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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1775244..1777096- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003379-T1 ID=KJC3_003379-T1|Name=KJC3_003379-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1853bp|location=Sequence derived from alignment at ch3:1775244..1777096- (Aspergillus niger KJC3)
AATAGACTCACATCTCTTCCCCCTTTATAATTACTCTTGATCGATTTATG
CTATGTCTCAAGCCCCGACACTGAAGACGCTTCCCACTCTAGCTAACGAG
GACAATAACAGAGAGGAGGAACTGATCTCGGAGCAAAGTCCTTCCGAGCA
TGAAGCTCTCCTGCCGAATAGTCAGAGGCAAGGACCTCCAAACGCCCCCG
TGGTGATATTCTGCATCTCCTGTATAACTTTCATTGGCTCTTATCTGGGT
GGGCTAGTGACCGTGTCTGTTCCGCAAATTTCCTCAGATCTTCACCTGAG
TCCCGGAGTGGAATTATGGTGTGTTATAAATCTTTATCTTAATGTCTCAT
AGAACAGAATTAACACGCAGGAATACTAGGCCAGTGTCGATGTTCGCCCT
AGGAACAGGGTGCACACTGCTCATTTCGGGTGCCATCTCCGATGCGGTAG
GCAGCAAAGCAACTCTGATCGCGGGTTGTTTTCTGCAAAGTGCTTTCTCA
ATGGCCTGTGGCCTTGCTCGAAACGGGATTCAACTCATAATCTTTAGAAT
CATGTCTGGTGTAGCAGCTTCACTTTGTATGCCGTCTGCTATGAGTATCA
TTGCCGAACACTTTCCATCTGGAAAGCTCAGAAATCTTGCCTTTGCTCTG
ATGGGATCGGGTCAACCCATCGGCTTTGGTGTCGGTCTCCTTCTGGGAGG
CGTTTTTGCGGACACTGTGAGCTGGCGCTGGGGCTTTTACAGCGCCGCGA
TCGCCAATACTCCGGTCTTCCTTCTATCAATATGGCAATTGCCCGGTAGA
AACTCCGGACAACAGGGTATTTCATGGCGTAATCTCTTCTTTGGAATTGA
CTGGATTGGAGCCCTGACTGCCAGTGCCGCGCTGGCTCTTCTCTCCTATG
CTATAGCGTGCGTATATAAGACCTAGTTCGAGTTGAGCTGAAAGATCACT
GACTTGCTTTTCTCTCCGTGTTAGTGTCATCACCGATGATGTATCAGAGA
TCCACGAATCAAGCACGATTATATTCCTCTCCCTGTCCTGCGCCCTGATG
GTCTTCTTTGTCCTCTGGCAAGGCCAACAAGAGCATCAGTCCCGACCCAC
CCTAATTAAGAACTCCTTGTGGAAGGACTCGGGCTTTACCTGCATTTGCA
CCAACGTCTTCCTGATCTGGGGTGAATTCAATGCTTTTGAGCAAATCGCC
AACTTCTTCTTCCAGGACGTGCAGCAGCTCTCGGTATTCAGTACTTCTGT
GCGCTTTGTTCCAGTAACTGTCATGGGCGTACTCACCAGCCTGGTCACTG
GGATGATATTGCACCGAGTGCGCGCAGATGCCCTGATCAACTGGGCTACT
ATCCTCTCATCGCTCTCACCACTACTAATGGCGCTTATTGACCCAGCGTG
GACGTATTGGCGCAGTGCGTTCATTGCCATGTGCCTTAACCCCGTTGCGG
CTGATGTCCTCTTCACTGTTTCGACCATAATTATTGCTGGCATGTTCCCT
GCGGAGACGCAGGGTCTGGCTGCCGGCGTATTCAACACTGTGTCGCAGTT
CGGGCGAAGCATTGGATTGGCGTTGGTGGCGTTGATCGCGAATAGTGTTA
CTGATAGGTACTCGCAATCAGAGAACAAGGATAGTCCCGAGGCATTGATG
GTGGGCTATCGGGCAGCTTTTTGGTTCCTTTTTGCGATGAATATTGCCAG
TCTTGTGGCGAGTTTAATCGGGTTGCGGAGGATTGGGAATGTGGGACGGA
AAAGGTCTCTGGAAATCTGAGTCTTGGTGAACTTCATGTTTGAGACTGCT
TATAGATTCATTCCGATAGATAGAACATATATAAGACAGTTAGTATTGGT
TAG back to topCoding sequence (CDS) from alignment at ch3:1775244..1777096- >KJC3_003379-T1 ID=KJC3_003379-T1|Name=KJC3_003379-T1|organism=Aspergillus niger KJC3|type=CDS|length=4770bp|location=Sequence derived from alignment at ch3:1775244..1777096- (Aspergillus niger KJC3)
TGTCATCACCGATGATGTATCAGAGATCCACGAATCAAGCACGATTATAT
TCCTCTCCCTGTCCTGCGCCCTGATGGTCTTCTTTGTCCTCTGGCAAGGC
CAACAAGAGCATCAGTCCCGACCCACCCTAATTAAGAACTCCTTGTGGAA
GGACTCGGGCTTTACCTGCATTTGCACCAACGTCTTCCTGATCTGGGGTG
AATTCAATGCTTTTGAGCAAATCGCCAACTTCTTCTTCCAGGACGTGCAG
CAGCTCTCGGTATTCAGTACTTCTGTGCGCTTTGTTCCAGTAACTGTCAT
GGGCGTACTCACCAGCCTGGTCACTGGGATGATATTGCACCGAGTGCGCG
CAGATGCCCTGATCAACTGGGCTACTATCCTCTCATCGCTCTCACCACTA
CTAATGGCGCTTATTGACCCAGCGTGGACGTATTGGCGCAGTGCGTTCAT
TGCCATGTGCCTTAACCCCGTTGCGGCTGATGTCCTCTTCACTGTTTCGA
CCATAATTATTGCTGGCATGTTCCCTGCGGAGACGCAGGGTCTGGCTGCC
GGCGTATTCAACACTGTGTCGCAGTTCGGGCGAAGCATTGGATTGGCGTT
GGTGGCGTTGATCGCGAATAGTGTTACTGATAGGTACTCGCAATCAGAGA
ACAAGGATAGTCCCGAGGCATTGATGGTGGGCTATCGGGCAGCTTTTTGG
TTCCTTTTTGCGATGAATATTGCCAGTCTTGTGGCGAGTTTAATCGGGTT
GCGGAGGATTGGGAATGTGGGACGGAAAAGGTCTCTGGAAATCTGAGCCA
GTGTCGATGTTCGCCCTAGGAACAGGGTGCACACTGCTCATTTCGGGTGC
CATCTCCGATGCGGTAGGCAGCAAAGCAACTCTGATCGCGGGTTGTTTTC
TGCAAAGTGCTTTCTCAATGGCCTGTGGCCTTGCTCGAAACGGGATTCAA
CTCATAATCTTTAGAATCATGTCTGGTGTAGCAGCTTCACTTTGTATGCC
GTCTGCTATGAGTATCATTGCCGAACACTTTCCATCTGGAAAGCTCAGAA
ATCTTGCCTTTGCTCTGATGGGATCGGGTCAACCCATCGGCTTTGGTGTC
GGTCTCCTTCTGGGAGGCGTTTTTGCGGACACTGTGAGCTGGCGCTGGGG
CTTTTACAGCGCCGCGATCGCCAATACTCCGGTCTTCCTTCTATCAATAT
GGCAATTGCCCGGTAGAAACTCCGGACAACAGGGTATTTCATGGCGTAAT
CTCTTCTTTGGAATTGACTGGATTGGAGCCCTGACTGCCAGTGCCGCGCT
GGCTCTTCTCTCCTATGCTATAGCATGTCTCAAGCCCCGACACTGAAGAC
GCTTCCCACTCTAGCTAACGAGGACAATAACAGAGAGGAGGAACTGATCT
CGGAGCAAAGTCCTTCCGAGCATGAAGCTCTCCTGCCGAATAGTCAGAGG
CAAGGACCTCCAAACGCCCCCGTGGTGATATTCTGCATCTCCTGTATAAC
TTTCATTGGCTCTTATCTGGGTGGGCTAGTGACCGTGTCTGTTCCGCAAA
TTTCCTCAGATCTTCACCTGAGTCCCGGAGTGGAATTATGTGTCATCACC
GATGATGTATCAGAGATCCACGAATCAAGCACGATTATATTCCTCTCCCT
GTCCTGCGCCCTGATGGTCTTCTTTGTCCTCTGGCAAGGCCAACAAGAGC
ATCAGTCCCGACCCACCCTAATTAAGAACTCCTTGTGGAAGGACTCGGGC
TTTACCTGCATTTGCACCAACGTCTTCCTGATCTGGGGTGAATTCAATGC
TTTTGAGCAAATCGCCAACTTCTTCTTCCAGGACGTGCAGCAGCTCTCGG
TATTCAGTACTTCTGTGCGCTTTGTTCCAGTAACTGTCATGGGCGTACTC
ACCAGCCTGGTCACTGGGATGATATTGCACCGAGTGCGCGCAGATGCCCT
GATCAACTGGGCTACTATCCTCTCATCGCTCTCACCACTACTAATGGCGC
TTATTGACCCAGCGTGGACGTATTGGCGCAGTGCGTTCATTGCCATGTGC
CTTAACCCCGTTGCGGCTGATGTCCTCTTCACTGTTTCGACCATAATTAT
TGCTGGCATGTTCCCTGCGGAGACGCAGGGTCTGGCTGCCGGCGTATTCA
ACACTGTGTCGCAGTTCGGGCGAAGCATTGGATTGGCGTTGGTGGCGTTG
ATCGCGAATAGTGTTACTGATAGGTACTCGCAATCAGAGAACAAGGATAG
TCCCGAGGCATTGATGGTGGGCTATCGGGCAGCTTTTTGGTTCCTTTTTG
CGATGAATATTGCCAGTCTTGTGGCGAGTTTAATCGGGTTGCGGAGGATT
GGGAATGTGGGACGGAAAAGGTCTCTGGAAATCTGAGCCAGTGTCGATGT
TCGCCCTAGGAACAGGGTGCACACTGCTCATTTCGGGTGCCATCTCCGAT
GCGGTAGGCAGCAAAGCAACTCTGATCGCGGGTTGTTTTCTGCAAAGTGC
TTTCTCAATGGCCTGTGGCCTTGCTCGAAACGGGATTCAACTCATAATCT
TTAGAATCATGTCTGGTGTAGCAGCTTCACTTTGTATGCCGTCTGCTATG
AGTATCATTGCCGAACACTTTCCATCTGGAAAGCTCAGAAATCTTGCCTT
TGCTCTGATGGGATCGGGTCAACCCATCGGCTTTGGTGTCGGTCTCCTTC
TGGGAGGCGTTTTTGCGGACACTGTGAGCTGGCGCTGGGGCTTTTACAGC
GCCGCGATCGCCAATACTCCGGTCTTCCTTCTATCAATATGGCAATTGCC
CGGTAGAAACTCCGGACAACAGGGTATTTCATGGCGTAATCTCTTCTTTG
GAATTGACTGGATTGGAGCCCTGACTGCCAGTGCCGCGCTGGCTCTTCTC
TCCTATGCTATAGCATGTCTCAAGCCCCGACACTGAAGACGCTTCCCACT
CTAGCTAACGAGGACAATAACAGAGAGGAGGAACTGATCTCGGAGCAAAG
TCCTTCCGAGCATGAAGCTCTCCTGCCGAATAGTCAGAGGCAAGGACCTC
CAAACGCCCCCGTGGTGATATTCTGCATCTCCTGTATAACTTTCATTGGC
TCTTATCTGGGTGGGCTAGTGACCGTGTCTGTTCCGCAAATTTCCTCAGA
TCTTCACCTGAGTCCCGGAGTGGAATTATGTGTCATCACCGATGATGTAT
CAGAGATCCACGAATCAAGCACGATTATATTCCTCTCCCTGTCCTGCGCC
CTGATGGTCTTCTTTGTCCTCTGGCAAGGCCAACAAGAGCATCAGTCCCG
ACCCACCCTAATTAAGAACTCCTTGTGGAAGGACTCGGGCTTTACCTGCA
TTTGCACCAACGTCTTCCTGATCTGGGGTGAATTCAATGCTTTTGAGCAA
ATCGCCAACTTCTTCTTCCAGGACGTGCAGCAGCTCTCGGTATTCAGTAC
TTCTGTGCGCTTTGTTCCAGTAACTGTCATGGGCGTACTCACCAGCCTGG
TCACTGGGATGATATTGCACCGAGTGCGCGCAGATGCCCTGATCAACTGG
GCTACTATCCTCTCATCGCTCTCACCACTACTAATGGCGCTTATTGACCC
AGCGTGGACGTATTGGCGCAGTGCGTTCATTGCCATGTGCCTTAACCCCG
TTGCGGCTGATGTCCTCTTCACTGTTTCGACCATAATTATTGCTGGCATG
TTCCCTGCGGAGACGCAGGGTCTGGCTGCCGGCGTATTCAACACTGTGTC
GCAGTTCGGGCGAAGCATTGGATTGGCGTTGGTGGCGTTGATCGCGAATA
GTGTTACTGATAGGTACTCGCAATCAGAGAACAAGGATAGTCCCGAGGCA
TTGATGGTGGGCTATCGGGCAGCTTTTTGGTTCCTTTTTGCGATGAATAT
TGCCAGTCTTGTGGCGAGTTTAATCGGGTTGCGGAGGATTGGGAATGTGG
GACGGAAAAGGTCTCTGGAAATCTGAGCCAGTGTCGATGTTCGCCCTAGG
AACAGGGTGCACACTGCTCATTTCGGGTGCCATCTCCGATGCGGTAGGCA
GCAAAGCAACTCTGATCGCGGGTTGTTTTCTGCAAAGTGCTTTCTCAATG
GCCTGTGGCCTTGCTCGAAACGGGATTCAACTCATAATCTTTAGAATCAT
GTCTGGTGTAGCAGCTTCACTTTGTATGCCGTCTGCTATGAGTATCATTG
CCGAACACTTTCCATCTGGAAAGCTCAGAAATCTTGCCTTTGCTCTGATG
GGATCGGGTCAACCCATCGGCTTTGGTGTCGGTCTCCTTCTGGGAGGCGT
TTTTGCGGACACTGTGAGCTGGCGCTGGGGCTTTTACAGCGCCGCGATCG
CCAATACTCCGGTCTTCCTTCTATCAATATGGCAATTGCCCGGTAGAAAC
TCCGGACAACAGGGTATTTCATGGCGTAATCTCTTCTTTGGAATTGACTG
GATTGGAGCCCTGACTGCCAGTGCCGCGCTGGCTCTTCTCTCCTATGCTA
TAGCATGTCTCAAGCCCCGACACTGAAGACGCTTCCCACTCTAGCTAACG
AGGACAATAACAGAGAGGAGGAACTGATCTCGGAGCAAAGTCCTTCCGAG
CATGAAGCTCTCCTGCCGAATAGTCAGAGGCAAGGACCTCCAAACGCCCC
CGTGGTGATATTCTGCATCTCCTGTATAACTTTCATTGGCTCTTATCTGG
GTGGGCTAGTGACCGTGTCTGTTCCGCAAATTTCCTCAGATCTTCACCTG
AGTCCCGGAGTGGAATTATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003379-T1.utr3p1 | KJC3_003379-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003379-T1.utr5p1 | KJC3_003379-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1775244..1777096 - |
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