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KJC3_003328-T1, KJC3_003328-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003328-T1
Unique NameKJC3_003328-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1641890..1642736+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003328-T1 ID=KJC3_003328-T1|Name=KJC3_003328-T1|organism=Aspergillus niger KJC3|type=mRNA|length=847bp|location=Sequence derived from alignment at ch3:1641890..1642736+ (Aspergillus niger KJC3)
ATGGCTGAAGGCTTCGTTGACGCCTCGCGCGTCGAGGCCCCAGTCACCCT
CAAGACCTACTTGATGTGTGCCTTTGCGGCTTTTGGTGGTATCTTCTTCG
GTTATGACTCTGGTTATATCAGCGGTGTCATGGGAATGAGATACTTCATC
GAGGAGTTTGAGGGCTTGGTACGTAGCGTCGTTGCATCAAACTATTATGA
AGCGGGAGGGACTGACTTCGATGTAGGACTATAACACTACCCCCACCGAT
TCCTTCGTCCTCCCGTCCTGGAAAAAATCGTTGATCACGTCGATCCTCTC
GGCTGGAACCTTCTTTGGTGCCCTCATTGCTGGTGACTTGGCAGACTGGT
TCGGTCGTCGCACTACCATTGTCAGTGGTTGTGTTGTCTTCATCGTTGGT
GTTATCCTGCAGACCGCTTCGACCTCCTTGGGTCTGCTTGTTGCCGGCCG
TCTGGTCGCGGGATTTGGTGTGGGCTTCGTCTCCGCCATCATTATCCTGT
ACATGTCTGAGATTGCACCTCGCAAGGTTCGCGGTGCTATTGTCTCAGGG
TACCAGTTCTGCATCACCATCGGGCTCATGTTGGCCTCGTGCGTCGACTA
CGGCACTGAGAACCGTCTCGACTCTGGCTCCTACCGTATCCCAATCGGCC
TCCAGCTCGCCTGGGCCTTGATCCTGGGAGGTGGTCTGCTCTGCCTGCCC
GAGTCCCCTCGTTACTTTGTTAAAAAGGGCGACCTGGCTAAGGCTGCGGA
GGTTCTTGCCCGCGTTCGTGGTCAACCCCAAGACTCGATTATATCAAGGA
TGAGCTGGCGGAGATTGTGGCAAATCATGAGTACGAGATGCAGGTGA
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Coding sequence (CDS) from alignment at ch3:1641890..1642736+

>KJC3_003328-T1 ID=KJC3_003328-T1|Name=KJC3_003328-T1|organism=Aspergillus niger KJC3|type=CDS|length=1578bp|location=Sequence derived from alignment at ch3:1641890..1642736+ (Aspergillus niger KJC3)
ATGGCTGAAGGCTTCGTTGACGCCTCGCGCGTCGAGGCCCCAGTCACCCT
CAAGACCTACTTGATGTGTGCCTTTGCGGCTTTTGGTGGTATCTTCTTCG
GTTATGACTCTGGTTATATCAGCGGTGTCATGGGAATGAGATACTTCATC
GAGGAGTTTGAGGGCTTGGACTATAACACTACCCCCACCGATTCCTTCGT
CCTCCCGTCCTGGAAAAAATCGTTGATCACGTCGATCCTCTCGGCTGGAA
CCTTCTTTGGTGCCCTCATTGCTGGTGACTTGGCAGACTGGTTCGGTCGT
CGCACTACCATTGTCAGTGGTTGTGTTGTCTTCATCGTTGGTGTTATCCT
GCAGACCGCTTCGACCTCCTTGGGTCTGCTTGTTGCCGGCCGTCTGGTCG
CGGGATTTGGTGTGGGCTTCGTCTCCGCCATCATTATCCTGTACATGTCT
GAGATTGCACCTCGCAAGGTTCGCGGTGCTATTGTCTCAGGGTACCAGTT
CTGCATCACCATCGGGCTCATGTTGGCCTCGTGCGTCGACTACGGCACTG
AGAACCGTCTCGACTCTGGCTCCTACCGTATCCCAATCGGCCTCCAGCTC
GCCTGGGCCTTGATCCTGGGAGGTGGTCTGCTCTGCCTGCCCGAGTCCCC
TCGTTACTTTGTTAAAAAGGGCGACCTGGCTAAGGCTGCGGAGGTTCTTG
CCCGCGTTCGTGGTCAACCCCAAGACTCGATTATATCAAGGATGAGCTGG
CGGAGATTGTGGCAAATCATGAGTACGAGATGCAGGTGAATGGCTGAAGG
CTTCGTTGACGCCTCGCGCGTCGAGGCCCCAGTCACCCTCAAGACCTACT
TGATGTGTGCCTTTGCGGCTTTTGGTGGTATCTTCTTCGGTTATGACTCT
GGTTATATCAGCGGTGTCATGGGAATGAGATACTTCATCGAGGAGTTTGA
GGGCTTGGACTATAACACTACCCCCACCGATTCCTTCGTCCTCCCGTCCT
GGAAAAAATCGTTGATCACGTCGATCCTCTCGGCTGGAACCTTCTTTGGT
GCCCTCATTGCTGGTGACTTGGCAGACTGGTTCGGTCGTCGCACTACCAT
TGTCAGTGGTTGTGTTGTCTTCATCGTTGGTGTTATCCTGCAGACCGCTT
CGACCTCCTTGGGTCTGCTTGTTGCCGGCCGTCTGGTCGCGGGATTTGGT
GTGGGCTTCGTCTCCGCCATCATTATCCTGTACATGTCTGAGATTGCACC
TCGCAAGGTTCGCGGTGCTATTGTCTCAGGGTACCAGTTCTGCATCACCA
TCGGGCTCATGTTGGCCTCGTGCGTCGACTACGGCACTGAGAACCGTCTC
GACTCTGGCTCCTACCGTATCCCAATCGGCCTCCAGCTCGCCTGGGCCTT
GATCCTGGGAGGTGGTCTGCTCTGCCTGCCCGAGTCCCCTCGTTACTTTG
TTAAAAAGGGCGACCTGGCTAAGGCTGCGGAGGTTCTTGCCCGCGTTCGT
GGTCAACCCCAAGACTCGATTATATCAAGGATGAGCTGGCGGAGATTGTG
GCAAATCATGAGTACGAGATGCAGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003328KJC3_003328Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003328-T1.exon1KJC3_003328-T1.exon1Aspergillus niger KJC3exon
KJC3_003328-T1.exon2KJC3_003328-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003328-T1.cdsKJC3_003328-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003328-T1KJC3_003328-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1641890..1642736 +
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