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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1803114..1804594- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003390-T1 ID=KJC3_003390-T1|Name=KJC3_003390-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1481bp|location=Sequence derived from alignment at ch3:1803114..1804594- (Aspergillus niger KJC3)
CCGGTGCCTCAGTTATCAATATTGAAGCACATGAAGCCCACAACTTTTCT
GCCGTCAGTTTGGCTCCAGGAAGTAATGAAGGTGGTCTATATACCATTAG
CTTTTGCAATGTCACGGTCACCCACACCCATCCTGGCTGGAATGACACAG
TCCATACACAAGTCTGGCTCCCACTTGAGGGATGGAATGGCAGGTTTCAA
GCCCTAGGTGGTGGAGGGTACAGCCTCGATCTAGGCACTACCTACATTAC
ATACGCAGTCGCAATGGGGTTTGCATCCGCCTCCACCGATGGAGGTCTAC
CAGCAGGGAATGGGAAGGACAGCAGCATTCCTACAGATCTCTCCTGGGCT
CTCAGTGACGAGAACAACGTGAACTGGCAGCTCCTGGAAAATTACGCGTC
GAAGGCAACAAACGACATGGCTATGATAGGACAGCAGATCATCAAGTCCT
ATTACAACAAATCTGCAAGCTATTCATACTTTGCCGGATGCTCTGGTGGC
GGCCGCCAAGGACTTTTAATGGCACAAAAGTTCCCGGACGTTTTCGATGG
TATCTTAGCAGTTTCGCCAGCCATCAACATGCCAGCCTTCATTCCGGCAG
GCCAATGGGCCTCTCTAGTAATGAGGGAAATTGGGTTCTTTCCGTCACCC
TGTGAGATCAAGGCTTTCACACAGGAAGCCGTGAAAGCGTGTGATCATTT
GGACGGAGTTGAGGATGGAATTATCAGCTACCCAGACAGCTGCCATGTCA
AGGCCGCCGACTTTGTTGGGAAGAATTACACTTGCGACGGAGTCCAAAAA
GCTTTCACTGCTTCTAGCGCGCAGGTAATCCAAGCTGCGTGGTCTGGCTC
TCGCTCTGTCTCTGAGAGGTATGGGTGGTATGGTGTGAATAAGGATGCAT
CAATCGGCGCATCCTATGTCTCTACTGAATGTTCTGCGAACATTACATGC
CACAGTAGTGGAAGTGACTTGTTCGGTAGCTGGCTGAAATATCTTGTTGC
CAAGGACTCAACCTTTTCAAGCAGCAACATGACCCGAAATGAGTTTTTTG
AAGCCCTCCATACTTCAATCGCGGATTACACGTCGATGCTCGCAACGAAT
GACCCTGATCTCTCCAAATTCAAAGCGAACGGTGGTAAAATGATCACCTG
GCACGGACTAGCCGACGAAGTTATCCCACCAAATGGCACTGTCGCATATT
ATGATGAAGTGCTAAAGAACGATCCAAACGCTCATGACTTCTATCGCTTC
TTTGAAGCGCCTGGAGTTGGTCACTGTTACGGTGGGCTCGGTCCTTGTCC
GAACGGCGCCATGTCCCAGCTCATTGAATGGGTGGAGAAGGATCACGCCC
CTAGTGTTCTGCATGCCACCAAAGGCAACAATAATACGGAGAGAGCCCTT
TGTCCCTATCCGCTGCAGCAAAAGTTCATTGGCGGAGACCCCAGAAACGC
AACCTCCTTTACTTGTGCAAAGCGGTATTGA back to topCoding sequence (CDS) from alignment at ch3:1803114..1804594- >KJC3_003390-T1 ID=KJC3_003390-T1|Name=KJC3_003390-T1|organism=Aspergillus niger KJC3|type=CDS|length=1218bp|location=Sequence derived from alignment at ch3:1803114..1804594- (Aspergillus niger KJC3)
ATGGGGTTTGCATCCGCCTCCACCGATGGAGGTCTACCAGCAGGGAATGG
GAAGGACAGCAGCATTCCTACAGATCTCTCCTGGGCTCTCAGTGACGAGA
ACAACGTGAACTGGCAGCTCCTGGAAAATTACGCGTCGAAGGCAACAAAC
GACATGGCTATGATAGGACAGCAGATCATCAAGTCCTATTACAACAAATC
TGCAAGCTATTCATACTTTGCCGGATGCTCTGGTGGCGGCCGCCAAGGAC
TTTTAATGGCACAAAAGTTCCCGGACGTTTTCGATGGTATCTTAGCAGTT
TCGCCAGCCATCAACATGCCAGCCTTCATTCCGGCAGGCCAATGGGCCTC
TCTAGTAATGAGGGAAATTGGGTTCTTTCCGTCACCCTGTGAGATCAAGG
CTTTCACACAGGAAGCCGTGAAAGCGTGTGATCATTTGGACGGAGTTGAG
GATGGAATTATCAGCTACCCAGACAGCTGCCATGTCAAGGCCGCCGACTT
TGTTGGGAAGAATTACACTTGCGACGGAGTCCAAAAAGCTTTCACTGCTT
CTAGCGCGCAGGTAATCCAAGCTGCGTGGTCTGGCTCTCGCTCTGTCTCT
GAGAGGTATGGGTGGTATGGTGTGAATAAGGATGCATCAATCGGCGCATC
CTATGTCTCTACTGAATGTTCTGCGAACATTACATGCCACAGTAGTGGAA
GTGACTTGTTCGGTAGCTGGCTGAAATATCTTGTTGCCAAGGACTCAACC
TTTTCAAGCAGCAACATGACCCGAAATGAGTTTTTTGAAGCCCTCCATAC
TTCAATCGCGGATTACACGTCGATGCTCGCAACGAATGACCCTGATCTCT
CCAAATTCAAAGCGAACGGTGGTAAAATGATCACCTGGCACGGACTAGCC
GACGAAGTTATCCCACCAAATGGCACTGTCGCATATTATGATGAAGTGCT
AAAGAACGATCCAAACGCTCATGACTTCTATCGCTTCTTTGAAGCGCCTG
GAGTTGGTCACTGTTACGGTGGGCTCGGTCCTTGTCCGAACGGCGCCATG
TCCCAGCTCATTGAATGGGTGGAGAAGGATCACGCCCCTAGTGTTCTGCA
TGCCACCAAAGGCAACAATAATACGGAGAGAGCCCTTTGTCCCTATCCGC
TGCAGCAAAAGTTCATTGGCGGAGACCCCAGAAACGCAACCTCCTTTACT
TGTGCAAAGCGGTATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003390-T1.utr5p1 | KJC3_003390-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR011118 |
| DBxref | PFAM:PF07519 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1803114..1804594 - |
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