You are here

Home

KJC3_003398-T1, KJC3_003398-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003398-T1
Unique NameKJC3_003398-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1824322..1825689+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003398-T1 ID=KJC3_003398-T1|Name=KJC3_003398-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1368bp|location=Sequence derived from alignment at ch3:1824322..1825689+ (Aspergillus niger KJC3)
CGCTAACACTACCCCTCCATCTACCCCTCCATCAATCTCAAATCAATCCA
ATCCTACACCCAACACACCTGATCCACCATGTCTCCCTCCGTCACTCGCA
GAACATACAGCATTGCTTCTATCCCTGCGGATGGAATTGGTCCCGAGGTT
ATCGAGGCCGGTATCACCGCCTTGAATGCTCTGACCGATACGCTCCAGAC
TTTCAAATTAGACTTCAAGCACTATGATTGGAGCTCTGAGACATACAAGA
AGACCGGCAAATACATCCCCGACGGAGGTCTTGACGAATTGAAGAAGCAC
GATGCTATCTTCTTCGGCGCTGTTGGCGCTCCTGGTGAGTATATTGACAT
TGGAAGCAGAGATATTATCTAACAGATACAGATGTTCCTGACCACATCTC
CCTCTGGGGTCTTCGCCTGGCTATCTGCCAGCCCTTCCAACAATATGCCA
ACGTCCGCCCCACTCGAGTCTTCCGGGGTACTCAGTCTCCCCTCCGCAAC
TGCAACATTGGGGATCTCGACTGGGTCATTATCCGCGAGAACAGTGAAGG
CGAGTATGCGGGCCAGGGTGGCCGTTCCCACACAGGCAAGCCTTGGGAGT
CGGCAACCGAAGTTTCTGTCTTCACTCGCCACGCTGTGGAACGTATTATG
CGATTCGCTTTTGAGACTGCTCAGAAGCGCCCTCGCAAGCTCCTGACGGT
TGTTACCAAGAGTAATGCTCAGCGTAACGGAATGGTTCTGTGGGATGAAG
TTGCTAAGGCTACGGCTAAGGTAAGACCACCCGGAGGACATATACGATCA
TCTAAGTACTGACATGGGATTTATTCAGGACTTCCCCGATGTCACCGTTG
ACAAAATGCTGGTTGATGCTATGACCACTCGCATGGTTCTGAACCCCAAG
AGCCTCGATACTATCGTGGCAACCAACTTGCACGCCGATATTTTGTCTGA
CCTGGCCGCTGCTCTGGCTGGATCTATCGGTATTGCTCCTACTTCCAACC
TCGACCCTACCCGCGAGTACCCTAGCATGTTCGAGCCTATCCACGGCTCT
GCTTTCGATATCACTGGCATGGGTATCTCAAACCCTGTTGCTACTTTCTG
GACCGCGGCTGAAATGCTTGCTTGGCTGGGCGAGCAAGAGGCTTCTGAGA
AGCTTCTGACCTGTGTTGAGAATGTTTGCGAGCAGGGCATTCTCACCCGT
GACTTGGGAGGCAAGGCTAACACCAAGGAGGTCACCGATGCTGTTGTTGC
TGAGATCAAGAAGTTGGGCTCCAAGTAGAATGCTAGAATAACTGTATCAT
GGCCTCAAGAGGGCCATTTGCTGTAAATAGAATTGCAGGATTTACGAATT
ACAACTACAAATATTGAG
back to top

Coding sequence (CDS) from alignment at ch3:1824322..1825689+

>KJC3_003398-T1 ID=KJC3_003398-T1|Name=KJC3_003398-T1|organism=Aspergillus niger KJC3|type=CDS|length=3285bp|location=Sequence derived from alignment at ch3:1824322..1825689+ (Aspergillus niger KJC3)
ATGTCTCCCTCCGTCACTCGCAGAACATACAGCATTGCTTCTATCCCTGC
GGATGGAATTGGTCCCGAGGTTATCGAGGCCGGTATCACCGCCTTGAATG
CTCTGACCGATACGCTCCAGACTTTCAAATTAGACTTCAAGCACTATGAT
TGGAGCTCTGAGACATACAAGAAGACCGGCAAATACATCCCCGACGGAGG
TCTTGACGAATTGAAGAAGCACGATGCTATCTTCTTCGGCGCTGTTGGCG
CTCCTGATGTTCCTGACCACATCTCCCTCTGGGGTCTTCGCCTGGCTATC
TGCCAGCCCTTCCAACAATATGCCAACGTCCGCCCCACTCGAGTCTTCCG
GGGTACTCAGTCTCCCCTCCGCAACTGCAACATTGGGGATCTCGACTGGG
TCATTATCCGCGAGAACAGTGAAGGCGAGTATGCGGGCCAGGGTGGCCGT
TCCCACACAGGCAAGCCTTGGGAGTCGGCAACCGAAGTTTCTGTCTTCAC
TCGCCACGCTGTGGAACGTATTATGCGATTCGCTTTTGAGACTGCTCAGA
AGCGCCCTCGCAAGCTCCTGACGGTTGTTACCAAGAGTAATGCTCAGCGT
AACGGAATGGTTCTGTGGGATGAAGTTGCTAAGGCTACGGCTAAGGACTT
CCCCGATGTCACCGTTGACAAAATGCTGGTTGATGCTATGACCACTCGCA
TGGTTCTGAACCCCAAGAGCCTCGATACTATCGTGGCAACCAACTTGCAC
GCCGATATTTTGTCTGACCTGGCCGCTGCTCTGGCTGGATCTATCGGTAT
TGCTCCTACTTCCAACCTCGACCCTACCCGCGAGTACCCTAGCATGTTCG
AGCCTATCCACGGCTCTGCTTTCGATATCACTGGCATGGGTATCTCAAAC
CCTGTTGCTACTTTCTGGACCGCGGCTGAAATGCTTGCTTGGCTGGGCGA
GCAAGAGGCTTCTGAGAAGCTTCTGACCTGTGTTGAGAATGTTTGCGAGC
AGGGCATTCTCACCCGTGACTTGGGAGGCAAGGCTAACACCAAGGAGGTC
ACCGATGCTGTTGTTGCTGAGATCAAGAAGTTGGGCTCCAAGTAGATGTC
TCCCTCCGTCACTCGCAGAACATACAGCATTGCTTCTATCCCTGCGGATG
GAATTGGTCCCGAGGTTATCGAGGCCGGTATCACCGCCTTGAATGCTCTG
ACCGATACGCTCCAGACTTTCAAATTAGACTTCAAGCACTATGATTGGAG
CTCTGAGACATACAAGAAGACCGGCAAATACATCCCCGACGGAGGTCTTG
ACGAATTGAAGAAGCACGATGCTATCTTCTTCGGCGCTGTTGGCGCTCCT
GATGTTCCTGACCACATCTCCCTCTGGGGTCTTCGCCTGGCTATCTGCCA
GCCCTTCCAACAATATGCCAACGTCCGCCCCACTCGAGTCTTCCGGGGTA
CTCAGTCTCCCCTCCGCAACTGCAACATTGGGGATCTCGACTGGGTCATT
ATCCGCGAGAACAGTGAAGGCGAGTATGCGGGCCAGGGTGGCCGTTCCCA
CACAGGCAAGCCTTGGGAGTCGGCAACCGAAGTTTCTGTCTTCACTCGCC
ACGCTGTGGAACGTATTATGCGATTCGCTTTTGAGACTGCTCAGAAGCGC
CCTCGCAAGCTCCTGACGGTTGTTACCAAGAGTAATGCTCAGCGTAACGG
AATGGTTCTGTGGGATGAAGTTGCTAAGGCTACGGCTAAGGACTTCCCCG
ATGTCACCGTTGACAAAATGCTGGTTGATGCTATGACCACTCGCATGGTT
CTGAACCCCAAGAGCCTCGATACTATCGTGGCAACCAACTTGCACGCCGA
TATTTTGTCTGACCTGGCCGCTGCTCTGGCTGGATCTATCGGTATTGCTC
CTACTTCCAACCTCGACCCTACCCGCGAGTACCCTAGCATGTTCGAGCCT
ATCCACGGCTCTGCTTTCGATATCACTGGCATGGGTATCTCAAACCCTGT
TGCTACTTTCTGGACCGCGGCTGAAATGCTTGCTTGGCTGGGCGAGCAAG
AGGCTTCTGAGAAGCTTCTGACCTGTGTTGAGAATGTTTGCGAGCAGGGC
ATTCTCACCCGTGACTTGGGAGGCAAGGCTAACACCAAGGAGGTCACCGA
TGCTGTTGTTGCTGAGATCAAGAAGTTGGGCTCCAAGTAGATGTCTCCCT
CCGTCACTCGCAGAACATACAGCATTGCTTCTATCCCTGCGGATGGAATT
GGTCCCGAGGTTATCGAGGCCGGTATCACCGCCTTGAATGCTCTGACCGA
TACGCTCCAGACTTTCAAATTAGACTTCAAGCACTATGATTGGAGCTCTG
AGACATACAAGAAGACCGGCAAATACATCCCCGACGGAGGTCTTGACGAA
TTGAAGAAGCACGATGCTATCTTCTTCGGCGCTGTTGGCGCTCCTGATGT
TCCTGACCACATCTCCCTCTGGGGTCTTCGCCTGGCTATCTGCCAGCCCT
TCCAACAATATGCCAACGTCCGCCCCACTCGAGTCTTCCGGGGTACTCAG
TCTCCCCTCCGCAACTGCAACATTGGGGATCTCGACTGGGTCATTATCCG
CGAGAACAGTGAAGGCGAGTATGCGGGCCAGGGTGGCCGTTCCCACACAG
GCAAGCCTTGGGAGTCGGCAACCGAAGTTTCTGTCTTCACTCGCCACGCT
GTGGAACGTATTATGCGATTCGCTTTTGAGACTGCTCAGAAGCGCCCTCG
CAAGCTCCTGACGGTTGTTACCAAGAGTAATGCTCAGCGTAACGGAATGG
TTCTGTGGGATGAAGTTGCTAAGGCTACGGCTAAGGACTTCCCCGATGTC
ACCGTTGACAAAATGCTGGTTGATGCTATGACCACTCGCATGGTTCTGAA
CCCCAAGAGCCTCGATACTATCGTGGCAACCAACTTGCACGCCGATATTT
TGTCTGACCTGGCCGCTGCTCTGGCTGGATCTATCGGTATTGCTCCTACT
TCCAACCTCGACCCTACCCGCGAGTACCCTAGCATGTTCGAGCCTATCCA
CGGCTCTGCTTTCGATATCACTGGCATGGGTATCTCAAACCCTGTTGCTA
CTTTCTGGACCGCGGCTGAAATGCTTGCTTGGCTGGGCGAGCAAGAGGCT
TCTGAGAAGCTTCTGACCTGTGTTGAGAATGTTTGCGAGCAGGGCATTCT
CACCCGTGACTTGGGAGGCAAGGCTAACACCAAGGAGGTCACCGATGCTG
TTGTTGCTGAGATCAAGAAGTTGGGCTCCAAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0051287NAD binding
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003398KJC3_003398Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003398-T1KJC3_003398-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003398-T1.utr5p1KJC3_003398-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003398-T1.exon1KJC3_003398-T1.exon1Aspergillus niger KJC3exon
KJC3_003398-T1.exon2KJC3_003398-T1.exon2Aspergillus niger KJC3exon
KJC3_003398-T1.exon3KJC3_003398-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003398-T1.cdsKJC3_003398-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003398-T1.utr3p1KJC3_003398-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR019818
DBxrefInterPro:IPR011829
DBxrefInterPro:IPR024084
DBxrefPFAM:PF00180
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1824322..1825689 +
Powered by Drupal