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KJC3_003401-T1, KJC3_003401-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003401-T1
Unique NameKJC3_003401-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1831786..1833996+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003401-T1 ID=KJC3_003401-T1|Name=KJC3_003401-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2211bp|location=Sequence derived from alignment at ch3:1831786..1833996+ (Aspergillus niger KJC3)
ATGGTTTCTCCAGCCAGTGGGAAACGCCGACTGCGCGCCTCCAAGGCGTG
TCAGAGATGCAGTCGGCGCAAGGTCAAGTGTGATGTTGCTGATCTGGGCT
GCCCTTGCAGCCGCTGCCGCATGGATAACATCACGGAGTGTACATTGGTA
ACCTCCCGTCGAGGCACCTATGACCGAACAAGTTTTCGACGACAAATAGC
GAGGACTGTACCATCTGCATCATTAACGTCACCACCGCCAATGTTACAGT
CATCATCGCATGTTCCTGAAGCTATTCTGACTGCCTCGTCAACACGGTCG
ACTGCATCGAGCGTCCGGAGTCCCGTGCAGGGTCTGCCCTCGCGCCAGTT
CGTGGGCGAAGAAAATCGTCCAAACTCCACTTCCGCAGCACACCGGCTGG
AGATCATTTTAAATATGGATCAGCCAGTCAGCGACCCTCATGCTGTAGAT
TTGACGCGTCCGCCTGACAGTGCACCATCAGCCTCCGCGACAGACCTGTC
GGATCACCGATCACTATCAACAAGGTTTGAAGACTTCCTCGGCCAGGTGG
GGCATCGAAGTTTGTGCAATTCAAAGCTAGTTTTGTTCGGAGAGCCTTCA
CCCTTGACCTTTGCCCTGAAGCTGCAGAAAGGCATCCACTCAGATCTCCA
TGATGCGAGCCAACGCGCCTTATCTAGTGATTCGCTGGCTGTTGTCGAGG
ACAATGTTCATCCGGAACACCTACATCCGCATGATGTTGACTGTTTGAAA
GCAAAGGGGGCGTTCATTTACCCGGAGCCGAACATTCTGGAGGAGATGAT
CAACGCTTTTCTGGAGCATTTCTACCCTTTATACTCCGTCGTGGATCCAA
TAGATCTACGCAAGGCGCAGCAAGAGCGGAAACTGCCATGGATCCTGCTT
CATTCAGTGTGTTTCGTCGCGATGACTTTCTGCGAGCCTCCTCTGATCTA
CAAGGCCGGGTTTAGCTCTCGTGCACAGGCACGTAAGGCCTACTACGACC
GTGCCAAGGCTCTCTTTGACTTCAACTACGAGAACCGTAAGATAGTCCTA
GTCAAGGTGGCGATCCTGCTCAGCTTTAAGGGCCCTCAAATGGATTGTTA
CTGGAATCCGTGCTCGTGGATTGAGATCGGGGTGACCATGGCGGTGGCCA
TGGGACTGCACCGCAGGTATATTGCAATGAGCGGGAACTCTCGTGACAAA
GGTCTGCTTAGACGGTTATGGTGGACATTAGTTGTCCGTGATGCCCATTG
TTCCGCCCTTCTTGGCCGACCATTTCGGATAAACATGTCCCAGGTTGATA
TTGAAATGTTAGCGGAGGATGACTTTCCCGACGTGCACACATGCCGATCC
CAAACAACGTCATCAAGCTGCAACTGTCGCCAGTCAATTGAATACCAGAT
ACAAGCCACAAAGCTATCCCTTATTCTTCGAGGAATCATGTTCTTCCGCT
TCGGGCCGACAAGTGGAAGCTCGACCACTAATCACATCCACGAGCAATTG
GACCGCTGGAAATCACAGCTCCCCCCTATCATGCAGTGCCACAGGGGCCA
ATTCTCTACATCATTTTTTGCTCTGCAACTCGAGATCCTGCTGAATTACC
ACATTATGCTCCTCCACATGGACCGACACCTAGAATCCAAACCTAATGAC
TCGTCACTCCCAACCACAATGTCTAGCAGCTACAACTCCACCGCAATTAC
CGAGTCAGCAGCCCTAGCCGTTTCATCAAGTGCTATTAAGCTAATGACAC
GGACTTCCATCAGCGACGTTCCTCATGAAGTCTTCCCTGGGTTTTTTGTG
GCAGGGATCGTCCTCTACCAACAGGCACATCGAATGCAAGACAACCACTT
CGCAAGCATGGTCCGTGCAAGCTTCGATAACTGCCAGATGCTCTTAAGCC
AAGCCCAAAATACTTGGGACCCCGGGGTGTGGGCGATGAGGGTATTTGAG
TTCCTTTTGTTTGTCGCCGACGCAGCCGACGCAGCAGAAGCCACGAGGAC
ATCGGGAGACACTCACGGCTACCAACCAAACACTACATCTTTGGACACCA
ACACTACTCCATATACACAACCTTCCCATCCAATGCATTCCGACATGGAA
AGTTCAATCTGGTCGGACATCCCAAACATGGAATTTGATCGGAATGTGAC
AATGGATTTGGCGGAATACATGCTTTTGCCGAATTTTTTCACTGCACCGT
TCGGTAACTAG
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Coding sequence (CDS) from alignment at ch3:1831786..1833996+

>KJC3_003401-T1 ID=KJC3_003401-T1|Name=KJC3_003401-T1|organism=Aspergillus niger KJC3|type=CDS|length=2211bp|location=Sequence derived from alignment at ch3:1831786..1833996+ (Aspergillus niger KJC3)
ATGGTTTCTCCAGCCAGTGGGAAACGCCGACTGCGCGCCTCCAAGGCGTG
TCAGAGATGCAGTCGGCGCAAGGTCAAGTGTGATGTTGCTGATCTGGGCT
GCCCTTGCAGCCGCTGCCGCATGGATAACATCACGGAGTGTACATTGGTA
ACCTCCCGTCGAGGCACCTATGACCGAACAAGTTTTCGACGACAAATAGC
GAGGACTGTACCATCTGCATCATTAACGTCACCACCGCCAATGTTACAGT
CATCATCGCATGTTCCTGAAGCTATTCTGACTGCCTCGTCAACACGGTCG
ACTGCATCGAGCGTCCGGAGTCCCGTGCAGGGTCTGCCCTCGCGCCAGTT
CGTGGGCGAAGAAAATCGTCCAAACTCCACTTCCGCAGCACACCGGCTGG
AGATCATTTTAAATATGGATCAGCCAGTCAGCGACCCTCATGCTGTAGAT
TTGACGCGTCCGCCTGACAGTGCACCATCAGCCTCCGCGACAGACCTGTC
GGATCACCGATCACTATCAACAAGGTTTGAAGACTTCCTCGGCCAGGTGG
GGCATCGAAGTTTGTGCAATTCAAAGCTAGTTTTGTTCGGAGAGCCTTCA
CCCTTGACCTTTGCCCTGAAGCTGCAGAAAGGCATCCACTCAGATCTCCA
TGATGCGAGCCAACGCGCCTTATCTAGTGATTCGCTGGCTGTTGTCGAGG
ACAATGTTCATCCGGAACACCTACATCCGCATGATGTTGACTGTTTGAAA
GCAAAGGGGGCGTTCATTTACCCGGAGCCGAACATTCTGGAGGAGATGAT
CAACGCTTTTCTGGAGCATTTCTACCCTTTATACTCCGTCGTGGATCCAA
TAGATCTACGCAAGGCGCAGCAAGAGCGGAAACTGCCATGGATCCTGCTT
CATTCAGTGTGTTTCGTCGCGATGACTTTCTGCGAGCCTCCTCTGATCTA
CAAGGCCGGGTTTAGCTCTCGTGCACAGGCACGTAAGGCCTACTACGACC
GTGCCAAGGCTCTCTTTGACTTCAACTACGAGAACCGTAAGATAGTCCTA
GTCAAGGTGGCGATCCTGCTCAGCTTTAAGGGCCCTCAAATGGATTGTTA
CTGGAATCCGTGCTCGTGGATTGAGATCGGGGTGACCATGGCGGTGGCCA
TGGGACTGCACCGCAGGTATATTGCAATGAGCGGGAACTCTCGTGACAAA
GGTCTGCTTAGACGGTTATGGTGGACATTAGTTGTCCGTGATGCCCATTG
TTCCGCCCTTCTTGGCCGACCATTTCGGATAAACATGTCCCAGGTTGATA
TTGAAATGTTAGCGGAGGATGACTTTCCCGACGTGCACACATGCCGATCC
CAAACAACGTCATCAAGCTGCAACTGTCGCCAGTCAATTGAATACCAGAT
ACAAGCCACAAAGCTATCCCTTATTCTTCGAGGAATCATGTTCTTCCGCT
TCGGGCCGACAAGTGGAAGCTCGACCACTAATCACATCCACGAGCAATTG
GACCGCTGGAAATCACAGCTCCCCCCTATCATGCAGTGCCACAGGGGCCA
ATTCTCTACATCATTTTTTGCTCTGCAACTCGAGATCCTGCTGAATTACC
ACATTATGCTCCTCCACATGGACCGACACCTAGAATCCAAACCTAATGAC
TCGTCACTCCCAACCACAATGTCTAGCAGCTACAACTCCACCGCAATTAC
CGAGTCAGCAGCCCTAGCCGTTTCATCAAGTGCTATTAAGCTAATGACAC
GGACTTCCATCAGCGACGTTCCTCATGAAGTCTTCCCTGGGTTTTTTGTG
GCAGGGATCGTCCTCTACCAACAGGCACATCGAATGCAAGACAACCACTT
CGCAAGCATGGTCCGTGCAAGCTTCGATAACTGCCAGATGCTCTTAAGCC
AAGCCCAAAATACTTGGGACCCCGGGGTGTGGGCGATGAGGGTATTTGAG
TTCCTTTTGTTTGTCGCCGACGCAGCCGACGCAGCAGAAGCCACGAGGAC
ATCGGGAGACACTCACGGCTACCAACCAAACACTACATCTTTGGACACCA
ACACTACTCCATATACACAACCTTCCCATCCAATGCATTCCGACATGGAA
AGTTCAATCTGGTCGGACATCCCAAACATGGAATTTGATCGGAATGTGAC
AATGGATTTGGCGGAATACATGCTTTTGCCGAATTTTTTCACTGCACCGT
TCGGTAACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677DNA binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003401KJC3_003401Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003401-T1.exon1KJC3_003401-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003401-T1.cdsKJC3_003401-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003401-T1KJC3_003401-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1831786..1833996 +
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