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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1689651..1690495- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003349-T1 ID=KJC3_003349-T1|Name=KJC3_003349-T1|organism=Aspergillus niger KJC3|type=mRNA|length=845bp|location=Sequence derived from alignment at ch3:1689651..1690495- (Aspergillus niger KJC3)
ATGCCCAACCCAACACTAGTCTTCTGTGCCGGTGCCTGGTACTCACCAGT
AGCATTCGGCCCACTCATCGAAAAGCTCCCCGACTATACCTGCCGTACCG
TGGCCTTCCCCTCCATCGAGCAAGCCACTGAGGTCAAAGACCTCCAACCG
GATATTACCGCAGTCCGCAGTGTCGTCGAAGAGGAATGCGATGCCGGAAA
TGACGTTGCAATTGTCTTGCACAGCTGGTCTGGTCTCCCCGTCAGCAGTG
CCCTCGATGGACTCAGCAAGACGGAGCGCCAAGAAGCGGGTAAACCAGGC
GGCGTGGTGAAGCTCATTTACCTCTCGGCTTTCATTCCAGATGTTGGCGA
GAGTTTGATTGGGGCGTTCGGAGGGGTGGCGCCGGACTGGTATGTTCGGG
ATGTGAGTATACCTTCTCCGTTAGTTGTATGTTAATAAAAGTGAATTTCT
AATGTGGTATAGGTGGAGAATGGCACCGTGACGCCGGATGATCCTTTCAA
GTTATTCTTCCACGATGTTCCCGATGGACAGAAATGGGCCGAAACACTAC
GACCTCATGCATGGGCGACTAAGAATAGCCCTGCCACGAGTGCAGCGTAC
CTGCGAATTCCAAGTGCCTATCTGCTATGTGAAGATGATCGGGCAATTCC
ATTATTTGCGCAAGAAGGGATGGTCGAAAAAGCACGAGCTAAGGGAGCCA
CGTTCGAGACAGACAAGGTTAAGACGGGACATACGCCGTGGCTGGTGGTG
CCGGACCAAGTGGTGGAGTTTGTGAAGAGACATGCATGAGATTAATATAA
GTAATTTATAGAGCAGCCAATTCGATTGATCGAATCCTTCCATCC back to topCoding sequence (CDS) from alignment at ch3:1689651..1690495- >KJC3_003349-T1 ID=KJC3_003349-T1|Name=KJC3_003349-T1|organism=Aspergillus niger KJC3|type=CDS|length=1458bp|location=Sequence derived from alignment at ch3:1689651..1690495- (Aspergillus niger KJC3)
GTGGAGAATGGCACCGTGACGCCGGATGATCCTTTCAAGTTATTCTTCCA
CGATGTTCCCGATGGACAGAAATGGGCCGAAACACTACGACCTCATGCAT
GGGCGACTAAGAATAGCCCTGCCACGAGTGCAGCGTACCTGCGAATTCCA
AGTGCCTATCTGCTATGTGAAGATGATCGGGCAATTCCATTATTTGCGCA
AGAAGGGATGGTCGAAAAAGCACGAGCTAAGGGAGCCACGTTCGAGACAG
ACAAGGTTAAGACGGGACATACGCCGTGGCTGGTGGTGCCGGACCAAGTG
GTGGAGTTTGTGAAGAGACATGCATGAATGCCCAACCCAACACTAGTCTT
CTGTGCCGGTGCCTGGTACTCACCAGTAGCATTCGGCCCACTCATCGAAA
AGCTCCCCGACTATACCTGCCGTACCGTGGCCTTCCCCTCCATCGAGCAA
GCCACTGAGGTCAAAGACCTCCAACCGGATATTACCGCAGTCCGCAGTGT
CGTCGAAGAGGAATGCGATGCCGGAAATGACGTTGCAATTGTCTTGCACA
GCTGGTCTGGTCTCCCCGTCAGCAGTGCCCTCGATGGACTCAGCAAGACG
GAGCGCCAAGAAGCGGGTAAACCAGGCGGCGTGGTGAAGCTCATTTACCT
CTCGGCTTTCATTCCAGATGTTGGCGAGAGTTTGATTGGGGCGTTCGGAG
GGGTGGCGCCGGACTGGTATGTTCGGGATGTGGAGAATGGCACCGTGACG
CCGGATGATCCTTTCAAGTTATTCTTCCACGATGTTCCCGATGGACAGAA
ATGGGCCGAAACACTACGACCTCATGCATGGGCGACTAAGAATAGCCCTG
CCACGAGTGCAGCGTACCTGCGAATTCCAAGTGCCTATCTGCTATGTGAA
GATGATCGGGCAATTCCATTATTTGCGCAAGAAGGGATGGTCGAAAAAGC
ACGAGCTAAGGGAGCCACGTTCGAGACAGACAAGGTTAAGACGGGACATA
CGCCGTGGCTGGTGGTGCCGGACCAAGTGGTGGAGTTTGTGAAGAGACAT
GCATGAATGCCCAACCCAACACTAGTCTTCTGTGCCGGTGCCTGGTACTC
ACCAGTAGCATTCGGCCCACTCATCGAAAAGCTCCCCGACTATACCTGCC
GTACCGTGGCCTTCCCCTCCATCGAGCAAGCCACTGAGGTCAAAGACCTC
CAACCGGATATTACCGCAGTCCGCAGTGTCGTCGAAGAGGAATGCGATGC
CGGAAATGACGTTGCAATTGTCTTGCACAGCTGGTCTGGTCTCCCCGTCA
GCAGTGCCCTCGATGGACTCAGCAAGACGGAGCGCCAAGAAGCGGGTAAA
CCAGGCGGCGTGGTGAAGCTCATTTACCTCTCGGCTTTCATTCCAGATGT
TGGCGAGAGTTTGATTGGGGCGTTCGGAGGGGTGGCGCCGGACTGGTATG
TTCGGGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003349-T1.utr3p1 | KJC3_003349-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.4 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR000073 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1689651..1690495 - |
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