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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1670875..1672406+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003340-T1 ID=KJC3_003340-T1|Name=KJC3_003340-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1532bp|location=Sequence derived from alignment at ch3:1670875..1672406+ (Aspergillus niger KJC3)
TGAACATGCTGGCTGAACCTCTCTCCATCTTTCTTTCACAGAATGCTTCA
ACTTGAGCCCCTCATCCCATCCACGGACCTTTGGCCGGGTGGCATCCCAG
CATGTCTTCGTGTAGAGCCCAGTTCCGTAGAATGGTTTGATATGGCCGAA
ATAACCAAAGGCTGGCTCCAGTTTGTGCAGGTTCGGACCAGCCAAACAAT
CGGCTTTCTCTTGCAAGGAATCCATCTGACAGGAATCATAGGAAGAATGG
ACCGAATCAGAGAGTCTGGATGAGCAGCTCCAGCAACGCCGCCGCCTAAT
GGAACGATGGGCGTCTGCGAGTCAAGACTTCCGTGACGTAAACTAAGTCC
TGTCACTTTCAGTGGTCTAAAACCAGCATTGATCTTGGATAATTTTAGTC
TTATCAAGCTCGCGCGTCGCTACCCGAATCAGGCATCGAATATTCCCTGC
CTTTGCGTACTCGAATCCGACATTCACCGAAGGAATTCTTGTGTCTGGCG
CCTGTAGATCCCGAAAACCACGCGACCAATTACACCCGTCTCGTCAAGCT
ACTAATACTCCTTTACACTTCCATACATCACGGAGGCATGTCGCATCCGA
TGGGTCACGAGCCTGATCCATACCCGCAAATCCCAGCAGTATTCCCGGAT
CATACCAGATGTCCACCAACCCCAGAGGCCTTGATACCACAGTATTGCCT
TGAGTCCGCGGATTTTCGCTATTTATCAATGACGCACACTGGAACAGTAC
TATTCCCAGGCTTTTTCAATACCATTTTCATAGTGATTGACCAGGAAGCT
TTGAATACTGGCCAGCTAATCTTGCTTGAACTTCGCCCGAACGGACAGAT
CGAAGATTGTACGCGTATACGACCTTGGCACGCAGGGAAGATCATGTTAT
TTCACAACGCTCTAGGATGGTTTTTGAGCGAAATGAGCGGCAAACGGGAA
CGCTCCTCTTGGCTCCCGGGGAACTACCCGTAAGCCAATCTCCCACAACC
GCTCCAATTATTGAAAAAAAATCCGGAACTATGGAATTTTGCTGACCAAA
CGTGACTTTCTTTCCTTCTCCTGCATGTACAGTCTGAATCTAGATCAGCC
ACTAGTCGATATTATCGACTCGGCCCAGCAGAAACGCGAAATCGACATCC
GAGGATTCACACGGGAGCTCTTGACGGCGCAGCTGGAGGTCTTTGCGCCA
GGATATCTTGCGTTGGAAAAACAAGGTTTGGAAGTTCAATATGATCTTGC
CAATTTGATGGCTGGAGATGATATCCGCAGCTATAATTATATGATTCCCA
TGGGAGATCCCGCCCGGAGACAGGCACCGTCAAGACAGTGAGGAACGGGG
GACTCACTATGCACCTTTGCATTTGTCCCATAACGCGTATATATTGTGGC
TCGCATCTGTCTGTGTTTCACCGTTTTACTCGATTATTATTCCACTAGAA
ATCATTCGTCGGAAATATCCCAAAATATGCCCCTCTTCGTGGTTCATGTG
TTCATCTATTTTAGGAAATCTATGTGGCTTAC back to topCoding sequence (CDS) from alignment at ch3:1670875..1672406+ >KJC3_003340-T1 ID=KJC3_003340-T1|Name=KJC3_003340-T1|organism=Aspergillus niger KJC3|type=CDS|length=4296bp|location=Sequence derived from alignment at ch3:1670875..1672406+ (Aspergillus niger KJC3)
ATGCTTCAACTTGAGCCCCTCATCCCATCCACGGACCTTTGGCCGGGTGG
CATCCCAGCATGTCTTCGTGTAGAGCCCAGTTCCGTAGAATGGTTTGATA
TGGCCGAAATAACCAAAGGCTGGCTCCAGTTTGTGCAGGAAGAATGGACC
GAATCAGAGAGTCTGGATGAGCAGCTCCAGCAACGCCGCCGCCTAATGGA
ACGATGGGCGTCTGCGAGTCAAGACTTCCGTGACTCTTATCAAGCTCGCG
CGTCGCTACCCGAATCAGGCATCGAATATTCCCTGCCTTTGCGTACTCGA
ATCCGACATTCACCGAAGGAATTCTTGTGTCTGGCGCCTGTAGATCCCGA
AAACCACGCGACCAATTACACCCGTCTCGTCAAGCTACTAATACTCCTTT
ACACTTCCATACATCACGGAGGCATGTCGCATCCGATGGGTCACGAGCCT
GATCCATACCCGCAAATCCCAGCAGTATTCCCGGATCATACCAGATGTCC
ACCAACCCCAGAGGCCTTGATACCACAGTATTGCCTTGAGTCCGCGGATT
TTCGCTATTTATCAATGACGCACACTGGAACAGTACTATTCCCAGGCTTT
TTCAATACCATTTTCATAGTGATTGACCAGGAAGCTTTGAATACTGGCCA
GCTAATCTTGCTTGAACTTCGCCCGAACGGACAGATCGAAGATTGTACGC
GTATACGACCTTGGCACGCAGGGAAGATCATGTTATTTCACAACGCTCTA
GGATGGTTTTTGAGCGAAATGAGCGGCAAACGGGAACGCTCCTCTTGGCT
CCCGGGGAACTACCCTCTGAATCTAGATCAGCCACTAGTCGATATTATCG
ACTCGGCCCAGCAGAAACGCGAAATCGACATCCGAGGATTCACACGGGAG
CTCTTGACGGCGCAGCTGGAGGTCTTTGCGCCAGGATATCTTGCGTTGGA
AAAACAAGGTTTGGAAGTTCAATATGATCTTGCCAATTTGATGGCTGGAG
ATGATATCCGCAGCTATAATTATATGATTCCCATGGGAGATCCCGCCCGG
AGACAGGCACCGTCAAGACAGTGAATGCTTCAACTTGAGCCCCTCATCCC
ATCCACGGACCTTTGGCCGGGTGGCATCCCAGCATGTCTTCGTGTAGAGC
CCAGTTCCGTAGAATGGTTTGATATGGCCGAAATAACCAAAGGCTGGCTC
CAGTTTGTGCAGGAAGAATGGACCGAATCAGAGAGTCTGGATGAGCAGCT
CCAGCAACGCCGCCGCCTAATGGAACGATGGGCGTCTGCGAGTCAAGACT
TCCGTGACTCTTATCAAGCTCGCGCGTCGCTACCCGAATCAGGCATCGAA
TATTCCCTGCCTTTGCGTACTCGAATCCGACATTCACCGAAGGAATTCTT
GTGTCTGGCGCCTGTAGATCCCGAAAACCACGCGACCAATTACACCCGTC
TCGTCAAGCTACTAATACTCCTTTACACTTCCATACATCACGGAGGCATG
TCGCATCCGATGGGTCACGAGCCTGATCCATACCCGCAAATCCCAGCAGT
ATTCCCGGATCATACCAGATGTCCACCAACCCCAGAGGCCTTGATACCAC
AGTATTGCCTTGAGTCCGCGGATTTTCGCTATTTATCAATGACGCACACT
GGAACAGTACTATTCCCAGGCTTTTTCAATACCATTTTCATAGTGATTGA
CCAGGAAGCTTTGAATACTGGCCAGCTAATCTTGCTTGAACTTCGCCCGA
ACGGACAGATCGAAGATTGTACGCGTATACGACCTTGGCACGCAGGGAAG
ATCATGTTATTTCACAACGCTCTAGGATGGTTTTTGAGCGAAATGAGCGG
CAAACGGGAACGCTCCTCTTGGCTCCCGGGGAACTACCCTCTGAATCTAG
ATCAGCCACTAGTCGATATTATCGACTCGGCCCAGCAGAAACGCGAAATC
GACATCCGAGGATTCACACGGGAGCTCTTGACGGCGCAGCTGGAGGTCTT
TGCGCCAGGATATCTTGCGTTGGAAAAACAAGGTTTGGAAGTTCAATATG
ATCTTGCCAATTTGATGGCTGGAGATGATATCCGCAGCTATAATTATATG
ATTCCCATGGGAGATCCCGCCCGGAGACAGGCACCGTCAAGACAGTGAAT
GCTTCAACTTGAGCCCCTCATCCCATCCACGGACCTTTGGCCGGGTGGCA
TCCCAGCATGTCTTCGTGTAGAGCCCAGTTCCGTAGAATGGTTTGATATG
GCCGAAATAACCAAAGGCTGGCTCCAGTTTGTGCAGGAAGAATGGACCGA
ATCAGAGAGTCTGGATGAGCAGCTCCAGCAACGCCGCCGCCTAATGGAAC
GATGGGCGTCTGCGAGTCAAGACTTCCGTGACTCTTATCAAGCTCGCGCG
TCGCTACCCGAATCAGGCATCGAATATTCCCTGCCTTTGCGTACTCGAAT
CCGACATTCACCGAAGGAATTCTTGTGTCTGGCGCCTGTAGATCCCGAAA
ACCACGCGACCAATTACACCCGTCTCGTCAAGCTACTAATACTCCTTTAC
ACTTCCATACATCACGGAGGCATGTCGCATCCGATGGGTCACGAGCCTGA
TCCATACCCGCAAATCCCAGCAGTATTCCCGGATCATACCAGATGTCCAC
CAACCCCAGAGGCCTTGATACCACAGTATTGCCTTGAGTCCGCGGATTTT
CGCTATTTATCAATGACGCACACTGGAACAGTACTATTCCCAGGCTTTTT
CAATACCATTTTCATAGTGATTGACCAGGAAGCTTTGAATACTGGCCAGC
TAATCTTGCTTGAACTTCGCCCGAACGGACAGATCGAAGATTGTACGCGT
ATACGACCTTGGCACGCAGGGAAGATCATGTTATTTCACAACGCTCTAGG
ATGGTTTTTGAGCGAAATGAGCGGCAAACGGGAACGCTCCTCTTGGCTCC
CGGGGAACTACCCTCTGAATCTAGATCAGCCACTAGTCGATATTATCGAC
TCGGCCCAGCAGAAACGCGAAATCGACATCCGAGGATTCACACGGGAGCT
CTTGACGGCGCAGCTGGAGGTCTTTGCGCCAGGATATCTTGCGTTGGAAA
AACAAGGTTTGGAAGTTCAATATGATCTTGCCAATTTGATGGCTGGAGAT
GATATCCGCAGCTATAATTATATGATTCCCATGGGAGATCCCGCCCGGAG
ACAGGCACCGTCAAGACAGTGAATGCTTCAACTTGAGCCCCTCATCCCAT
CCACGGACCTTTGGCCGGGTGGCATCCCAGCATGTCTTCGTGTAGAGCCC
AGTTCCGTAGAATGGTTTGATATGGCCGAAATAACCAAAGGCTGGCTCCA
GTTTGTGCAGGAAGAATGGACCGAATCAGAGAGTCTGGATGAGCAGCTCC
AGCAACGCCGCCGCCTAATGGAACGATGGGCGTCTGCGAGTCAAGACTTC
CGTGACTCTTATCAAGCTCGCGCGTCGCTACCCGAATCAGGCATCGAATA
TTCCCTGCCTTTGCGTACTCGAATCCGACATTCACCGAAGGAATTCTTGT
GTCTGGCGCCTGTAGATCCCGAAAACCACGCGACCAATTACACCCGTCTC
GTCAAGCTACTAATACTCCTTTACACTTCCATACATCACGGAGGCATGTC
GCATCCGATGGGTCACGAGCCTGATCCATACCCGCAAATCCCAGCAGTAT
TCCCGGATCATACCAGATGTCCACCAACCCCAGAGGCCTTGATACCACAG
TATTGCCTTGAGTCCGCGGATTTTCGCTATTTATCAATGACGCACACTGG
AACAGTACTATTCCCAGGCTTTTTCAATACCATTTTCATAGTGATTGACC
AGGAAGCTTTGAATACTGGCCAGCTAATCTTGCTTGAACTTCGCCCGAAC
GGACAGATCGAAGATTGTACGCGTATACGACCTTGGCACGCAGGGAAGAT
CATGTTATTTCACAACGCTCTAGGATGGTTTTTGAGCGAAATGAGCGGCA
AACGGGAACGCTCCTCTTGGCTCCCGGGGAACTACCCTCTGAATCTAGAT
CAGCCACTAGTCGATATTATCGACTCGGCCCAGCAGAAACGCGAAATCGA
CATCCGAGGATTCACACGGGAGCTCTTGACGGCGCAGCTGGAGGTCTTTG
CGCCAGGATATCTTGCGTTGGAAAAACAAGGTTTGGAAGTTCAATATGAT
CTTGCCAATTTGATGGCTGGAGATGATATCCGCAGCTATAATTATATGAT
TCCCATGGGAGATCCCGCCCGGAGACAGGCACCGTCAAGACAGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003340-T1.utr5p1 | KJC3_003340-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003340-T1.utr3p1 | KJC3_003340-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1670875..1672406 + |
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