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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1722639..1724885+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003359-T1 ID=KJC3_003359-T1|Name=KJC3_003359-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2247bp|location=Sequence derived from alignment at ch3:1722639..1724885+ (Aspergillus niger KJC3)
CAACTTTATCGGCAACCCGAGGTTGATGGTAACTTTTGACGCGTAACGCA
TTGGTCAACATGGCGGCTGTCGAACTTGTTACGCAAGGGACGGCCTACGG
CCTCCTCATCGGTCTTGGTGTGTTCTTCTGCGGGGTGATTCTCATCGCAA
TCAAGGTGCAGAAGGCGTATCTGTCTGAAGACTCGGGTACGTCAGAGATG
TTCATGGTCGCAAATCGATCGGTCGGTACGGGTTTGACTGCATCTGCTGT
GTTCTCCTCGTGGATGTGGATCAACGAGACGGTGCTATCGGCTGCGATGT
GTTATCGCTATGGATTGGCAGTTCCACTGGTATGTCAGCAGGCTCTCTTT
TAATTTTATGACAGATGCTGATTTGACTGTTCGTACAGTGGTGGGGATCG
GGTCTTTGTTTTCAGATCGCCTTGATGGCTGCTCTTGGTGTCATGGCCAA
GATCCGGGTTCCGTATGCCCATACGTCGCTTGAGATCACTCGTATGCGAT
ATGGCTGGATCGGACATGTCATCTACATGGTTTTGAATCTGACAAACAAC
GTTTTTGGTTGTGCCTCGATGATCTTGACCGGCTCCCAGCTGATAAACGG
TGTTTCGGGCATGAACTTCGTTGCGGCAACCATCCTGATTCCTTTGGGAG
GTAAGCTTGGGTCATCGCATATCACAGGGTATTATACTGACGAACAATGG
CAAAGTTGTTCTTTACACGGCTGTTGGAGGGCTGAAAGCGACGTTTTTGA
CCGACTTTTTGCATACCACAGTCGCCTTAATCCTGATCATTTATTTCACA
CTCTCAGTCCTTACTCACCCCGAAGTTGGCGGGTTGGCTGGACTATACGA
CAAGGTGGTCGCAACAGCGAGCGAGAATTATATCTCCGGTAACTTCGAGG
GATCGCTTCTCACGATGAAATCAAAAGGGGCGATTATTTGGGGCTTAATC
TTGAAGTTTGGTAACTTAGCTCTGGTGGTCATGGTAGGCTCATTCTTCCT
TTCCCCCAGTTATATGGCAGACAATCAGACTCACTCGCATTTAGGACACC
GCGTTCTGGCAAAAGTCTTTTGCCAGTGAAGTGAATTCTACCGTGCCGGC
ATACAACCTGGCCGCAATAGCTGTGTTTGGTATCCCCTGGGGCTTAGGCA
CTGTTATTGGCCTGACCGCTCGAGCGCTCCACCACACTCCTCTCTGGCCC
ACCTATCCTATTGATATCACGACAACTGAGGTCAGCAAAGGCATGGTCAT
GCCCTACCTGGTCAAGGCCCTTCTTGGAGAGTCTGGAATGATCGCCTTCT
TTGTTCTCTTGTTCATGGCACTGACCAGCACGGTCTCCTCGTCAATGATC
GCCGTCAGCAGTATCCTGTCGTTTGATATGTACAAGACGTACATCAACCC
CCAAGCCAGTGATCGCCGGCTCTTGGGAGTTAGCCACATAACTGTCGTAT
TCCATGCGATCTTCATCACTGGCATTTCCATTGCTCTTAACTACGGGGGC
GCCAACATGACGTGGATCGGTTACTTCCGGCCTATCCTGTCTTGTCCCGG
AATCATTCCTCTCGGGTTGACTCTGTTCTGGTCCCGTCAGACCCGCCTGG
CGGCTATCCTATCGCCGGTGCTTGGCTTCTTTACTGGTCTTGCGATCTGG
CTCGCAACGGCCAAGTCAATGTATGGGGCCGTGAACATGACCACAACTGG
AGAAGAGCTGCCCGCACTCTATGGTGCCATCGGGTCTTTCTTCTCACCCG
CTCTCTACTCCGTGGTAATTTCTCTATATCGCCCGTACACATTTGACTGG
CGAGAGTTCCTCAGAATCGAACTCGCAGATGAAGCACCGACTAGAGCCAC
GCCCGCTGCAACTCAAGAGACTAAGGTTGAAGGGGTCTATATCTCGACGG
ATGCCAGCCCGACGTCAACCCCGAGCCGCCTCAGTCTAGATGACGTTCGT
CACCCTTTCACAGAAGATACCCTGCGAAAGCTGCATCGATGGTCATGGAT
CGCATGGGCGATGTTTGTGGTCTTGGTGCTGATTACCTTTGTGCTGTGGC
CAATGCCGCTTTATCGCGACTATATCTTCACCAAATCCTTCTTCTCCGGA
TGGACCACGGTCGCGATCATCTGGCAATTCTGTGCCTTTTTCGCTGTTGT
GGTCTACCCACTGTATGACGGACGGTTCGAAATTGCTAAGGGTGTACAAG
GCGTACTGACGTCAAGTCGTGAATTCCTCAACCGACACAAAAATTAG back to topCoding sequence (CDS) from alignment at ch3:1722639..1724885+ >KJC3_003359-T1 ID=KJC3_003359-T1|Name=KJC3_003359-T1|organism=Aspergillus niger KJC3|type=CDS|length=8052bp|location=Sequence derived from alignment at ch3:1722639..1724885+ (Aspergillus niger KJC3)
ATGGCGGCTGTCGAACTTGTTACGCAAGGGACGGCCTACGGCCTCCTCAT
CGGTCTTGGTGTGTTCTTCTGCGGGGTGATTCTCATCGCAATCAAGGTGC
AGAAGGCGTATCTGTCTGAAGACTCGGGTACGTCAGAGATGTTCATGGTC
GCAAATCGATCGGTCGGTACGGGTTTGACTGCATCTGCTGTGTTCTCCTC
GTGGATGTGGATCAACGAGACGGTGCTATCGGCTGCGATGTGTTATCGCT
ATGGATTGGCAGTTCCACTGTGGTGGGGATCGGGTCTTTGTTTTCAGATC
GCCTTGATGGCTGCTCTTGGTGTCATGGCCAAGATCCGGGTTCCGTATGC
CCATACGTCGCTTGAGATCACTCGTATGCGATATGGCTGGATCGGACATG
TCATCTACATGGTTTTGAATCTGACAAACAACGTTTTTGGTTGTGCCTCG
ATGATCTTGACCGGCTCCCAGCTGATAAACGGTGTTTCGGGCATGAACTT
CGTTGCGGCAACCATCCTGATTCCTTTGGGAGTTGTTCTTTACACGGCTG
TTGGAGGGCTGAAAGCGACGTTTTTGACCGACTTTTTGCATACCACAGTC
GCCTTAATCCTGATCATTTATTTCACACTCTCAGTCCTTACTCACCCCGA
AGTTGGCGGGTTGGCTGGACTATACGACAAGGTGGTCGCAACAGCGAGCG
AGAATTATATCTCCGGTAACTTCGAGGGATCGCTTCTCACGATGAAATCA
AAAGGGGCGATTATTTGGGGCTTAATCTTGAAGTTTGGTAACTTAGCTCT
GGTGGTCATGGACACCGCGTTCTGGCAAAAGTCTTTTGCCAGTGAAGTGA
ATTCTACCGTGCCGGCATACAACCTGGCCGCAATAGCTGTGTTTGGTATC
CCCTGGGGCTTAGGCACTGTTATTGGCCTGACCGCTCGAGCGCTCCACCA
CACTCCTCTCTGGCCCACCTATCCTATTGATATCACGACAACTGAGGTCA
GCAAAGGCATGGTCATGCCCTACCTGGTCAAGGCCCTTCTTGGAGAGTCT
GGAATGATCGCCTTCTTTGTTCTCTTGTTCATGGCACTGACCAGCACGGT
CTCCTCGTCAATGATCGCCGTCAGCAGTATCCTGTCGTTTGATATGTACA
AGACGTACATCAACCCCCAAGCCAGTGATCGCCGGCTCTTGGGAGTTAGC
CACATAACTGTCGTATTCCATGCGATCTTCATCACTGGCATTTCCATTGC
TCTTAACTACGGGGGCGCCAACATGACGTGGATCGGTTACTTCCGGCCTA
TCCTGTCTTGTCCCGGAATCATTCCTCTCGGGTTGACTCTGTTCTGGTCC
CGTCAGACCCGCCTGGCGGCTATCCTATCGCCGGTGCTTGGCTTCTTTAC
TGGTCTTGCGATCTGGCTCGCAACGGCCAAGTCAATGTATGGGGCCGTGA
ACATGACCACAACTGGAGAAGAGCTGCCCGCACTCTATGGTGCCATCGGG
TCTTTCTTCTCACCCGCTCTCTACTCCGTGGTAATTTCTCTATATCGCCC
GTACACATTTGACTGGCGAGAGTTCCTCAGAATCGAACTCGCAGATGAAG
CACCGACTAGAGCCACGCCCGCTGCAACTCAAGAGACTAAGGTTGAAGGG
GTCTATATCTCGACGGATGCCAGCCCGACGTCAACCCCGAGCCGCCTCAG
TCTAGATGACGTTCGTCACCCTTTCACAGAAGATACCCTGCGAAAGCTGC
ATCGATGGTCATGGATCGCATGGGCGATGTTTGTGGTCTTGGTGCTGATT
ACCTTTGTGCTGTGGCCAATGCCGCTTTATCGCGACTATATCTTCACCAA
ATCCTTCTTCTCCGGATGGACCACGGTCGCGATCATCTGGCAATTCTGTG
CCTTTTTCGCTGTTGTGGTCTACCCACTGTATGACGGACGGTTCGAAATT
GCTAAGGGTGTACAAGGCGTACTGACGTCAAGTCGTGAATTCCTCAACCG
ACACAAAAATTAGATGGCGGCTGTCGAACTTGTTACGCAAGGGACGGCCT
ACGGCCTCCTCATCGGTCTTGGTGTGTTCTTCTGCGGGGTGATTCTCATC
GCAATCAAGGTGCAGAAGGCGTATCTGTCTGAAGACTCGGGTACGTCAGA
GATGTTCATGGTCGCAAATCGATCGGTCGGTACGGGTTTGACTGCATCTG
CTGTGTTCTCCTCGTGGATGTGGATCAACGAGACGGTGCTATCGGCTGCG
ATGTGTTATCGCTATGGATTGGCAGTTCCACTGTGGTGGGGATCGGGTCT
TTGTTTTCAGATCGCCTTGATGGCTGCTCTTGGTGTCATGGCCAAGATCC
GGGTTCCGTATGCCCATACGTCGCTTGAGATCACTCGTATGCGATATGGC
TGGATCGGACATGTCATCTACATGGTTTTGAATCTGACAAACAACGTTTT
TGGTTGTGCCTCGATGATCTTGACCGGCTCCCAGCTGATAAACGGTGTTT
CGGGCATGAACTTCGTTGCGGCAACCATCCTGATTCCTTTGGGAGTTGTT
CTTTACACGGCTGTTGGAGGGCTGAAAGCGACGTTTTTGACCGACTTTTT
GCATACCACAGTCGCCTTAATCCTGATCATTTATTTCACACTCTCAGTCC
TTACTCACCCCGAAGTTGGCGGGTTGGCTGGACTATACGACAAGGTGGTC
GCAACAGCGAGCGAGAATTATATCTCCGGTAACTTCGAGGGATCGCTTCT
CACGATGAAATCAAAAGGGGCGATTATTTGGGGCTTAATCTTGAAGTTTG
GTAACTTAGCTCTGGTGGTCATGGACACCGCGTTCTGGCAAAAGTCTTTT
GCCAGTGAAGTGAATTCTACCGTGCCGGCATACAACCTGGCCGCAATAGC
TGTGTTTGGTATCCCCTGGGGCTTAGGCACTGTTATTGGCCTGACCGCTC
GAGCGCTCCACCACACTCCTCTCTGGCCCACCTATCCTATTGATATCACG
ACAACTGAGGTCAGCAAAGGCATGGTCATGCCCTACCTGGTCAAGGCCCT
TCTTGGAGAGTCTGGAATGATCGCCTTCTTTGTTCTCTTGTTCATGGCAC
TGACCAGCACGGTCTCCTCGTCAATGATCGCCGTCAGCAGTATCCTGTCG
TTTGATATGTACAAGACGTACATCAACCCCCAAGCCAGTGATCGCCGGCT
CTTGGGAGTTAGCCACATAACTGTCGTATTCCATGCGATCTTCATCACTG
GCATTTCCATTGCTCTTAACTACGGGGGCGCCAACATGACGTGGATCGGT
TACTTCCGGCCTATCCTGTCTTGTCCCGGAATCATTCCTCTCGGGTTGAC
TCTGTTCTGGTCCCGTCAGACCCGCCTGGCGGCTATCCTATCGCCGGTGC
TTGGCTTCTTTACTGGTCTTGCGATCTGGCTCGCAACGGCCAAGTCAATG
TATGGGGCCGTGAACATGACCACAACTGGAGAAGAGCTGCCCGCACTCTA
TGGTGCCATCGGGTCTTTCTTCTCACCCGCTCTCTACTCCGTGGTAATTT
CTCTATATCGCCCGTACACATTTGACTGGCGAGAGTTCCTCAGAATCGAA
CTCGCAGATGAAGCACCGACTAGAGCCACGCCCGCTGCAACTCAAGAGAC
TAAGGTTGAAGGGGTCTATATCTCGACGGATGCCAGCCCGACGTCAACCC
CGAGCCGCCTCAGTCTAGATGACGTTCGTCACCCTTTCACAGAAGATACC
CTGCGAAAGCTGCATCGATGGTCATGGATCGCATGGGCGATGTTTGTGGT
CTTGGTGCTGATTACCTTTGTGCTGTGGCCAATGCCGCTTTATCGCGACT
ATATCTTCACCAAATCCTTCTTCTCCGGATGGACCACGGTCGCGATCATC
TGGCAATTCTGTGCCTTTTTCGCTGTTGTGGTCTACCCACTGTATGACGG
ACGGTTCGAAATTGCTAAGGGTGTACAAGGCGTACTGACGTCAAGTCGTG
AATTCCTCAACCGACACAAAAATTAGATGGCGGCTGTCGAACTTGTTACG
CAAGGGACGGCCTACGGCCTCCTCATCGGTCTTGGTGTGTTCTTCTGCGG
GGTGATTCTCATCGCAATCAAGGTGCAGAAGGCGTATCTGTCTGAAGACT
CGGGTACGTCAGAGATGTTCATGGTCGCAAATCGATCGGTCGGTACGGGT
TTGACTGCATCTGCTGTGTTCTCCTCGTGGATGTGGATCAACGAGACGGT
GCTATCGGCTGCGATGTGTTATCGCTATGGATTGGCAGTTCCACTGTGGT
GGGGATCGGGTCTTTGTTTTCAGATCGCCTTGATGGCTGCTCTTGGTGTC
ATGGCCAAGATCCGGGTTCCGTATGCCCATACGTCGCTTGAGATCACTCG
TATGCGATATGGCTGGATCGGACATGTCATCTACATGGTTTTGAATCTGA
CAAACAACGTTTTTGGTTGTGCCTCGATGATCTTGACCGGCTCCCAGCTG
ATAAACGGTGTTTCGGGCATGAACTTCGTTGCGGCAACCATCCTGATTCC
TTTGGGAGTTGTTCTTTACACGGCTGTTGGAGGGCTGAAAGCGACGTTTT
TGACCGACTTTTTGCATACCACAGTCGCCTTAATCCTGATCATTTATTTC
ACACTCTCAGTCCTTACTCACCCCGAAGTTGGCGGGTTGGCTGGACTATA
CGACAAGGTGGTCGCAACAGCGAGCGAGAATTATATCTCCGGTAACTTCG
AGGGATCGCTTCTCACGATGAAATCAAAAGGGGCGATTATTTGGGGCTTA
ATCTTGAAGTTTGGTAACTTAGCTCTGGTGGTCATGGACACCGCGTTCTG
GCAAAAGTCTTTTGCCAGTGAAGTGAATTCTACCGTGCCGGCATACAACC
TGGCCGCAATAGCTGTGTTTGGTATCCCCTGGGGCTTAGGCACTGTTATT
GGCCTGACCGCTCGAGCGCTCCACCACACTCCTCTCTGGCCCACCTATCC
TATTGATATCACGACAACTGAGGTCAGCAAAGGCATGGTCATGCCCTACC
TGGTCAAGGCCCTTCTTGGAGAGTCTGGAATGATCGCCTTCTTTGTTCTC
TTGTTCATGGCACTGACCAGCACGGTCTCCTCGTCAATGATCGCCGTCAG
CAGTATCCTGTCGTTTGATATGTACAAGACGTACATCAACCCCCAAGCCA
GTGATCGCCGGCTCTTGGGAGTTAGCCACATAACTGTCGTATTCCATGCG
ATCTTCATCACTGGCATTTCCATTGCTCTTAACTACGGGGGCGCCAACAT
GACGTGGATCGGTTACTTCCGGCCTATCCTGTCTTGTCCCGGAATCATTC
CTCTCGGGTTGACTCTGTTCTGGTCCCGTCAGACCCGCCTGGCGGCTATC
CTATCGCCGGTGCTTGGCTTCTTTACTGGTCTTGCGATCTGGCTCGCAAC
GGCCAAGTCAATGTATGGGGCCGTGAACATGACCACAACTGGAGAAGAGC
TGCCCGCACTCTATGGTGCCATCGGGTCTTTCTTCTCACCCGCTCTCTAC
TCCGTGGTAATTTCTCTATATCGCCCGTACACATTTGACTGGCGAGAGTT
CCTCAGAATCGAACTCGCAGATGAAGCACCGACTAGAGCCACGCCCGCTG
CAACTCAAGAGACTAAGGTTGAAGGGGTCTATATCTCGACGGATGCCAGC
CCGACGTCAACCCCGAGCCGCCTCAGTCTAGATGACGTTCGTCACCCTTT
CACAGAAGATACCCTGCGAAAGCTGCATCGATGGTCATGGATCGCATGGG
CGATGTTTGTGGTCTTGGTGCTGATTACCTTTGTGCTGTGGCCAATGCCG
CTTTATCGCGACTATATCTTCACCAAATCCTTCTTCTCCGGATGGACCAC
GGTCGCGATCATCTGGCAATTCTGTGCCTTTTTCGCTGTTGTGGTCTACC
CACTGTATGACGGACGGTTCGAAATTGCTAAGGGTGTACAAGGCGTACTG
ACGTCAAGTCGTGAATTCCTCAACCGACACAAAAATTAGATGGCGGCTGT
CGAACTTGTTACGCAAGGGACGGCCTACGGCCTCCTCATCGGTCTTGGTG
TGTTCTTCTGCGGGGTGATTCTCATCGCAATCAAGGTGCAGAAGGCGTAT
CTGTCTGAAGACTCGGGTACGTCAGAGATGTTCATGGTCGCAAATCGATC
GGTCGGTACGGGTTTGACTGCATCTGCTGTGTTCTCCTCGTGGATGTGGA
TCAACGAGACGGTGCTATCGGCTGCGATGTGTTATCGCTATGGATTGGCA
GTTCCACTGTGGTGGGGATCGGGTCTTTGTTTTCAGATCGCCTTGATGGC
TGCTCTTGGTGTCATGGCCAAGATCCGGGTTCCGTATGCCCATACGTCGC
TTGAGATCACTCGTATGCGATATGGCTGGATCGGACATGTCATCTACATG
GTTTTGAATCTGACAAACAACGTTTTTGGTTGTGCCTCGATGATCTTGAC
CGGCTCCCAGCTGATAAACGGTGTTTCGGGCATGAACTTCGTTGCGGCAA
CCATCCTGATTCCTTTGGGAGTTGTTCTTTACACGGCTGTTGGAGGGCTG
AAAGCGACGTTTTTGACCGACTTTTTGCATACCACAGTCGCCTTAATCCT
GATCATTTATTTCACACTCTCAGTCCTTACTCACCCCGAAGTTGGCGGGT
TGGCTGGACTATACGACAAGGTGGTCGCAACAGCGAGCGAGAATTATATC
TCCGGTAACTTCGAGGGATCGCTTCTCACGATGAAATCAAAAGGGGCGAT
TATTTGGGGCTTAATCTTGAAGTTTGGTAACTTAGCTCTGGTGGTCATGG
ACACCGCGTTCTGGCAAAAGTCTTTTGCCAGTGAAGTGAATTCTACCGTG
CCGGCATACAACCTGGCCGCAATAGCTGTGTTTGGTATCCCCTGGGGCTT
AGGCACTGTTATTGGCCTGACCGCTCGAGCGCTCCACCACACTCCTCTCT
GGCCCACCTATCCTATTGATATCACGACAACTGAGGTCAGCAAAGGCATG
GTCATGCCCTACCTGGTCAAGGCCCTTCTTGGAGAGTCTGGAATGATCGC
CTTCTTTGTTCTCTTGTTCATGGCACTGACCAGCACGGTCTCCTCGTCAA
TGATCGCCGTCAGCAGTATCCTGTCGTTTGATATGTACAAGACGTACATC
AACCCCCAAGCCAGTGATCGCCGGCTCTTGGGAGTTAGCCACATAACTGT
CGTATTCCATGCGATCTTCATCACTGGCATTTCCATTGCTCTTAACTACG
GGGGCGCCAACATGACGTGGATCGGTTACTTCCGGCCTATCCTGTCTTGT
CCCGGAATCATTCCTCTCGGGTTGACTCTGTTCTGGTCCCGTCAGACCCG
CCTGGCGGCTATCCTATCGCCGGTGCTTGGCTTCTTTACTGGTCTTGCGA
TCTGGCTCGCAACGGCCAAGTCAATGTATGGGGCCGTGAACATGACCACA
ACTGGAGAAGAGCTGCCCGCACTCTATGGTGCCATCGGGTCTTTCTTCTC
ACCCGCTCTCTACTCCGTGGTAATTTCTCTATATCGCCCGTACACATTTG
ACTGGCGAGAGTTCCTCAGAATCGAACTCGCAGATGAAGCACCGACTAGA
GCCACGCCCGCTGCAACTCAAGAGACTAAGGTTGAAGGGGTCTATATCTC
GACGGATGCCAGCCCGACGTCAACCCCGAGCCGCCTCAGTCTAGATGACG
TTCGTCACCCTTTCACAGAAGATACCCTGCGAAAGCTGCATCGATGGTCA
TGGATCGCATGGGCGATGTTTGTGGTCTTGGTGCTGATTACCTTTGTGCT
GTGGCCAATGCCGCTTTATCGCGACTATATCTTCACCAAATCCTTCTTCT
CCGGATGGACCACGGTCGCGATCATCTGGCAATTCTGTGCCTTTTTCGCT
GTTGTGGTCTACCCACTGTATGACGGACGGTTCGAAATTGCTAAGGGTGT
ACAAGGCGTACTGACGTCAAGTCGTGAATTCCTCAACCGACACAAAAATT
AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003359-T1.utr5p1 | KJC3_003359-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.4 |
| DBxref | InterPro:IPR038377 |
| DBxref | InterPro:IPR001734 |
| DBxref | PFAM:PF00474 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1722639..1724885 + |
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