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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1865401..1866900+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003413-T1 ID=KJC3_003413-T1|Name=KJC3_003413-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1500bp|location=Sequence derived from alignment at ch3:1865401..1866900+ (Aspergillus niger KJC3)
ATTAATTACTTCCATCTCTTTGGATCATTCCCAATCCCGATATTAGCCGC
AATATCCGTTACAAGCACCCAATCCGGGTAGATAGGCAATAGTATATAAT
GCAGATCTTGGGAGTTTATACCACCTACCAGCTCCTTCTCCAGTTCACAA
GAAAAAATGGTTGAAAAAGGGGAGGCAAATTATCCCGAGGCCCTGTTCGC
GAGGCTGGAAGACTCATTGGAGAAGGCCATCGAAGATGGCGTATTTCCCG
GTGTGGTAGTGGCAGCGACAAATAAGACTGGATCTCTGCGATATGTTAAG
GCATTTGGGAGATCTGCCTGCAATGACACGGGCGTACCGTTGTCGCCCCA
ATCCGTTATGGCCTTTGCGTCTATGACCAAGCTTATGACTTGCATCGCGG
CGTTGCAACTAGTTGAACGAGGAACTATAAGTCTAGATGATGACGTTGGA
CCTCTACTTCCCGATCTAGCGCAGTCAAAGATACTTACAGGATGGGACAA
GGAAGGCATGCCGCTCCTGAGAGAACGCCAAAATCCGATTACTCTTCGAC
ACCTCCTGACGCACACTGCCGGGACAGGCTATGATATGACGAACTCGGAT
CTAGCCAGGTTTTCAGCGTGTCAAGGTCGGCACATTAACTCTGGCGAGAC
GGTCAAGGAAAGATTTGGATACCCTTTGACTTACGAGCCAGGGACGAGTT
TCGAGTATGGTTGTGGTATCGACTGGGTTGGTCAGCTAGTGGAAAAACTA
TCTGGTCAGGATCTAGAAAGTTATATGCAGGAGAATATCTGGGGTCCGCT
TGGAATACAGGGAATTACCTTCTGGCCAGCAGCTAAGCCAGATATCCGCA
ATAACCAAATCCGCATGGCAATTAGGGAACCCAACTCAGAACGTGTGACC
GACTTCACAGGACGATTCTTAACTGAAGGGGTAACAGAATGCTTTGGTAG
CCAAGGTGCTTATGGGGACATGGAGAGTTACTTAGAAATTCTCTTCTCAC
TACTAGTTGATGACGAGAAGCTGTTGAGTTGGCAGACCACAGAAAAATTG
TTTAGCCCGCAGCTGAGCCACTCAAGCAAGCATTCGCTGAATGAATACAT
CAGAAACCACCCCCCGAATGCGTTCATTGGCATATTCGATACCGAATCCG
AATATGACTGGGGGCTCGGCGGCATACTGACCACGCAAGATACGCCGTCG
GGGCGACAGAAGGGAACACTAATCTGGAGCGGAAAGCCAAATTTATTCTG
GGTATGTCCTCCCAGCCTGCGGATATTAGTTATAGGTCCACTGACGTAGC
TAAAACAGTTTATTGACCGTCTTTCTGGACTTTGCGGTGTGTTCGGGGTA
CAGGTTCTCCCTCCCGGAGATGAGAAGATAGGCAAGATGATACAGATATT
TGAGAACACGTTGTATAGCGCCCGAGAAACACGGAGGATTGTTTGAGGAG
AGTCATTAAAGAGTGGATTATGTCTATATCTAAACAAAATTGTAGTGGAT
back to topCoding sequence (CDS) from alignment at ch3:1865401..1866900+ >KJC3_003413-T1 ID=KJC3_003413-T1|Name=KJC3_003413-T1|organism=Aspergillus niger KJC3|type=CDS|length=2466bp|location=Sequence derived from alignment at ch3:1865401..1866900+ (Aspergillus niger KJC3)
ATGGTTGAAAAAGGGGAGGCAAATTATCCCGAGGCCCTGTTCGCGAGGCT
GGAAGACTCATTGGAGAAGGCCATCGAAGATGGCGTATTTCCCGGTGTGG
TAGTGGCAGCGACAAATAAGACTGGATCTCTGCGATATGTTAAGGCATTT
GGGAGATCTGCCTGCAATGACACGGGCGTACCGTTGTCGCCCCAATCCGT
TATGGCCTTTGCGTCTATGACCAAGCTTATGACTTGCATCGCGGCGTTGC
AACTAGTTGAACGAGGAACTATAAGTCTAGATGATGACGTTGGACCTCTA
CTTCCCGATCTAGCGCAGTCAAAGATACTTACAGGATGGGACAAGGAAGG
CATGCCGCTCCTGAGAGAACGCCAAAATCCGATTACTCTTCGACACCTCC
TGACGCACACTGCCGGGACAGGCTATGATATGACGAACTCGGATCTAGCC
AGGTTTTCAGCGTGTCAAGGTCGGCACATTAACTCTGGCGAGACGGTCAA
GGAAAGATTTGGATACCCTTTGACTTACGAGCCAGGGACGAGTTTCGAGT
ATGGTTGTGGTATCGACTGGGTTGGTCAGCTAGTGGAAAAACTATCTGGT
CAGGATCTAGAAAGTTATATGCAGGAGAATATCTGGGGTCCGCTTGGAAT
ACAGGGAATTACCTTCTGGCCAGCAGCTAAGCCAGATATCCGCAATAACC
AAATCCGCATGGCAATTAGGGAACCCAACTCAGAACGTGTGACCGACTTC
ACAGGACGATTCTTAACTGAAGGGGTAACAGAATGCTTTGGTAGCCAAGG
TGCTTATGGGGACATGGAGAGTTACTTAGAAATTCTCTTCTCACTACTAG
TTGATGACGAGAAGCTGTTGAGTTGGCAGACCACAGAAAAATTGTTTAGC
CCGCAGCTGAGCCACTCAAGCAAGCATTCGCTGAATGAATACATCAGAAA
CCACCCCCCGAATGCGTTCATTGGCATATTCGATACCGAATCCGAATATG
ACTGGGGGCTCGGCGGCATACTGACCACGCAAGATACGCCGTCGGGGCGA
CAGAAGGGAACACTAATCTGGAGCGGAAAGCCAAATTTATTCTGGTTTAT
TGACCGTCTTTCTGGACTTTGCGGTGTGTTCGGGGTACAGGTTCTCCCTC
CCGGAGATGAGAAGATAGGCAAGATGATACAGATATTTGAGAACACGTTG
TATAGCGCCCGAGAAACACGGAGGATTGTTTGAATGGTTGAAAAAGGGGA
GGCAAATTATCCCGAGGCCCTGTTCGCGAGGCTGGAAGACTCATTGGAGA
AGGCCATCGAAGATGGCGTATTTCCCGGTGTGGTAGTGGCAGCGACAAAT
AAGACTGGATCTCTGCGATATGTTAAGGCATTTGGGAGATCTGCCTGCAA
TGACACGGGCGTACCGTTGTCGCCCCAATCCGTTATGGCCTTTGCGTCTA
TGACCAAGCTTATGACTTGCATCGCGGCGTTGCAACTAGTTGAACGAGGA
ACTATAAGTCTAGATGATGACGTTGGACCTCTACTTCCCGATCTAGCGCA
GTCAAAGATACTTACAGGATGGGACAAGGAAGGCATGCCGCTCCTGAGAG
AACGCCAAAATCCGATTACTCTTCGACACCTCCTGACGCACACTGCCGGG
ACAGGCTATGATATGACGAACTCGGATCTAGCCAGGTTTTCAGCGTGTCA
AGGTCGGCACATTAACTCTGGCGAGACGGTCAAGGAAAGATTTGGATACC
CTTTGACTTACGAGCCAGGGACGAGTTTCGAGTATGGTTGTGGTATCGAC
TGGGTTGGTCAGCTAGTGGAAAAACTATCTGGTCAGGATCTAGAAAGTTA
TATGCAGGAGAATATCTGGGGTCCGCTTGGAATACAGGGAATTACCTTCT
GGCCAGCAGCTAAGCCAGATATCCGCAATAACCAAATCCGCATGGCAATT
AGGGAACCCAACTCAGAACGTGTGACCGACTTCACAGGACGATTCTTAAC
TGAAGGGGTAACAGAATGCTTTGGTAGCCAAGGTGCTTATGGGGACATGG
AGAGTTACTTAGAAATTCTCTTCTCACTACTAGTTGATGACGAGAAGCTG
TTGAGTTGGCAGACCACAGAAAAATTGTTTAGCCCGCAGCTGAGCCACTC
AAGCAAGCATTCGCTGAATGAATACATCAGAAACCACCCCCCGAATGCGT
TCATTGGCATATTCGATACCGAATCCGAATATGACTGGGGGCTCGGCGGC
ATACTGACCACGCAAGATACGCCGTCGGGGCGACAGAAGGGAACACTAAT
CTGGAGCGGAAAGCCAAATTTATTCTGGTTTATTGACCGTCTTTCTGGAC
TTTGCGGTGTGTTCGGGGTACAGGTTCTCCCTCCCGGAGATGAGAAGATA
GGCAAGATGATACAGATATTTGAGAACACGTTGTATAGCGCCCGAGAAAC
ACGGAGGATTGTTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003413-T1.utr5p1 | KJC3_003413-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003413-T1.utr3p1 | KJC3_003413-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0006204 |
| DBxref | InterPro:IPR001466 |
| DBxref | InterPro:IPR012338 |
| DBxref | PFAM:PF00144 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1865401..1866900 + |
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