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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1650329..1652564- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003334-T1 ID=KJC3_003334-T1|Name=KJC3_003334-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2236bp|location=Sequence derived from alignment at ch3:1650329..1652564- (Aspergillus niger KJC3)
ACAGTTTTGGCTTGGCTGGGAGCTTTGATTATAGCTTCCTTCTCTGCCTG
AGGTTACTTTCTGTGGTTATGTCCAAAGAACATTCACTTTCGGATACCGG
GTCCACTAGGTCGAGGTCTACGTCGCTGTCTAGCTCAGATGATGGGTCCT
TGTCGGGCCGGCCTTACAGACTGGGGACATTGAGGACGCGAACGAGATCA
GGGTCCAGACACAGTACAGCACAGGTGGAACGAGTGCATTCCGGAAGGCA
TCTCGATGATCATTCTGTCTACCACAGCGATAATGAGCTGGATCTGGACT
CACCGTCCGATGACAGAGGGGAAAAGGACGAACCTGTCCTTGAAGTACGC
GGGGGTGTGGTGAACGAGCGTGACCGTGATCTGGAAGCTGGAGCCCAGGC
TGCAGCAGGCTTGGAAAAGTCACGGACTGCACGGTCGGACAAATCCAGAG
CAGATCCTAAACTGGTATGTCTGGTTTCTTTGTTGTTACATCTAGCGCTA
ACAGGATAGGTTACTTGGGATGGCCCCGATGATCCGGAGAACCCCAAAAA
TTGGCCAATGAAGAAGAAGTGGGCGGCGGTGGTGACAGTATCCTGCTTCA
CGTTCATCTCGCCCGTGTCCTCTTCCATGGTGGCACCAGCCCTTAGTTCG
ATATCTAAAGACTTCAACATCACGGACGAGGTCATCTCACAGCTCACCCT
GTCCGTGTTTATCCTGGCTTACGCTGTCGGGCCGCTCTTTCTCGGGCCGC
TCTCCGAGATCTACGGTCGAGTGATTGTCCTACAGTTAGCCAATCTACTA
TATCTTGTCTTCAACATCGGCTGCGGCGTATCACAGACCAAAGTACAAAT
GATCGTCTGTCGATTCTTCGCCGGATTAGGCGGTAGCGCTCCACTAGCAG
TAAGCAACCCCTCTTACACTCCAAGACCCCCATCTAACAACCCAGATCGG
TGGTGGCGTCCTCTCGGACTGCTTCAAGCCCGAACAGCGCGGCAAAAGCG
TCGCTATCTACAGTCTGGCACCTCTCCTCGGCCCAGCCGTCGGACCCATC
GCAGGCGGCTTCATCGCCGAAAACACAACCTGGCGATGGGTATTCTACGC
GACCTCCATCGCCGACGGATTGATCCAAGTAGCCGGCCTCTTCTTCCTCC
AAGAAACCTACGCCCCAATCATCCTCAAAAAGCGCGCCCAGAAACTCCGC
AAAGAAACCAACGATACCAACTACCAAACCGAATTCGAGCGCCAAAACAA
AACCTTCGGGCAGGTTATGCGCGCCGCACTCATTCGCCCCTTCCGCCTCC
TCTCCACCCAACCCATCGTCCAAGCCCTCGCCGCCTACATGGCCTACATC
TACGGCACAATGTACCTCGTGCTCTCGACCTTCCCCTCCCTCTGGACCAG
CCCGGAATACTACAACGAATCCACCGGCATCGGCGGCCTGAACTACATCT
CCCTCGGTCTGGGCTTCTGGCTCGGCTCTCAGATCTGCGCCCCGCTAAAC
GATCGTATCTACCGTCGTCTGAAAGGTAAAAACAACGGCATGGGGAAGCC
CGAGTTCCGCGTCCCGCTGCTGTTCGTCGGCGCATTTCTCATCCCCTCGG
GCCTGTTCATCTACGGCTGGACAGCCCAGACACACTGCCACTGGATCGCT
CCGAACATCGGTGCCTGCATGTACGGAATGGGCAATATCATCTCCTTCCA
ATGTCTGCAGACGTATATCGTCGACTCGTACACGCGGTTCGCCGCCAGCG
CATTAGCAGCAGTGGCGTGTATGCGCTCGCTCGCGGGTTTCGGGTTCCCG
TTATTCGCACCGTATATGTATCAAGCGCTGGACTATGGGTGGGGGAATAG
CTTGTTGGCCTTTATTGCAATAGCGCTGGGGGTGCCGGCGCCGGTGTTTT
TGTGGAAGTTTGGGGAGAAGTTACGGAAGATGAGTACATATGCGGCTGGT
TGATACCTTAGTTGATTTAATATCAATACTACATATTCTGTAGACATAAA
ATCTGACTTTACTTTTCTCTAATCTCTTGAATACATATGCATATCATCCA
AAAATCACCCTCGTCGTATAAGGGAATGTGGGGGTTGGAGGGGAATTAAA
AAACGACAAGGACGTGATTCGAACACGCGCACCCGAAGGTATAAGATGTC
GTCTGTTACAGAACAATCACCGTGTCTCAGGTAATCGTCCAATCCAGATT
CAAGTCTTACGTCTTAAACCACTCGACCACCTTGCC back to topCoding sequence (CDS) from alignment at ch3:1650329..1652564- >KJC3_003334-T1 ID=KJC3_003334-T1|Name=KJC3_003334-T1|organism=Aspergillus niger KJC3|type=CDS|length=5382bp|location=Sequence derived from alignment at ch3:1650329..1652564- (Aspergillus niger KJC3)
ATCGGTGGTGGCGTCCTCTCGGACTGCTTCAAGCCCGAACAGCGCGGCAA
AAGCGTCGCTATCTACAGTCTGGCACCTCTCCTCGGCCCAGCCGTCGGAC
CCATCGCAGGCGGCTTCATCGCCGAAAACACAACCTGGCGATGGGTATTC
TACGCGACCTCCATCGCCGACGGATTGATCCAAGTAGCCGGCCTCTTCTT
CCTCCAAGAAACCTACGCCCCAATCATCCTCAAAAAGCGCGCCCAGAAAC
TCCGCAAAGAAACCAACGATACCAACTACCAAACCGAATTCGAGCGCCAA
AACAAAACCTTCGGGCAGGTTATGCGCGCCGCACTCATTCGCCCCTTCCG
CCTCCTCTCCACCCAACCCATCGTCCAAGCCCTCGCCGCCTACATGGCCT
ACATCTACGGCACAATGTACCTCGTGCTCTCGACCTTCCCCTCCCTCTGG
ACCAGCCCGGAATACTACAACGAATCCACCGGCATCGGCGGCCTGAACTA
CATCTCCCTCGGTCTGGGCTTCTGGCTCGGCTCTCAGATCTGCGCCCCGC
TAAACGATCGTATCTACCGTCGTCTGAAAGGTAAAAACAACGGCATGGGG
AAGCCCGAGTTCCGCGTCCCGCTGCTGTTCGTCGGCGCATTTCTCATCCC
CTCGGGCCTGTTCATCTACGGCTGGACAGCCCAGACACACTGCCACTGGA
TCGCTCCGAACATCGGTGCCTGCATGTACGGAATGGGCAATATCATCTCC
TTCCAATGTCTGCAGACGTATATCGTCGACTCGTACACGCGGTTCGCCGC
CAGCGCATTAGCAGCAGTGGCGTGTATGCGCTCGCTCGCGGGTTTCGGGT
TCCCGTTATTCGCACCGTATATGTATCAAGCGCTGGACTATGGGTGGGGG
AATAGCTTGTTGGCCTTTATTGCAATAGCGCTGGGGGTGCCGGCGCCGGT
GTTTTTGTGGAAGTTTGGGGAGAAGTTACGGAAGATGAGTACATATGCGG
CTGGTTGAGTTACTTGGGATGGCCCCGATGATCCGGAGAACCCCAAAAAT
TGGCCAATGAAGAAGAAGTGGGCGGCGGTGGTGACAGTATCCTGCTTCAC
GTTCATCTCGCCCGTGTCCTCTTCCATGGTGGCACCAGCCCTTAGTTCGA
TATCTAAAGACTTCAACATCACGGACGAGGTCATCTCACAGCTCACCCTG
TCCGTGTTTATCCTGGCTTACGCTGTCGGGCCGCTCTTTCTCGGGCCGCT
CTCCGAGATCTACGGTCGAGTGATTGTCCTACAGTTAGCCAATCTACTAT
ATCTTGTCTTCAACATCGGCTGCGGCGTATCACAGACCAAAGTACAAATG
ATCGTCTGTCGATTCTTCGCCGGATTAGGCGGTAGCGCTCCACTAGCAAT
GTCCAAAGAACATTCACTTTCGGATACCGGGTCCACTAGGTCGAGGTCTA
CGTCGCTGTCTAGCTCAGATGATGGGTCCTTGTCGGGCCGGCCTTACAGA
CTGGGGACATTGAGGACGCGAACGAGATCAGGGTCCAGACACAGTACAGC
ACAGGTGGAACGAGTGCATTCCGGAAGGCATCTCGATGATCATTCTGTCT
ACCACAGCGATAATGAGCTGGATCTGGACTCACCGTCCGATGACAGAGGG
GAAAAGGACGAACCTGTCCTTGAAGTACGCGGGGGTGTGGTGAACGAGCG
TGACCGTGATCTGGAAGCTGGAGCCCAGGCTGCAGCAGGCTTGGAAAAGT
CACGGACTGCACGGTCGGACAAATCCAGAGCAGATCCTAAACTGATCGGT
GGTGGCGTCCTCTCGGACTGCTTCAAGCCCGAACAGCGCGGCAAAAGCGT
CGCTATCTACAGTCTGGCACCTCTCCTCGGCCCAGCCGTCGGACCCATCG
CAGGCGGCTTCATCGCCGAAAACACAACCTGGCGATGGGTATTCTACGCG
ACCTCCATCGCCGACGGATTGATCCAAGTAGCCGGCCTCTTCTTCCTCCA
AGAAACCTACGCCCCAATCATCCTCAAAAAGCGCGCCCAGAAACTCCGCA
AAGAAACCAACGATACCAACTACCAAACCGAATTCGAGCGCCAAAACAAA
ACCTTCGGGCAGGTTATGCGCGCCGCACTCATTCGCCCCTTCCGCCTCCT
CTCCACCCAACCCATCGTCCAAGCCCTCGCCGCCTACATGGCCTACATCT
ACGGCACAATGTACCTCGTGCTCTCGACCTTCCCCTCCCTCTGGACCAGC
CCGGAATACTACAACGAATCCACCGGCATCGGCGGCCTGAACTACATCTC
CCTCGGTCTGGGCTTCTGGCTCGGCTCTCAGATCTGCGCCCCGCTAAACG
ATCGTATCTACCGTCGTCTGAAAGGTAAAAACAACGGCATGGGGAAGCCC
GAGTTCCGCGTCCCGCTGCTGTTCGTCGGCGCATTTCTCATCCCCTCGGG
CCTGTTCATCTACGGCTGGACAGCCCAGACACACTGCCACTGGATCGCTC
CGAACATCGGTGCCTGCATGTACGGAATGGGCAATATCATCTCCTTCCAA
TGTCTGCAGACGTATATCGTCGACTCGTACACGCGGTTCGCCGCCAGCGC
ATTAGCAGCAGTGGCGTGTATGCGCTCGCTCGCGGGTTTCGGGTTCCCGT
TATTCGCACCGTATATGTATCAAGCGCTGGACTATGGGTGGGGGAATAGC
TTGTTGGCCTTTATTGCAATAGCGCTGGGGGTGCCGGCGCCGGTGTTTTT
GTGGAAGTTTGGGGAGAAGTTACGGAAGATGAGTACATATGCGGCTGGTT
GAGTTACTTGGGATGGCCCCGATGATCCGGAGAACCCCAAAAATTGGCCA
ATGAAGAAGAAGTGGGCGGCGGTGGTGACAGTATCCTGCTTCACGTTCAT
CTCGCCCGTGTCCTCTTCCATGGTGGCACCAGCCCTTAGTTCGATATCTA
AAGACTTCAACATCACGGACGAGGTCATCTCACAGCTCACCCTGTCCGTG
TTTATCCTGGCTTACGCTGTCGGGCCGCTCTTTCTCGGGCCGCTCTCCGA
GATCTACGGTCGAGTGATTGTCCTACAGTTAGCCAATCTACTATATCTTG
TCTTCAACATCGGCTGCGGCGTATCACAGACCAAAGTACAAATGATCGTC
TGTCGATTCTTCGCCGGATTAGGCGGTAGCGCTCCACTAGCAATGTCCAA
AGAACATTCACTTTCGGATACCGGGTCCACTAGGTCGAGGTCTACGTCGC
TGTCTAGCTCAGATGATGGGTCCTTGTCGGGCCGGCCTTACAGACTGGGG
ACATTGAGGACGCGAACGAGATCAGGGTCCAGACACAGTACAGCACAGGT
GGAACGAGTGCATTCCGGAAGGCATCTCGATGATCATTCTGTCTACCACA
GCGATAATGAGCTGGATCTGGACTCACCGTCCGATGACAGAGGGGAAAAG
GACGAACCTGTCCTTGAAGTACGCGGGGGTGTGGTGAACGAGCGTGACCG
TGATCTGGAAGCTGGAGCCCAGGCTGCAGCAGGCTTGGAAAAGTCACGGA
CTGCACGGTCGGACAAATCCAGAGCAGATCCTAAACTGATCGGTGGTGGC
GTCCTCTCGGACTGCTTCAAGCCCGAACAGCGCGGCAAAAGCGTCGCTAT
CTACAGTCTGGCACCTCTCCTCGGCCCAGCCGTCGGACCCATCGCAGGCG
GCTTCATCGCCGAAAACACAACCTGGCGATGGGTATTCTACGCGACCTCC
ATCGCCGACGGATTGATCCAAGTAGCCGGCCTCTTCTTCCTCCAAGAAAC
CTACGCCCCAATCATCCTCAAAAAGCGCGCCCAGAAACTCCGCAAAGAAA
CCAACGATACCAACTACCAAACCGAATTCGAGCGCCAAAACAAAACCTTC
GGGCAGGTTATGCGCGCCGCACTCATTCGCCCCTTCCGCCTCCTCTCCAC
CCAACCCATCGTCCAAGCCCTCGCCGCCTACATGGCCTACATCTACGGCA
CAATGTACCTCGTGCTCTCGACCTTCCCCTCCCTCTGGACCAGCCCGGAA
TACTACAACGAATCCACCGGCATCGGCGGCCTGAACTACATCTCCCTCGG
TCTGGGCTTCTGGCTCGGCTCTCAGATCTGCGCCCCGCTAAACGATCGTA
TCTACCGTCGTCTGAAAGGTAAAAACAACGGCATGGGGAAGCCCGAGTTC
CGCGTCCCGCTGCTGTTCGTCGGCGCATTTCTCATCCCCTCGGGCCTGTT
CATCTACGGCTGGACAGCCCAGACACACTGCCACTGGATCGCTCCGAACA
TCGGTGCCTGCATGTACGGAATGGGCAATATCATCTCCTTCCAATGTCTG
CAGACGTATATCGTCGACTCGTACACGCGGTTCGCCGCCAGCGCATTAGC
AGCAGTGGCGTGTATGCGCTCGCTCGCGGGTTTCGGGTTCCCGTTATTCG
CACCGTATATGTATCAAGCGCTGGACTATGGGTGGGGGAATAGCTTGTTG
GCCTTTATTGCAATAGCGCTGGGGGTGCCGGCGCCGGTGTTTTTGTGGAA
GTTTGGGGAGAAGTTACGGAAGATGAGTACATATGCGGCTGGTTGAGTTA
CTTGGGATGGCCCCGATGATCCGGAGAACCCCAAAAATTGGCCAATGAAG
AAGAAGTGGGCGGCGGTGGTGACAGTATCCTGCTTCACGTTCATCTCGCC
CGTGTCCTCTTCCATGGTGGCACCAGCCCTTAGTTCGATATCTAAAGACT
TCAACATCACGGACGAGGTCATCTCACAGCTCACCCTGTCCGTGTTTATC
CTGGCTTACGCTGTCGGGCCGCTCTTTCTCGGGCCGCTCTCCGAGATCTA
CGGTCGAGTGATTGTCCTACAGTTAGCCAATCTACTATATCTTGTCTTCA
ACATCGGCTGCGGCGTATCACAGACCAAAGTACAAATGATCGTCTGTCGA
TTCTTCGCCGGATTAGGCGGTAGCGCTCCACTAGCAATGTCCAAAGAACA
TTCACTTTCGGATACCGGGTCCACTAGGTCGAGGTCTACGTCGCTGTCTA
GCTCAGATGATGGGTCCTTGTCGGGCCGGCCTTACAGACTGGGGACATTG
AGGACGCGAACGAGATCAGGGTCCAGACACAGTACAGCACAGGTGGAACG
AGTGCATTCCGGAAGGCATCTCGATGATCATTCTGTCTACCACAGCGATA
ATGAGCTGGATCTGGACTCACCGTCCGATGACAGAGGGGAAAAGGACGAA
CCTGTCCTTGAAGTACGCGGGGGTGTGGTGAACGAGCGTGACCGTGATCT
GGAAGCTGGAGCCCAGGCTGCAGCAGGCTTGGAAAAGTCACGGACTGCAC
GGTCGGACAAATCCAGAGCAGATCCTAAACTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003334-T1.utr3p1 | KJC3_003334-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003334-T1.utr5p1 | KJC3_003334-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1650329..1652564 - |
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