCATCTATTGCCAGCAGGTCCGCGCAAAGAACACCAGCCGTC
AGCGTCAGCACCTACTGGAATGCCCCACCTACCTCAGTGTTATGAAAGAC
TCCATCCCCGCAAACAACCTTCTTCATACTTTCCCCGAAGGCGACGTGGC
GCGTTCCCTGCAGATCCCCGCGCCTACCCTGGAACTGGACTTCCGCATGA
GCATTAAGATGAACCCGAAGGTGTCTGTTGGTGAAAGTATTTGGGGTCAA
CGTGATTGGGTAACATTTGTCGGTGGTCAGTGGGCTGGTCGGTGGGGTAA
AGGTGTTGTTCTGTGTCTTTCCGTCCAGTGTATCTACTGCCAGCAGATTC
GCGCAAAGAACACCTCGCGCCAGAAGCAGCACCTGCTTGAGTGTCCCGGT
CTCCGCGGCCACACCAATCCCCAGGCCCAGTCCCAGTCCGCCCCCTCTGC
CCCGAATGGCATCGCTGCTGCCAATGGATACCCTCCCACCCCGAATGGTG
CTGCGGCCACCGCGCCGGGTGCTGGCCCTGGGCCCGGTGCTCTCGCGACT
CCCAACGGTCCCATGATGTCGAACGGTGTCAATACTCATGCTACTCCGAT
GCAGACGCCATTGCAGAACATGCAGAGTCGCGCCTCGCTCCCGACATCAG
GCCCAGCCGCAACCGCCTCCACGGTCTCTGCCACCCAGCAGGCAGCTCGT
GCCACTCCCAAAGCGAAGCCCAAGAACTCGACCTCGAACCTTCCTGCCCC
TCCCCTCGATGATGTTCATGCCGCGTTCGTGGAGTTCCGTGCCAAAGAAG
AAGACAAGATGGGTCGGACCGTCGACCAGGAAGTTCACGCGGCGTTTGTC
GAGTTCCGCGCCAAGGAAGACGATAAGTCATCTTTGATGCATTCCGCGTC
AACTAACCTGGAGGACAAGACTCGCAAATTGTGACCAAGGAATCATCTAC
ACATCTCCGAGCGAGCTACATGCTCCAGACCGCCGACGATCCCCCCGCAT
ACATCGTCGTGAAGACCAACGGCTGGTTGACCGGAGCCAAGGATATTCTG
GACAAGGTCAATGACCCCGGTATGGCGGATAGCATCAACCCCAATACATA
CAAATATCGCATCAACTTGAACATGGAAACTGGAGACGAACGTTACGCGT
TTTTGAACACTCTGATGTGGATCGGAAGTGGCTGCCGCAGGGGCCACGAA
GTGTCTTTCCGTTCAATGCATCTATTGCCAGCAGGTCCGCGCAAAGAACA
CCAGCCGTCAGCGTCAGCACCTACTGGAATGCCCCACCTACCTCAGTGTT
ATGAAAGACTCCATCCCCGCAAACAACCTTCTTCATACTTTCCCCGAAGG
CGACGTGGCGCGTTCCCTGCAGATCCCCGCGCCTACCCTGGAACTGGACT
TCCGCATGAGCATTAAGATGAACCCGAAGGTGTCTGTTGGTGAAAGTATT
TGGGGTCAACGTGATTGGGTAACATTTGTCGGTGGTCAGTGGGCTGGTCG
GTGGGGTAAAGGTGTTGTTCTGTGTCTTTCCGTCCAGTGTATCTACTGCC
AGCAGATTCGCGCAAAGAACACCTCGCGCCAGAAGCAGCACCTGCTTGAG
TGTCCCGGTCTCCGCGGCCACACCAATCCCCAGGCCCAGTCCCAGTCCGC
CCCCTCTGCCCCGAATGGCATCGCTGCTGCCAATGGATACCCTCCCACCC
CGAATGGTGCTGCGGCCACCGCGCCGGGTGCTGGCCCTGGGCCCGGTGCT
CTCGCGACTCCCAACGGTCCCATGATGTCGAACGGTGTCAATACTCATGC
TACTCCGATGCAGACGCCATTGCAGAACATGCAGAGTCGCGCCTCGCTCC
CGACATCAGGCCCAGCCGCAACCGCCTCCACGGTCTCTGCCACCCAGCAG
GCAGCTCGTGCCACTCCCAAAGCGAAGCCCAAGAACTCGACCTCGAACCT
TCCTGCCCCTCCCCTCGATGATGTTCATGCCGCGTTCGTGGAGTTCCGTG
CCAAAGAAGAAGACAAGATGGGTCGGACCGTCGACCAGGAAGTTCACGCG
GCGTTTGTCGAGTTCCGCGCCAAGGAAGACGATAAGTCATCTTTGATGCA
TTCCGCGTCAACTAACCTGGAGGACAAGACTCGCAAATTGTGACCAAGGA
ATCATCTACACATCTCCGAGCGAGCTACATGCTCCAGACCGCCGACGATC
CCCCCGCATACATCGTCGTGAAGACCAACGGCTGGTTGACCGGAGCCAAG
GATATTCTGGACAAGGTCAATGACCCCGGTATGGCGGATAGCATCAACCC
CAATACATACAAATATCGCATCAACTTGAACATGGAAACTGGAGACGAAC
GTTACGCGTTTTTGAACACTCTGATGTGGATCGGAAGTGGCTGCCGCAGG
GGCCACGAAGTGTCTTTCCGTTCAATGCATCTATTGCCAGCAGGTCCGCG
CAAAGAACACCAGCCGTCAGCGTCAGCACCTACTGGAATGCCCCACCTAC
CTCAGTGTTATGAAAGACTCCATCCCCGCAAACAACCTTCTTCATACTTT
CCCCGAAGGCGACGTGGCGCGTTCCCTGCAGATCCCCGCGCCTACCCTGG
AACTGGACTTCCGCATGAGCATTAAGATGAACCCGAAGGTGTCTGTTGGT
GAAAGTATTTGGGGTCAACGTGATTGGGTAACATTTGTCGGTGGTCAGTG
GGCTGGTCGGTGGGGTAAAGGTGTTGTTCTGTGTCTTTCCGTCCAGTGTA
TCTACTGCCAGCAGATTCGCGCAAAGAACACCTCGCGCCAGAAGCAGCAC
CTGCTTGAGTGTCCCGGTCTCCGCGGCCACACCAATCCCCAGGCCCAGTC
CCAGTCCGCCCCCTCTGCCCCGAATGGCATCGCTGCTGCCAATGGATACC
CTCCCACCCCGAATGGTGCTGCGGCCACCGCGCCGGGTGCTGGCCCTGGG
CCCGGTGCTCTCGCGACTCCCAACGGTCCCATGATGTCGAACGGTGTCAA
TACTCATGCTACTCCGATGCAGACGCCATTGCAGAACATGCAGAGTCGCG
CCTCGCTCCCGACATCAGGCCCAGCCGCAACCGCCTCCACGGTCTCTGCC
ACCCAGCAGGCAGCTCGTGCCACTCCCAAAGCGAAGCCCAAGAACTCGAC
CTCGAACCTTCCTGCCCCTCCCCTCGATGATGTTCATGCCGCGTTCGTGG
AGTTCCGTGCCAAAGAAGAAGACAAGATGGGTCGGACCGTCGACCAGGAA
GTTCACGCGGCGTTTGTCGAGTTCCGCGCCAAGGAAGACGATAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003315KJC3_003315Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003315-T1KJC3_003315-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003315-T1.cdsKJC3_003315-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003315-T1.utr3p1KJC3_003315-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003315-T1.exon5KJC3_003315-T1.exon5Aspergillus niger KJC3exon
KJC3_003315-T1.exon4KJC3_003315-T1.exon4Aspergillus niger KJC3exon
KJC3_003315-T1.exon3KJC3_003315-T1.exon3Aspergillus niger KJC3exon
KJC3_003315-T1.exon2KJC3_003315-T1.exon2Aspergillus niger KJC3exon
KJC3_003315-T1.exon1KJC3_003315-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003315-T1.utr5p1KJC3_003315-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefPFAM:PF11578
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1606781..1609256 -
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