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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1719773..1720751+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003358-T1 ID=KJC3_003358-T1|Name=KJC3_003358-T1|organism=Aspergillus niger KJC3|type=mRNA|length=979bp|location=Sequence derived from alignment at ch3:1719773..1720751+ (Aspergillus niger KJC3)
CAACCACTTTCAACCATTCACACGAGGCTTAATTACCAACACAATGACCA
CCGAAAAGCCCTCAATCGTGCTCATCCAGGGCTCTTTCCAAACACCCCTC
GTCTACGCTAAGTTAACGACAGGACTTCGTGACCTGGGATACCCCCTTAT
CCACCCATCCCTCCCCAGCTGCACCGATGTAGAGGCGGATGACTTCCCCA
CCCGCACAATGGAGGATGACGCACGCACCGTCACCGAAACCCTACAGCAG
CTCATAGAAAAAGAGGGAACATCCGTCGTCGTTGTCATGCATTCTTATGG
CGGCATTGTGGGTAGTACCGCTATTCCTCAATCCCTCGCCTACACTTCCC
GTCAAGCAGAGGGCAAAAAGGGCGGCGTTTTACATCTGTTCTACTACGCT
GCCTTTGTTCTACCCGAGGGTGCATCCGTCATGGGGACATTTGGCGAGTC
GCCGAACAACTATGTGACTGTACGTTTTTCATTAATCCACTAAAAGACCA
AGGACCAACCTAATTCTTTTGCTCTTAGTCGGACGGCCGTTTCCGTATCA
CCAACGGGGCCGAAATTCTGTACAGCGATCTCCCGGACGCCGAAGCAGCC
CTGTGGGAATCGCGCCTCATTCCGCAATCTCACTTGGTACAAACCACGCC
CACGACTCGTGCGGCGTACGAGTACCTGCCATCTACTTATCTCATCTGTG
AGGGTGATCAGGCCGCACCTGTCGCATTTCAGGGCGGATTTGCCAAGTTG
GCTCGGGCGGAGATTGATCGCTGTAGCGCGGGTCATTCGCCGATGCTGAG
CCAGCCGGAGATGCTGGTGGGGAAGATTGCGGCAGTCGTGGAGAAGGCAG
TTGCGGCGTCTACTTAGATTACGCTAGAGTGAACTAGAAATTATTTAATA
TGTGAGGTAGTCATAGAGATGATGATAGAGATTAGATTAGAATCTTGAGA
AGATGACATCTAGAATGCAACAAGCACCG back to topCoding sequence (CDS) from alignment at ch3:1719773..1720751+ >KJC3_003358-T1 ID=KJC3_003358-T1|Name=KJC3_003358-T1|organism=Aspergillus niger KJC3|type=CDS|length=1530bp|location=Sequence derived from alignment at ch3:1719773..1720751+ (Aspergillus niger KJC3)
ATGACCACCGAAAAGCCCTCAATCGTGCTCATCCAGGGCTCTTTCCAAAC
ACCCCTCGTCTACGCTAAGTTAACGACAGGACTTCGTGACCTGGGATACC
CCCTTATCCACCCATCCCTCCCCAGCTGCACCGATGTAGAGGCGGATGAC
TTCCCCACCCGCACAATGGAGGATGACGCACGCACCGTCACCGAAACCCT
ACAGCAGCTCATAGAAAAAGAGGGAACATCCGTCGTCGTTGTCATGCATT
CTTATGGCGGCATTGTGGGTAGTACCGCTATTCCTCAATCCCTCGCCTAC
ACTTCCCGTCAAGCAGAGGGCAAAAAGGGCGGCGTTTTACATCTGTTCTA
CTACGCTGCCTTTGTTCTACCCGAGGGTGCATCCGTCATGGGGACATTTG
GCGAGTCGCCGAACAACTATGTGACTTCGGACGGCCGTTTCCGTATCACC
AACGGGGCCGAAATTCTGTACAGCGATCTCCCGGACGCCGAAGCAGCCCT
GTGGGAATCGCGCCTCATTCCGCAATCTCACTTGGTACAAACCACGCCCA
CGACTCGTGCGGCGTACGAGTACCTGCCATCTACTTATCTCATCTGTGAG
GGTGATCAGGCCGCACCTGTCGCATTTCAGGGCGGATTTGCCAAGTTGGC
TCGGGCGGAGATTGATCGCTGTAGCGCGGGTCATTCGCCGATGCTGAGCC
AGCCGGAGATGCTGGTGGGGAAGATTGCGGCAGTCGTGGAGAAGGCAGTT
GCGGCGTCTACTTAGATGACCACCGAAAAGCCCTCAATCGTGCTCATCCA
GGGCTCTTTCCAAACACCCCTCGTCTACGCTAAGTTAACGACAGGACTTC
GTGACCTGGGATACCCCCTTATCCACCCATCCCTCCCCAGCTGCACCGAT
GTAGAGGCGGATGACTTCCCCACCCGCACAATGGAGGATGACGCACGCAC
CGTCACCGAAACCCTACAGCAGCTCATAGAAAAAGAGGGAACATCCGTCG
TCGTTGTCATGCATTCTTATGGCGGCATTGTGGGTAGTACCGCTATTCCT
CAATCCCTCGCCTACACTTCCCGTCAAGCAGAGGGCAAAAAGGGCGGCGT
TTTACATCTGTTCTACTACGCTGCCTTTGTTCTACCCGAGGGTGCATCCG
TCATGGGGACATTTGGCGAGTCGCCGAACAACTATGTGACTTCGGACGGC
CGTTTCCGTATCACCAACGGGGCCGAAATTCTGTACAGCGATCTCCCGGA
CGCCGAAGCAGCCCTGTGGGAATCGCGCCTCATTCCGCAATCTCACTTGG
TACAAACCACGCCCACGACTCGTGCGGCGTACGAGTACCTGCCATCTACT
TATCTCATCTGTGAGGGTGATCAGGCCGCACCTGTCGCATTTCAGGGCGG
ATTTGCCAAGTTGGCTCGGGCGGAGATTGATCGCTGTAGCGCGGGTCATT
CGCCGATGCTGAGCCAGCCGGAGATGCTGGTGGGGAAGATTGCGGCAGTC
GTGGAGAAGGCAGTTGCGGCGTCTACTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003358-T1.utr5p1 | KJC3_003358-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003358-T1.utr3p1 | KJC3_003358-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.4 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR000073 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1719773..1720751 + |
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