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KJC3_003399-T1, KJC3_003399-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003399-T1
Unique NameKJC3_003399-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1826451..1828022+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003399-T1 ID=KJC3_003399-T1|Name=KJC3_003399-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1572bp|location=Sequence derived from alignment at ch3:1826451..1828022+ (Aspergillus niger KJC3)
ATGTCTCGACAACTTTTGCACCTTACTGGCAGTGCTTTACGCATGGCCCA
GGTTATCCTTATCGTTGCTCCCGCTTTTATCATCTTCGGCTACAACCAGG
CTGGGGCTGGTCCCCTTGCTACCCTCCAATCTTGGGTTAAGGTCTTTCCC
CAGATCGATACAATCAATACGACAGGTGCTCTAGAAGCGAAGAATTCTAC
TGGAAAGGGAGCTGTCATTGCGTCTTTCCAAATTGGTGCGCTGATAGGTG
CGCTGTCATGTACTGTCATCTCAGATCGTCTAGGGCGACGCAAGACTATT
TTCATCGGTTCTATTCTCACTATCATTGGTCAATTACTCCAAGTATCAGC
CTATTCTTTGATTCAATTTACTGTTGGCCGAATCATTCTGGGTATCGGTA
CCGGTCAATTCAGTGTTGCTGTCCCTGTTTGGCAATCTGAATGCTCTTCC
GCCAAGCATCGTGGTCAGCATGTCATCGCCGACGGTATTTTTATGTGTCT
GGGATATGCTCTGTGCAACTGGATCGACTTTGCTTTCAGTCGGCTATCTG
GTGAAAATACCGGCCAATGGCGTGGACCGCTGTCACTGTCCTTCCTGCCA
TCACTGGTGATCTTGGTCGCGGTCTTCTTACTTCCTGAGTCACCACGTTG
GTTGGTAAGAGTGAACCGTACCGAAGAGGCATCCGCTAGCCTTGCCGCAT
ACAAGGGCATGTCTCCGGAAGATGAAGCTATCAAGTCAGAAATTTCTGGT
ATTGAACTATCATTTGAGAATACCACCCAGTCAACAAGGGCGATCCGTGA
AATGTTCTCCAAAGATGATGACGAACGTTTATTCTATCGCTTCTGTCTCT
GCATCGTCTTGCAATTCTTCCAACAAATGTGTGGTGGAAACCTTATCTCA
GTCTACGCCTCTACCATCTTCGAACAAAATCTGGGTCTGAGCTCTAGTCT
TTCAAGAATCCTTGCAGCATCTGCCCTGACATGGAAGTTTGTATGCTGCT
TTATCTCCTTCTTTGCCATTGATCGACTAGGCCGGCGTGCAGTATTTATG
ATCAGCGGTACAGGCATGGCATTCTGCATGGCTGCATTGGCCATCACCAC
TAGCTTCGGGGTTGAAAACAGACAGGCGTCGATCGCATCCGTGGTGTTTA
TTTTCATGTTTAATCTCTTCTATCCCATTGGCTTCCTGGGTGGTAATTTC
CTGTACTGCACGGAAGTTGCGCCCCAGCGTCTTCGAGTCGCGATGTCAGC
TATCTCCACTGCCAACCACTGGTTGTGGAACTTTGTTGTTGTGATGATTA
CTCCGGTCGCTTTGGATACTATCGGCTACCGGTACTATATCATGTACGCG
ATCTTATCTGCCTGCATTCCGGTTCTGGTGTATTTCTTCTATCCGGAGAC
TATGAACCGGAACTTGGAGTTGATCAACCACGTCTTCCGGGATGCGTCGT
CGCCTTGGCAGATTGTCTCTATGGCGCGTCATCTTCCTCAGGGAGAAATT
ACCCCGGCAGAGCTGGTTGCCTATAACAAGGAGAAGGACGATTGCTCTGT
TGAGATGAGAGAACATGCATGA
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Coding sequence (CDS) from alignment at ch3:1826451..1828022+

>KJC3_003399-T1 ID=KJC3_003399-T1|Name=KJC3_003399-T1|organism=Aspergillus niger KJC3|type=CDS|length=1572bp|location=Sequence derived from alignment at ch3:1826451..1828022+ (Aspergillus niger KJC3)
ATGTCTCGACAACTTTTGCACCTTACTGGCAGTGCTTTACGCATGGCCCA
GGTTATCCTTATCGTTGCTCCCGCTTTTATCATCTTCGGCTACAACCAGG
CTGGGGCTGGTCCCCTTGCTACCCTCCAATCTTGGGTTAAGGTCTTTCCC
CAGATCGATACAATCAATACGACAGGTGCTCTAGAAGCGAAGAATTCTAC
TGGAAAGGGAGCTGTCATTGCGTCTTTCCAAATTGGTGCGCTGATAGGTG
CGCTGTCATGTACTGTCATCTCAGATCGTCTAGGGCGACGCAAGACTATT
TTCATCGGTTCTATTCTCACTATCATTGGTCAATTACTCCAAGTATCAGC
CTATTCTTTGATTCAATTTACTGTTGGCCGAATCATTCTGGGTATCGGTA
CCGGTCAATTCAGTGTTGCTGTCCCTGTTTGGCAATCTGAATGCTCTTCC
GCCAAGCATCGTGGTCAGCATGTCATCGCCGACGGTATTTTTATGTGTCT
GGGATATGCTCTGTGCAACTGGATCGACTTTGCTTTCAGTCGGCTATCTG
GTGAAAATACCGGCCAATGGCGTGGACCGCTGTCACTGTCCTTCCTGCCA
TCACTGGTGATCTTGGTCGCGGTCTTCTTACTTCCTGAGTCACCACGTTG
GTTGGTAAGAGTGAACCGTACCGAAGAGGCATCCGCTAGCCTTGCCGCAT
ACAAGGGCATGTCTCCGGAAGATGAAGCTATCAAGTCAGAAATTTCTGGT
ATTGAACTATCATTTGAGAATACCACCCAGTCAACAAGGGCGATCCGTGA
AATGTTCTCCAAAGATGATGACGAACGTTTATTCTATCGCTTCTGTCTCT
GCATCGTCTTGCAATTCTTCCAACAAATGTGTGGTGGAAACCTTATCTCA
GTCTACGCCTCTACCATCTTCGAACAAAATCTGGGTCTGAGCTCTAGTCT
TTCAAGAATCCTTGCAGCATCTGCCCTGACATGGAAGTTTGTATGCTGCT
TTATCTCCTTCTTTGCCATTGATCGACTAGGCCGGCGTGCAGTATTTATG
ATCAGCGGTACAGGCATGGCATTCTGCATGGCTGCATTGGCCATCACCAC
TAGCTTCGGGGTTGAAAACAGACAGGCGTCGATCGCATCCGTGGTGTTTA
TTTTCATGTTTAATCTCTTCTATCCCATTGGCTTCCTGGGTGGTAATTTC
CTGTACTGCACGGAAGTTGCGCCCCAGCGTCTTCGAGTCGCGATGTCAGC
TATCTCCACTGCCAACCACTGGTTGTGGAACTTTGTTGTTGTGATGATTA
CTCCGGTCGCTTTGGATACTATCGGCTACCGGTACTATATCATGTACGCG
ATCTTATCTGCCTGCATTCCGGTTCTGGTGTATTTCTTCTATCCGGAGAC
TATGAACCGGAACTTGGAGTTGATCAACCACGTCTTCCGGGATGCGTCGT
CGCCTTGGCAGATTGTCTCTATGGCGCGTCATCTTCCTCAGGGAGAAATT
ACCCCGGCAGAGCTGGTTGCCTATAACAAGGAGAAGGACGATTGCTCTGT
TGAGATGAGAGAACATGCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003399KJC3_003399Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003399-T1.exon1KJC3_003399-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003399-T1.cdsKJC3_003399-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003399-T1KJC3_003399-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1826451..1828022 +
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