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KJC3_003396-T3, KJC3_003396-T3 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003396-T3
Unique NameKJC3_003396-T3
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1820038..1821404+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003396-T3 ID=KJC3_003396-T3|Name=KJC3_003396-T3|organism=Aspergillus niger KJC3|type=mRNA|length=1367bp|location=Sequence derived from alignment at ch3:1820038..1821404+ (Aspergillus niger KJC3)
CACAAACGGAGGCAACACTTTAGCCTCATAAAATTGCCTCCTCCACATTA
TCGCAACGGTCCCGAAGAATGGTCACTGTAGGTGCATCGTCATATCACAT
TCGGCAGTTGAACCTTAATTCACAACGCGGAGACCGTCGGAGGTTTCTTC
CTCCGGATGACGCGGTGGCTCCCGCAGGTACATCAATTCGGTCCGATCGG
CGGCAAAGACACTTGGCAGACTGACTGAACTTGCCAGTTCCCCGGAGATA
TTCTATTTTCATATCAAGTTGGTAAGACAACAGGCGGTGAGATATGGGAC
GGCAACGATCTAAACGGGCATCCAGCTCCGATATGCCAGGTACGTGTAGC
ACCTCCACGTCTGCAAATCTGCCGTTTAATGACTGACCCAATCCTAGAGG
ATGATGATGTTCTAAGTCCTATCTCCTGCGAGGTATGCAGGCAGCGGAAA
TGCAAGGTGAGTTAAACTTTCGTTCATCTACTATTTCTGCAGCGTTAATA
CCCACATAGTGCGATCGGAGACTGTATGGCGAACCTATGAAAATGATATT
CCACCTTAAGCGTCGGACTTTGTTGGTCTCTGACATACACCTGTAGCCCT
TTTTGCTCTCAATGCTCCAATGAATCATCAAAATGCAAATACCCTGAAAG
CGGCAAGAGGTATGACCATCTCTCTGCGAGAGACCCGCACTCCACAGCTA
ACCAATATTCAATAGAGGTCTACCTCTCGGATATCTCAATCAATTAGAGC
AAAGACTTGCAGAAACCGAGTCGGCCCTTTATGGTGCTCTCATGGCATTG
AGCTCGATGGGACCAGCAACCACTCTGCTCCAAGCCACTACGAAGCCGGA
TTCGTTACAAAAATCGAAAGCTGCACGAATGGAGGAATGGTCGCGATTGC
CGCTTCGAGATTGGCCTGACATATACCACTGGAAGGCGTCCATGAGCGAT
CAATTTACCCTCAACCAGTTGCAAGGGGAACCGCTCGTGGAAAGTTCTGC
AGTTAGTCATGCCGTTTCAGCTTCGCCTGTGGCAACTACTGCCCACAGCC
ACAGCCCTCAAGGTGAAATAGAAGCCCCGGTACCGGCTAGTTTTGCTTGG
CACCCAGGAGAAGGTGTCCACATGAATAGTCCTTATAACGTCTACCTCCA
ACCCCCTGGAATGGTGTCTTCTCCGGTATACCCAAGAGACCCAGCTTCCG
GGTCAACTGGGGCTATAATTAATCCTTTTCCCGATTATAGTAACGCCACG
GCGACGGGGGATAGTGGGAAACAAAATGATCACTCCACGATGGCGGACGA
GCTGTCTAAAAGCAAGCCGAGTATATACTTTTGATAACGAAGAAATGAAA
TTCAAGACTGTGTGGGG
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Coding sequence (CDS) from alignment at ch3:1820038..1821404+

>KJC3_003396-T3 ID=KJC3_003396-T3|Name=KJC3_003396-T3|organism=Aspergillus niger KJC3|type=CDS|length=4005bp|location=Sequence derived from alignment at ch3:1820038..1821404+ (Aspergillus niger KJC3)
ATGGGACGGCAACGATCTAAACGGGCATCCAGCTCCGATATGCCAGAGGA
TGATGATGTTCTAAGTCCTATCTCCTGCGAGGTATGCAGGCAGCGGAAAT
GCAAGTGCGATCGGAGACTCCCTTTTTGCTCTCAATGCTCCAATGAATCA
TCAAAATGCAAATACCCTGAAAGCGGCAAGAGAGGTCTACCTCTCGGATA
TCTCAATCAATTAGAGCAAAGACTTGCAGAAACCGAGTCGGCCCTTTATG
GTGCTCTCATGGCATTGAGCTCGATGGGACCAGCAACCACTCTGCTCCAA
GCCACTACGAAGCCGGATTCGTTACAAAAATCGAAAGCTGCACGAATGGA
GGAATGGTCGCGATTGCCGCTTCGAGATTGGCCTGACATATACCACTGGA
AGGCGTCCATGAGCGATCAATTTACCCTCAACCAGTTGCAAGGGGAACCG
CTCGTGGAAAGTTCTGCAGTTAGTCATGCCGTTTCAGCTTCGCCTGTGGC
AACTACTGCCCACAGCCACAGCCCTCAAGGTGAAATAGAAGCCCCGGTAC
CGGCTAGTTTTGCTTGGCACCCAGGAGAAGGTGTCCACATGAATAGTCCT
TATAACGTCTACCTCCAACCCCCTGGAATGGTGTCTTCTCCGGTATACCC
AAGAGACCCAGCTTCCGGGTCAACTGGGGCTATAATTAATCCTTTTCCCG
ATTATAGTAACGCCACGGCGACGGGGGATAGTGGGAAACAAAATGATCAC
TCCACGATGGCGGACGAGCTGTCTAAAAGCAAGCCGAGTATATACTTTTG
AATGGGACGGCAACGATCTAAACGGGCATCCAGCTCCGATATGCCAGAGG
ATGATGATGTTCTAAGTCCTATCTCCTGCGAGGTATGCAGGCAGCGGAAA
TGCAAGTGCGATCGGAGACTCCCTTTTTGCTCTCAATGCTCCAATGAATC
ATCAAAATGCAAATACCCTGAAAGCGGCAAGAGAGGTCTACCTCTCGGAT
ATCTCAATCAATTAGAGCAAAGACTTGCAGAAACCGAGTCGGCCCTTTAT
GGTGCTCTCATGGCATTGAGCTCGATGGGACCAGCAACCACTCTGCTCCA
AGCCACTACGAAGCCGGATTCGTTACAAAAATCGAAAGCTGCACGAATGG
AGGAATGGTCGCGATTGCCGCTTCGAGATTGGCCTGACATATACCACTGG
AAGGCGTCCATGAGCGATCAATTTACCCTCAACCAGTTGCAAGGGGAACC
GCTCGTGGAAAGTTCTGCAGTTAGTCATGCCGTTTCAGCTTCGCCTGTGG
CAACTACTGCCCACAGCCACAGCCCTCAAGGTGAAATAGAAGCCCCGGTA
CCGGCTAGTTTTGCTTGGCACCCAGGAGAAGGTGTCCACATGAATAGTCC
TTATAACGTCTACCTCCAACCCCCTGGAATGGTGTCTTCTCCGGTATACC
CAAGAGACCCAGCTTCCGGGTCAACTGGGGCTATAATTAATCCTTTTCCC
GATTATAGTAACGCCACGGCGACGGGGGATAGTGGGAAACAAAATGATCA
CTCCACGATGGCGGACGAGCTGTCTAAAAGCAAGCCGAGTATATACTTTT
GAATGGGACGGCAACGATCTAAACGGGCATCCAGCTCCGATATGCCAGAG
GATGATGATGTTCTAAGTCCTATCTCCTGCGAGGTATGCAGGCAGCGGAA
ATGCAAGTGCGATCGGAGACTCCCTTTTTGCTCTCAATGCTCCAATGAAT
CATCAAAATGCAAATACCCTGAAAGCGGCAAGAGAGGTCTACCTCTCGGA
TATCTCAATCAATTAGAGCAAAGACTTGCAGAAACCGAGTCGGCCCTTTA
TGGTGCTCTCATGGCATTGAGCTCGATGGGACCAGCAACCACTCTGCTCC
AAGCCACTACGAAGCCGGATTCGTTACAAAAATCGAAAGCTGCACGAATG
GAGGAATGGTCGCGATTGCCGCTTCGAGATTGGCCTGACATATACCACTG
GAAGGCGTCCATGAGCGATCAATTTACCCTCAACCAGTTGCAAGGGGAAC
CGCTCGTGGAAAGTTCTGCAGTTAGTCATGCCGTTTCAGCTTCGCCTGTG
GCAACTACTGCCCACAGCCACAGCCCTCAAGGTGAAATAGAAGCCCCGGT
ACCGGCTAGTTTTGCTTGGCACCCAGGAGAAGGTGTCCACATGAATAGTC
CTTATAACGTCTACCTCCAACCCCCTGGAATGGTGTCTTCTCCGGTATAC
CCAAGAGACCCAGCTTCCGGGTCAACTGGGGCTATAATTAATCCTTTTCC
CGATTATAGTAACGCCACGGCGACGGGGGATAGTGGGAAACAAAATGATC
ACTCCACGATGGCGGACGAGCTGTCTAAAAGCAAGCCGAGTATATACTTT
TGAATGGGACGGCAACGATCTAAACGGGCATCCAGCTCCGATATGCCAGA
GGATGATGATGTTCTAAGTCCTATCTCCTGCGAGGTATGCAGGCAGCGGA
AATGCAAGTGCGATCGGAGACTCCCTTTTTGCTCTCAATGCTCCAATGAA
TCATCAAAATGCAAATACCCTGAAAGCGGCAAGAGAGGTCTACCTCTCGG
ATATCTCAATCAATTAGAGCAAAGACTTGCAGAAACCGAGTCGGCCCTTT
ATGGTGCTCTCATGGCATTGAGCTCGATGGGACCAGCAACCACTCTGCTC
CAAGCCACTACGAAGCCGGATTCGTTACAAAAATCGAAAGCTGCACGAAT
GGAGGAATGGTCGCGATTGCCGCTTCGAGATTGGCCTGACATATACCACT
GGAAGGCGTCCATGAGCGATCAATTTACCCTCAACCAGTTGCAAGGGGAA
CCGCTCGTGGAAAGTTCTGCAGTTAGTCATGCCGTTTCAGCTTCGCCTGT
GGCAACTACTGCCCACAGCCACAGCCCTCAAGGTGAAATAGAAGCCCCGG
TACCGGCTAGTTTTGCTTGGCACCCAGGAGAAGGTGTCCACATGAATAGT
CCTTATAACGTCTACCTCCAACCCCCTGGAATGGTGTCTTCTCCGGTATA
CCCAAGAGACCCAGCTTCCGGGTCAACTGGGGCTATAATTAATCCTTTTC
CCGATTATAGTAACGCCACGGCGACGGGGGATAGTGGGAAACAAAATGAT
CACTCCACGATGGCGGACGAGCTGTCTAAAAGCAAGCCGAGTATATACTT
TTGAATGGGACGGCAACGATCTAAACGGGCATCCAGCTCCGATATGCCAG
AGGATGATGATGTTCTAAGTCCTATCTCCTGCGAGGTATGCAGGCAGCGG
AAATGCAAGTGCGATCGGAGACTCCCTTTTTGCTCTCAATGCTCCAATGA
ATCATCAAAATGCAAATACCCTGAAAGCGGCAAGAGAGGTCTACCTCTCG
GATATCTCAATCAATTAGAGCAAAGACTTGCAGAAACCGAGTCGGCCCTT
TATGGTGCTCTCATGGCATTGAGCTCGATGGGACCAGCAACCACTCTGCT
CCAAGCCACTACGAAGCCGGATTCGTTACAAAAATCGAAAGCTGCACGAA
TGGAGGAATGGTCGCGATTGCCGCTTCGAGATTGGCCTGACATATACCAC
TGGAAGGCGTCCATGAGCGATCAATTTACCCTCAACCAGTTGCAAGGGGA
ACCGCTCGTGGAAAGTTCTGCAGTTAGTCATGCCGTTTCAGCTTCGCCTG
TGGCAACTACTGCCCACAGCCACAGCCCTCAAGGTGAAATAGAAGCCCCG
GTACCGGCTAGTTTTGCTTGGCACCCAGGAGAAGGTGTCCACATGAATAG
TCCTTATAACGTCTACCTCCAACCCCCTGGAATGGTGTCTTCTCCGGTAT
ACCCAAGAGACCCAGCTTCCGGGTCAACTGGGGCTATAATTAATCCTTTT
CCCGATTATAGTAACGCCACGGCGACGGGGGATAGTGGGAAACAAAATGA
TCACTCCACGATGGCGGACGAGCTGTCTAAAAGCAAGCCGAGTATATACT
TTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003396KJC3_003396Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003396-T3KJC3_003396-T3-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003396-T3.utr5p1KJC3_003396-T3.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_003396-T3.utr5p2KJC3_003396-T3.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003396-T3.exon1KJC3_003396-T3.exon1Aspergillus niger KJC3exon
KJC3_003396-T3.exon2KJC3_003396-T3.exon2Aspergillus niger KJC3exon
KJC3_003396-T3.exon3KJC3_003396-T3.exon3Aspergillus niger KJC3exon
KJC3_003396-T3.exon4KJC3_003396-T3.exon4Aspergillus niger KJC3exon
KJC3_003396-T3.exon5KJC3_003396-T3.exon5Aspergillus niger KJC3exon
KJC3_003396-T3.exon6KJC3_003396-T3.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003396-T3.cdsKJC3_003396-T3.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003396-T3.utr3p1KJC3_003396-T3.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1820038..1821404 +
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