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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1763320..1764719+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003373-T1 ID=KJC3_003373-T1|Name=KJC3_003373-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1400bp|location=Sequence derived from alignment at ch3:1763320..1764719+ (Aspergillus niger KJC3)
CTACAATACCCCCATGAAAGCTCTTCATCTTGCACACCTTCGATGCTCCC
TTCTACCTTAAAGTCATCGCGCTATGGGCGCTTTGTTATCTTGACGATCC
CGCTGCTCGTGTTCAGCTGCCTGCTCTTCCTGACGTGGGACCCACTGCCC
GGCCGACTCGCTCGTCAGCAATCGACGTCACAGTCCGATCCGCTATCCCA
GGTACCACAAGCAGTTGAGCCACCAAAGGAAGAACCATCGCAACCCAAAA
CTCCTGTATCTACCAGCAAACCATCCAGCTCAAAACCGACTGCTGACATT
GCTGGTGGTGATGCTATCTTCGGTATAACTGACAAGCTTTGGCAATCCGC
CAAGGATCCCCACCTGAGCGATGACCAAGACGAATGGATCAGCAGCTGGC
TTGTGAAGAACCCCTCTTTCCGATATGAGCTCCTGACTGATACCTCCGCT
GCCACGTTTGTCCGTACTCATTATGCCTCGCGACCCGACATTATCGAGGT
GTTCGAAACCCTCCCGATCCCGATCCTGCGGGCGGATCTTCTGCGATACC
TGCTCGTGCTTGCGGAGGGGGGCGTCTGGAGTGATCTCGACGTCACCTGC
GATAAGCCCGTGGCCGACTGGGTCCCCACGGAATACAAGAATGCAAAGAT
CGAGATGATCGTGGGACTGGAGTTTGATTTTGAATGGCGCGGAGAAGGAA
CGGAGATCGCATCGCAGTTCTGCAACTGGGTCTTTGCGGCACCCCGCTCA
TCACGAGTTCTTCAGGTGGTGGTAGACGCCGTAGTGGACAAACTGAAAGA
GATCGCCGCGATGAATAACGTGCAGGTAAAAGACCTGACGTTAGAAATGC
TGCCTATTGATGTTGTCAATGTGACGGGGCCCAAGATCATGACAATGGCA
ATCTTGGACAGCCTGAAGCAGCTCCTAGGTCGGACGGTTGATGATCGCGA
CTTCCATGGAATCAAGAAGCCCAAGCTCATCGGTGATGTCCTTATCATGC
CTGGTGTGGCGTTTGCGGCATCCCAGAATGGATATCCCCAGGATCAAGGA
GATGCGCTGGTTACGCATCACTACGCGGGCTCGTGGAAGCAGGCAGATGC
GGAGGCGAAGGAGAAGAAAAAGCAGAAACAGAACGGGCGGGATAAAGTCG
TATAGAGTATCATGGGCATTGGATTGTTAGGATTTGTGTTCTGGGATTGG
CGTTGGTTGCGCGTTTAGCATTTTGTACAGTGGCGTACTCATAATTCACC
TTTATCTGATGGCGGCTCATTCTGCTCCTTTTTTCCGTTGGTAATTTCGC
TCAGCAAAGAGAGCAAGACGCCTATTTGCTGATCTTGGTCTCATGAATCC
CACATGGTGTTGTATATTTGAAGTTGTGCCATTTCGGTTTTCCACCGGTG
back to topCoding sequence (CDS) from alignment at ch3:1763320..1764719+ >KJC3_003373-T1 ID=KJC3_003373-T1|Name=KJC3_003373-T1|organism=Aspergillus niger KJC3|type=CDS|length=1113bp|location=Sequence derived from alignment at ch3:1763320..1764719+ (Aspergillus niger KJC3)
ATGCTCCCTTCTACCTTAAAGTCATCGCGCTATGGGCGCTTTGTTATCTT
GACGATCCCGCTGCTCGTGTTCAGCTGCCTGCTCTTCCTGACGTGGGACC
CACTGCCCGGCCGACTCGCTCGTCAGCAATCGACGTCACAGTCCGATCCG
CTATCCCAGGTACCACAAGCAGTTGAGCCACCAAAGGAAGAACCATCGCA
ACCCAAAACTCCTGTATCTACCAGCAAACCATCCAGCTCAAAACCGACTG
CTGACATTGCTGGTGGTGATGCTATCTTCGGTATAACTGACAAGCTTTGG
CAATCCGCCAAGGATCCCCACCTGAGCGATGACCAAGACGAATGGATCAG
CAGCTGGCTTGTGAAGAACCCCTCTTTCCGATATGAGCTCCTGACTGATA
CCTCCGCTGCCACGTTTGTCCGTACTCATTATGCCTCGCGACCCGACATT
ATCGAGGTGTTCGAAACCCTCCCGATCCCGATCCTGCGGGCGGATCTTCT
GCGATACCTGCTCGTGCTTGCGGAGGGGGGCGTCTGGAGTGATCTCGACG
TCACCTGCGATAAGCCCGTGGCCGACTGGGTCCCCACGGAATACAAGAAT
GCAAAGATCGAGATGATCGTGGGACTGGAGTTTGATTTTGAATGGCGCGG
AGAAGGAACGGAGATCGCATCGCAGTTCTGCAACTGGGTCTTTGCGGCAC
CCCGCTCATCACGAGTTCTTCAGGTGGTGGTAGACGCCGTAGTGGACAAA
CTGAAAGAGATCGCCGCGATGAATAACGTGCAGGTAAAAGACCTGACGTT
AGAAATGCTGCCTATTGATGTTGTCAATGTGACGGGGCCCAAGATCATGA
CAATGGCAATCTTGGACAGCCTGAAGCAGCTCCTAGGTCGGACGGTTGAT
GATCGCGACTTCCATGGAATCAAGAAGCCCAAGCTCATCGGTGATGTCCT
TATCATGCCTGGTGTGGCGTTTGCGGCATCCCAGAATGGATATCCCCAGG
ATCAAGGAGATGCGCTGGTTACGCATCACTACGCGGGCTCGTGGAAGCAG
GCAGATGCGGAGGCGAAGGAGAAGAAAAAGCAGAAACAGAACGGGCGGGA
TAAAGTCGTATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003373-T1.utr5p1 | KJC3_003373-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003373-T1.utr3p1 | KJC3_003373-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.5 |
| Note | CAZy:GT32 |
| DBxref | InterPro:IPR029044 |
| DBxref | InterPro:IPR007577 |
| DBxref | PFAM:PF04488 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1763320..1764719 + |
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