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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1695228..1696308- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003351-T1 ID=KJC3_003351-T1|Name=KJC3_003351-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1081bp|location=Sequence derived from alignment at ch3:1695228..1696308- (Aspergillus niger KJC3)
GTAGAGTTTGACCTACACGATCTGAAACTTGCTTATCTTCAATCATCTAC
CACCACATAGATCATCATATATATCGGAGACTCTACTACCTAGTACCCTC
CATTAGTAGCTCAATTTTGCAACCCCTGAGATATATACATAGTATCAACA
CACAACTGCATCAAAATGGGCCAAACCCCCTCTACACCCCAGCCCGGCAC
CAAACTTCAAGTTATCGGCGCAGGCCTCCCCCGCACCGGCACAGCATCCT
TCAGCGCGGCCTTAGCTATCCTCCTCGACGGCCCCGTCTACCACGGCGGT
ACGCAGACAACAATAGGCCCACCAGACGAAATCACGACATGGATGAAAAT
CATGCGCCTCGTACTCAACGAAAACCCCCTTGACCGACAACAAGCCCTCA
CCCTCATCGACCACCAATTAGACGGATACGCCGCCATCACCGATGCCCCC
GGTTCCCAACTCGTCCCGGAGCTGGTGGAAGTCTACCCCGACGCCAAGGT
CATCTGCACCGTTCGCGATCCGGTAGCGTGGGGTAAGAGCATGACACAGG
TGGAGGGTCTTGTGCGATCACCGTGGTTTCTTCAAGTCATGTTGCTGCCG
CTTCCCGGGATGAGGCATTTCGTGGATTATCTGGGGTTGACTGCGTTGCA
GTGGCGAAGGATTTATGGGAGGAATGGGGGCCCCGGAGGTGCTTATCATA
AACATATTGAGTGGCTGAAGGAGGTTGTTCCGGAGGAGAGGTTGGTGTTT
GTTGATGTTAGGGATGGGTGGGAGCCGCTGTGCAGGGCGCTGGGGAAGGA
GGTGCCGAAGGGTATACCATTCCCGCGAATCAATGATTCCGAGGCGATAA
CCCGGACTGTAAGACAGCATGTTCGTCGTGGGTTGATTCGGTGGGTGGGT
CTGTTTGCTGTCGTTGGTGCAGTATCTTCTGGCGTGTATTTTCTGCAGAG
GTGAAGAGAGTGTGATTGGCGTGTATTATTTATTCGTCTTTAAGCTCTCC
ATGGGATCCAGGAGGAGATACTAACCGGAGAGGGGGTTGTGTCAGTCACA
TTTGTATATATTTAATAATGTATACCCATTC back to topCoding sequence (CDS) from alignment at ch3:1695228..1696308- >KJC3_003351-T1 ID=KJC3_003351-T1|Name=KJC3_003351-T1|organism=Aspergillus niger KJC3|type=CDS|length=789bp|location=Sequence derived from alignment at ch3:1695228..1696308- (Aspergillus niger KJC3)
ATGGGCCAAACCCCCTCTACACCCCAGCCCGGCACCAAACTTCAAGTTAT
CGGCGCAGGCCTCCCCCGCACCGGCACAGCATCCTTCAGCGCGGCCTTAG
CTATCCTCCTCGACGGCCCCGTCTACCACGGCGGTACGCAGACAACAATA
GGCCCACCAGACGAAATCACGACATGGATGAAAATCATGCGCCTCGTACT
CAACGAAAACCCCCTTGACCGACAACAAGCCCTCACCCTCATCGACCACC
AATTAGACGGATACGCCGCCATCACCGATGCCCCCGGTTCCCAACTCGTC
CCGGAGCTGGTGGAAGTCTACCCCGACGCCAAGGTCATCTGCACCGTTCG
CGATCCGGTAGCGTGGGGTAAGAGCATGACACAGGTGGAGGGTCTTGTGC
GATCACCGTGGTTTCTTCAAGTCATGTTGCTGCCGCTTCCCGGGATGAGG
CATTTCGTGGATTATCTGGGGTTGACTGCGTTGCAGTGGCGAAGGATTTA
TGGGAGGAATGGGGGCCCCGGAGGTGCTTATCATAAACATATTGAGTGGC
TGAAGGAGGTTGTTCCGGAGGAGAGGTTGGTGTTTGTTGATGTTAGGGAT
GGGTGGGAGCCGCTGTGCAGGGCGCTGGGGAAGGAGGTGCCGAAGGGTAT
ACCATTCCCGCGAATCAATGATTCCGAGGCGATAACCCGGACTGTAAGAC
AGCATGTTCGTCGTGGGTTGATTCGGTGGGTGGGTCTGTTTGCTGTCGTT
GGTGCAGTATCTTCTGGCGTGTATTTTCTGCAGAGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003351-T1.utr3p1 | KJC3_003351-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003351-T1.utr5p1 | KJC3_003351-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.4 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR040632 |
| DBxref | PFAM:PF17784 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1695228..1696308 - |
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