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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1771611..1772864- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003377-T1 ID=KJC3_003377-T1|Name=KJC3_003377-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1254bp|location=Sequence derived from alignment at ch3:1771611..1772864- (Aspergillus niger KJC3)
ATGCCAGACACACAGCGCATCACCGGACGCGCCCTTGTTTCCCACGGCCC
CTACCAGGCTGGTGGCTGGAAGCTTCAAAATGTCTCCCTGAGACCCTTGC
GAGAGAATGAGCTACTTATTGAAGTGGTTGCCTCAGGTGTCTGCCAGACC
GATCTCCATTTTGCTGGGTTGGAACGTGGTCATGGCGTACATTATCCCCG
GGTGATGGGACACGAAGGTAATTACTCCATTCCTGTGGTGCTGTCATGTC
TGTAAGAGAAGCTGATTATCTCATGAATCATCCATTCTTCGATAGGCGCC
GGATATGTTCGACAGGTCGGGCCCAGCGTCAGCGCAGCCCGAGTCGGCGA
CCCAGTCCTCCTGTCATTCTCGGCATGCCAGACCTGCCAATGCTGCAGTC
GGGGTCATCCCGCACACTGTCACAATTTCGATCCTATTAATTTCGAGTCA
AGCAAAGCCAACCGCGTTTTCTGGGGAACTGAAGCCGACGTATCAACACA
CTCTGCGGAGCCGGAAATCTTCGGCCAATTCTTCGGGCAATCGAGCTTTG
CTAGCTGGACAATAGTGCAGGAGGAATCAGTGGTGAATGTCTCCGGGCTG
GTGGAGGGAAGGGGGGACCTTCATCTGCTGGCGCCGCTGGGGTGTGGCGT
CCAGACAGGTGCAGGAGCGGTTATCAAGGCAGCCAAGGCACAGCCTGAGG
ATACTGTAGCTGTGCTCGGGCTGGGAGGCGTTGGATTGAGTGCGGTGATG
GGAGCGCGTATTGCCGGTTGCAGGAAAATCATCGGGATTGCACGAAATCA
GGCTCGTCTTGAGCTGGCACTGGCGCTTGGAGCGACACATGTCGTTAGAC
TCGATTCAAATACAGATAAAGGTCATGTAACAGAGTTGGTTCGTGCTCTT
ACTAATGGCCTTGGTGCAGATGTTACGCTGGAGACTACGGGGGTACCGGG
GTTGATTGCCGAGGGCATTCGCATGACAGCTAACAAGGGAAGGATTGTTC
AGCTTGGAACAGCTCCAGAAGATGCGGAGGTCAGTCTTCCAATTCATGAC
TTTATGGTTGCTGGGAAGCAATACATGGGAGTTGTGGAGGGAGACGTTGT
TCCTCGGGAGTTTGTGCCTAAAATGATTGAATGGGTGAAGACGGGACTAC
TACCTTTGCATGAGATTGTGGGCTTTTATCAAGCGGAAGATTACAGGACG
GCCATAAACGACATGAAAAGTGGGAAGACCATTAAACCTATACTGTTATG
GTGA back to topCoding sequence (CDS) from alignment at ch3:1771611..1772864- >KJC3_003377-T1 ID=KJC3_003377-T1|Name=KJC3_003377-T1|organism=Aspergillus niger KJC3|type=CDS|length=2352bp|location=Sequence derived from alignment at ch3:1771611..1772864- (Aspergillus niger KJC3)
GCGCCGGATATGTTCGACAGGTCGGGCCCAGCGTCAGCGCAGCCCGAGTC
GGCGACCCAGTCCTCCTGTCATTCTCGGCATGCCAGACCTGCCAATGCTG
CAGTCGGGGTCATCCCGCACACTGTCACAATTTCGATCCTATTAATTTCG
AGTCAAGCAAAGCCAACCGCGTTTTCTGGGGAACTGAAGCCGACGTATCA
ACACACTCTGCGGAGCCGGAAATCTTCGGCCAATTCTTCGGGCAATCGAG
CTTTGCTAGCTGGACAATAGTGCAGGAGGAATCAGTGGTGAATGTCTCCG
GGCTGGTGGAGGGAAGGGGGGACCTTCATCTGCTGGCGCCGCTGGGGTGT
GGCGTCCAGACAGGTGCAGGAGCGGTTATCAAGGCAGCCAAGGCACAGCC
TGAGGATACTGTAGCTGTGCTCGGGCTGGGAGGCGTTGGATTGAGTGCGG
TGATGGGAGCGCGTATTGCCGGTTGCAGGAAAATCATCGGGATTGCACGA
AATCAGGCTCGTCTTGAGCTGGCACTGGCGCTTGGAGCGACACATGTCGT
TAGACTCGATTCAAATACAGATAAAGGTCATGTAACAGAGTTGGTTCGTG
CTCTTACTAATGGCCTTGGTGCAGATGTTACGCTGGAGACTACGGGGGTA
CCGGGGTTGATTGCCGAGGGCATTCGCATGACAGCTAACAAGGGAAGGAT
TGTTCAGCTTGGAACAGCTCCAGAAGATGCGGAGGTCAGTCTTCCAATTC
ATGACTTTATGGTTGCTGGGAAGCAATACATGGGAGTTGTGGAGGGAGAC
GTTGTTCCTCGGGAGTTTGTGCCTAAAATGATTGAATGGGTGAAGACGGG
ACTACTACCTTTGCATGAGATTGTGGGCTTTTATCAAGCGGAAGATTACA
GGACGGCCATAAACGACATGAAAAGTGGGAAGACCATTAAACCTATACTG
TTATGGTGAATGCCAGACACACAGCGCATCACCGGACGCGCCCTTGTTTC
CCACGGCCCCTACCAGGCTGGTGGCTGGAAGCTTCAAAATGTCTCCCTGA
GACCCTTGCGAGAGAATGAGCTACTTATTGAAGTGGTTGCCTCAGGTGTC
TGCCAGACCGATCTCCATTTTGCTGGGTTGGAACGTGGTCATGGCGTACA
TTATCCCCGGGTGATGGGACACGAAGGCGCCGGATATGTTCGACAGGTCG
GGCCCAGCGTCAGCGCAGCCCGAGTCGGCGACCCAGTCCTCCTGTCATTC
TCGGCATGCCAGACCTGCCAATGCTGCAGTCGGGGTCATCCCGCACACTG
TCACAATTTCGATCCTATTAATTTCGAGTCAAGCAAAGCCAACCGCGTTT
TCTGGGGAACTGAAGCCGACGTATCAACACACTCTGCGGAGCCGGAAATC
TTCGGCCAATTCTTCGGGCAATCGAGCTTTGCTAGCTGGACAATAGTGCA
GGAGGAATCAGTGGTGAATGTCTCCGGGCTGGTGGAGGGAAGGGGGGACC
TTCATCTGCTGGCGCCGCTGGGGTGTGGCGTCCAGACAGGTGCAGGAGCG
GTTATCAAGGCAGCCAAGGCACAGCCTGAGGATACTGTAGCTGTGCTCGG
GCTGGGAGGCGTTGGATTGAGTGCGGTGATGGGAGCGCGTATTGCCGGTT
GCAGGAAAATCATCGGGATTGCACGAAATCAGGCTCGTCTTGAGCTGGCA
CTGGCGCTTGGAGCGACACATGTCGTTAGACTCGATTCAAATACAGATAA
AGGTCATGTAACAGAGTTGGTTCGTGCTCTTACTAATGGCCTTGGTGCAG
ATGTTACGCTGGAGACTACGGGGGTACCGGGGTTGATTGCCGAGGGCATT
CGCATGACAGCTAACAAGGGAAGGATTGTTCAGCTTGGAACAGCTCCAGA
AGATGCGGAGGTCAGTCTTCCAATTCATGACTTTATGGTTGCTGGGAAGC
AATACATGGGAGTTGTGGAGGGAGACGTTGTTCCTCGGGAGTTTGTGCCT
AAAATGATTGAATGGGTGAAGACGGGACTACTACCTTTGCATGAGATTGT
GGGCTTTTATCAAGCGGAAGATTACAGGACGGCCATAAACGACATGAAAA
GTGGGAAGACCATTAAACCTATACTGTTATGGTGAATGCCAGACACACAG
CGCATCACCGGACGCGCCCTTGTTTCCCACGGCCCCTACCAGGCTGGTGG
CTGGAAGCTTCAAAATGTCTCCCTGAGACCCTTGCGAGAGAATGAGCTAC
TTATTGAAGTGGTTGCCTCAGGTGTCTGCCAGACCGATCTCCATTTTGCT
GGGTTGGAACGTGGTCATGGCGTACATTATCCCCGGGTGATGGGACACGA
AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.5 |
| Note | SMCOG1040:alcohol dehydrogenase |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR011032 |
| DBxref | InterPro:IPR002328 |
| DBxref | InterPro:IPR013154 |
| DBxref | InterPro:IPR013149 |
| DBxref | InterPro:IPR020843 |
| DBxref | PFAM:PF00107 |
| DBxref | PFAM:PF08240 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1771611..1772864 - |
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