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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1775244..1777096- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003379-T1 ID=KJC3_003379-T1|Name=KJC3_003379-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1853bp|location=Sequence derived from alignment at ch3:1775244..1777096- (Aspergillus niger KJC3) AATAGACTCACATCTCTTCCCCCTTTATAATTACTCTTGATCGATTTATG
CTATGTCTCAAGCCCCGACACTGAAGACGCTTCCCACTCTAGCTAACGAG
GACAATAACAGAGAGGAGGAACTGATCTCGGAGCAAAGTCCTTCCGAGCA
TGAAGCTCTCCTGCCGAATAGTCAGAGGCAAGGACCTCCAAACGCCCCCG
TGGTGATATTCTGCATCTCCTGTATAACTTTCATTGGCTCTTATCTGGGT
GGGCTAGTGACCGTGTCTGTTCCGCAAATTTCCTCAGATCTTCACCTGAG
TCCCGGAGTGGAATTATGGTGTGTTATAAATCTTTATCTTAATGTCTCAT
AGAACAGAATTAACACGCAGGAATACTAGGCCAGTGTCGATGTTCGCCCT
AGGAACAGGGTGCACACTGCTCATTTCGGGTGCCATCTCCGATGCGGTAG
GCAGCAAAGCAACTCTGATCGCGGGTTGTTTTCTGCAAAGTGCTTTCTCA
ATGGCCTGTGGCCTTGCTCGAAACGGGATTCAACTCATAATCTTTAGAAT
CATGTCTGGTGTAGCAGCTTCACTTTGTATGCCGTCTGCTATGAGTATCA
TTGCCGAACACTTTCCATCTGGAAAGCTCAGAAATCTTGCCTTTGCTCTG
ATGGGATCGGGTCAACCCATCGGCTTTGGTGTCGGTCTCCTTCTGGGAGG
CGTTTTTGCGGACACTGTGAGCTGGCGCTGGGGCTTTTACAGCGCCGCGA
TCGCCAATACTCCGGTCTTCCTTCTATCAATATGGCAATTGCCCGGTAGA
AACTCCGGACAACAGGGTATTTCATGGCGTAATCTCTTCTTTGGAATTGA
CTGGATTGGAGCCCTGACTGCCAGTGCCGCGCTGGCTCTTCTCTCCTATG
CTATAGCGTGCGTATATAAGACCTAGTTCGAGTTGAGCTGAAAGATCACT
GACTTGCTTTTCTCTCCGTGTTAGTGTCATCACCGATGATGTATCAGAGA
TCCACGAATCAAGCACGATTATATTCCTCTCCCTGTCCTGCGCCCTGATG
GTCTTCTTTGTCCTCTGGCAAGGCCAACAAGAGCATCAGTCCCGACCCAC
CCTAATTAAGAACTCCTTGTGGAAGGACTCGGGCTTTACCTGCATTTGCA
CCAACGTCTTCCTGATCTGGGGTGAATTCAATGCTTTTGAGCAAATCGCC
AACTTCTTCTTCCAGGACGTGCAGCAGCTCTCGGTATTCAGTACTTCTGT
GCGCTTTGTTCCAGTAACTGTCATGGGCGTACTCACCAGCCTGGTCACTG
GGATGATATTGCACCGAGTGCGCGCAGATGCCCTGATCAACTGGGCTACT
ATCCTCTCATCGCTCTCACCACTACTAATGGCGCTTATTGACCCAGCGTG
GACGTATTGGCGCAGTGCGTTCATTGCCATGTGCCTTAACCCCGTTGCGG
CTGATGTCCTCTTCACTGTTTCGACCATAATTATTGCTGGCATGTTCCCT
GCGGAGACGCAGGGTCTGGCTGCCGGCGTATTCAACACTGTGTCGCAGTT
CGGGCGAAGCATTGGATTGGCGTTGGTGGCGTTGATCGCGAATAGTGTTA
CTGATAGGTACTCGCAATCAGAGAACAAGGATAGTCCCGAGGCATTGATG
GTGGGCTATCGGGCAGCTTTTTGGTTCCTTTTTGCGATGAATATTGCCAG
TCTTGTGGCGAGTTTAATCGGGTTGCGGAGGATTGGGAATGTGGGACGGA
AAAGGTCTCTGGAAATCTGAGTCTTGGTGAACTTCATGTTTGAGACTGCT
TATAGATTCATTCCGATAGATAGAACATATATAAGACAGTTAGTATTGGT
TAG back to topCoding sequence (CDS) from alignment at ch3:1775244..1777096- >KJC3_003379-T1 ID=KJC3_003379-T1|Name=KJC3_003379-T1|organism=Aspergillus niger KJC3|type=CDS|length=4770bp|location=Sequence derived from alignment at ch3:1775244..1777096- (Aspergillus niger KJC3) TGTCATCACCGATGATGTATCAGAGATCCACGAATCAAGCACGATTATAT TCCTCTCCCTGTCCTGCGCCCTGATGGTCTTCTTTGTCCTCTGGCAAGGC CAACAAGAGCATCAGTCCCGACCCACCCTAATTAAGAACTCCTTGTGGAA GGACTCGGGCTTTACCTGCATTTGCACCAACGTCTTCCTGATCTGGGGTG AATTCAATGCTTTTGAGCAAATCGCCAACTTCTTCTTCCAGGACGTGCAG CAGCTCTCGGTATTCAGTACTTCTGTGCGCTTTGTTCCAGTAACTGTCAT GGGCGTACTCACCAGCCTGGTCACTGGGATGATATTGCACCGAGTGCGCG CAGATGCCCTGATCAACTGGGCTACTATCCTCTCATCGCTCTCACCACTA CTAATGGCGCTTATTGACCCAGCGTGGACGTATTGGCGCAGTGCGTTCAT TGCCATGTGCCTTAACCCCGTTGCGGCTGATGTCCTCTTCACTGTTTCGA CCATAATTATTGCTGGCATGTTCCCTGCGGAGACGCAGGGTCTGGCTGCC GGCGTATTCAACACTGTGTCGCAGTTCGGGCGAAGCATTGGATTGGCGTT GGTGGCGTTGATCGCGAATAGTGTTACTGATAGGTACTCGCAATCAGAGA ACAAGGATAGTCCCGAGGCATTGATGGTGGGCTATCGGGCAGCTTTTTGG TTCCTTTTTGCGATGAATATTGCCAGTCTTGTGGCGAGTTTAATCGGGTT GCGGAGGATTGGGAATGTGGGACGGAAAAGGTCTCTGGAAATCTGAGCCA GTGTCGATGTTCGCCCTAGGAACAGGGTGCACACTGCTCATTTCGGGTGC CATCTCCGATGCGGTAGGCAGCAAAGCAACTCTGATCGCGGGTTGTTTTC TGCAAAGTGCTTTCTCAATGGCCTGTGGCCTTGCTCGAAACGGGATTCAA CTCATAATCTTTAGAATCATGTCTGGTGTAGCAGCTTCACTTTGTATGCC GTCTGCTATGAGTATCATTGCCGAACACTTTCCATCTGGAAAGCTCAGAA ATCTTGCCTTTGCTCTGATGGGATCGGGTCAACCCATCGGCTTTGGTGTC GGTCTCCTTCTGGGAGGCGTTTTTGCGGACACTGTGAGCTGGCGCTGGGG CTTTTACAGCGCCGCGATCGCCAATACTCCGGTCTTCCTTCTATCAATAT GGCAATTGCCCGGTAGAAACTCCGGACAACAGGGTATTTCATGGCGTAAT CTCTTCTTTGGAATTGACTGGATTGGAGCCCTGACTGCCAGTGCCGCGCT GGCTCTTCTCTCCTATGCTATAGCATGTCTCAAGCCCCGACACTGAAGAC GCTTCCCACTCTAGCTAACGAGGACAATAACAGAGAGGAGGAACTGATCT CGGAGCAAAGTCCTTCCGAGCATGAAGCTCTCCTGCCGAATAGTCAGAGG CAAGGACCTCCAAACGCCCCCGTGGTGATATTCTGCATCTCCTGTATAAC TTTCATTGGCTCTTATCTGGGTGGGCTAGTGACCGTGTCTGTTCCGCAAA TTTCCTCAGATCTTCACCTGAGTCCCGGAGTGGAATTATGTGTCATCACC GATGATGTATCAGAGATCCACGAATCAAGCACGATTATATTCCTCTCCCT GTCCTGCGCCCTGATGGTCTTCTTTGTCCTCTGGCAAGGCCAACAAGAGC ATCAGTCCCGACCCACCCTAATTAAGAACTCCTTGTGGAAGGACTCGGGC TTTACCTGCATTTGCACCAACGTCTTCCTGATCTGGGGTGAATTCAATGC TTTTGAGCAAATCGCCAACTTCTTCTTCCAGGACGTGCAGCAGCTCTCGG TATTCAGTACTTCTGTGCGCTTTGTTCCAGTAACTGTCATGGGCGTACTC ACCAGCCTGGTCACTGGGATGATATTGCACCGAGTGCGCGCAGATGCCCT GATCAACTGGGCTACTATCCTCTCATCGCTCTCACCACTACTAATGGCGC TTATTGACCCAGCGTGGACGTATTGGCGCAGTGCGTTCATTGCCATGTGC CTTAACCCCGTTGCGGCTGATGTCCTCTTCACTGTTTCGACCATAATTAT TGCTGGCATGTTCCCTGCGGAGACGCAGGGTCTGGCTGCCGGCGTATTCA ACACTGTGTCGCAGTTCGGGCGAAGCATTGGATTGGCGTTGGTGGCGTTG ATCGCGAATAGTGTTACTGATAGGTACTCGCAATCAGAGAACAAGGATAG TCCCGAGGCATTGATGGTGGGCTATCGGGCAGCTTTTTGGTTCCTTTTTG CGATGAATATTGCCAGTCTTGTGGCGAGTTTAATCGGGTTGCGGAGGATT GGGAATGTGGGACGGAAAAGGTCTCTGGAAATCTGAGCCAGTGTCGATGT TCGCCCTAGGAACAGGGTGCACACTGCTCATTTCGGGTGCCATCTCCGAT GCGGTAGGCAGCAAAGCAACTCTGATCGCGGGTTGTTTTCTGCAAAGTGC TTTCTCAATGGCCTGTGGCCTTGCTCGAAACGGGATTCAACTCATAATCT TTAGAATCATGTCTGGTGTAGCAGCTTCACTTTGTATGCCGTCTGCTATG AGTATCATTGCCGAACACTTTCCATCTGGAAAGCTCAGAAATCTTGCCTT TGCTCTGATGGGATCGGGTCAACCCATCGGCTTTGGTGTCGGTCTCCTTC TGGGAGGCGTTTTTGCGGACACTGTGAGCTGGCGCTGGGGCTTTTACAGC GCCGCGATCGCCAATACTCCGGTCTTCCTTCTATCAATATGGCAATTGCC CGGTAGAAACTCCGGACAACAGGGTATTTCATGGCGTAATCTCTTCTTTG GAATTGACTGGATTGGAGCCCTGACTGCCAGTGCCGCGCTGGCTCTTCTC TCCTATGCTATAGCATGTCTCAAGCCCCGACACTGAAGACGCTTCCCACT CTAGCTAACGAGGACAATAACAGAGAGGAGGAACTGATCTCGGAGCAAAG TCCTTCCGAGCATGAAGCTCTCCTGCCGAATAGTCAGAGGCAAGGACCTC CAAACGCCCCCGTGGTGATATTCTGCATCTCCTGTATAACTTTCATTGGC TCTTATCTGGGTGGGCTAGTGACCGTGTCTGTTCCGCAAATTTCCTCAGA TCTTCACCTGAGTCCCGGAGTGGAATTATGTGTCATCACCGATGATGTAT CAGAGATCCACGAATCAAGCACGATTATATTCCTCTCCCTGTCCTGCGCC CTGATGGTCTTCTTTGTCCTCTGGCAAGGCCAACAAGAGCATCAGTCCCG ACCCACCCTAATTAAGAACTCCTTGTGGAAGGACTCGGGCTTTACCTGCA TTTGCACCAACGTCTTCCTGATCTGGGGTGAATTCAATGCTTTTGAGCAA ATCGCCAACTTCTTCTTCCAGGACGTGCAGCAGCTCTCGGTATTCAGTAC TTCTGTGCGCTTTGTTCCAGTAACTGTCATGGGCGTACTCACCAGCCTGG TCACTGGGATGATATTGCACCGAGTGCGCGCAGATGCCCTGATCAACTGG GCTACTATCCTCTCATCGCTCTCACCACTACTAATGGCGCTTATTGACCC AGCGTGGACGTATTGGCGCAGTGCGTTCATTGCCATGTGCCTTAACCCCG TTGCGGCTGATGTCCTCTTCACTGTTTCGACCATAATTATTGCTGGCATG TTCCCTGCGGAGACGCAGGGTCTGGCTGCCGGCGTATTCAACACTGTGTC GCAGTTCGGGCGAAGCATTGGATTGGCGTTGGTGGCGTTGATCGCGAATA GTGTTACTGATAGGTACTCGCAATCAGAGAACAAGGATAGTCCCGAGGCA TTGATGGTGGGCTATCGGGCAGCTTTTTGGTTCCTTTTTGCGATGAATAT TGCCAGTCTTGTGGCGAGTTTAATCGGGTTGCGGAGGATTGGGAATGTGG GACGGAAAAGGTCTCTGGAAATCTGAGCCAGTGTCGATGTTCGCCCTAGG AACAGGGTGCACACTGCTCATTTCGGGTGCCATCTCCGATGCGGTAGGCA GCAAAGCAACTCTGATCGCGGGTTGTTTTCTGCAAAGTGCTTTCTCAATG GCCTGTGGCCTTGCTCGAAACGGGATTCAACTCATAATCTTTAGAATCAT GTCTGGTGTAGCAGCTTCACTTTGTATGCCGTCTGCTATGAGTATCATTG CCGAACACTTTCCATCTGGAAAGCTCAGAAATCTTGCCTTTGCTCTGATG GGATCGGGTCAACCCATCGGCTTTGGTGTCGGTCTCCTTCTGGGAGGCGT TTTTGCGGACACTGTGAGCTGGCGCTGGGGCTTTTACAGCGCCGCGATCG CCAATACTCCGGTCTTCCTTCTATCAATATGGCAATTGCCCGGTAGAAAC TCCGGACAACAGGGTATTTCATGGCGTAATCTCTTCTTTGGAATTGACTG GATTGGAGCCCTGACTGCCAGTGCCGCGCTGGCTCTTCTCTCCTATGCTA TAGCATGTCTCAAGCCCCGACACTGAAGACGCTTCCCACTCTAGCTAACG AGGACAATAACAGAGAGGAGGAACTGATCTCGGAGCAAAGTCCTTCCGAG CATGAAGCTCTCCTGCCGAATAGTCAGAGGCAAGGACCTCCAAACGCCCC CGTGGTGATATTCTGCATCTCCTGTATAACTTTCATTGGCTCTTATCTGG GTGGGCTAGTGACCGTGTCTGTTCCGCAAATTTCCTCAGATCTTCACCTG AGTCCCGGAGTGGAATTATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
Term | Definition |
GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_003379-T1.utr3p1 | KJC3_003379-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_003379-T1.utr5p1 | KJC3_003379-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR036259 |
DBxref | InterPro:IPR020846 |
DBxref | InterPro:IPR011701 |
DBxref | PFAM:PF07690 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch3 | supercontig | ch3:1775244..1777096 - |
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