You are here

Home

KJC3_003441-T1, KJC3_003441-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003441-T1
Unique NameKJC3_003441-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1923489..1924197-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003441-T1 ID=KJC3_003441-T1|Name=KJC3_003441-T1|organism=Aspergillus niger KJC3|type=mRNA|length=709bp|location=Sequence derived from alignment at ch3:1923489..1924197- (Aspergillus niger KJC3)
ATGGCGTGCGAGAAAAATCGTCGACTTCGTACCGGTGTTTGCGCTACCAA
GTCTGCTATATTGTACGTTGCATAGAGTAAGTTCTGCAATTCACTAAATA
TCGGGCTGTGGTTAAATCCATACAAATTGTCCCAGACTAAGATCCGTTAG
CGTCCCGAATTCATCAAGATAGCGGCATCAAGAAAAGTGTGCTTATATCC
AATATTATCATTCTTGGTACTTTCCATTCATGAAAGCAGCCAATCTCATC
TTACCATATCTGATTAACGCACACCAGAACGACCGACGTCGAAAATGTCA
CAATATACGATCAGATGGGCGAAATACCGTCTGAGACTCTGTTCGCTGCG
CTAAAAGCTGTTAGCGATGCCGATGCCAAAGTCCTCGCCGACGCGGGTAT
TCGGCTACACCACAACCTCGAAGACCGCACATACCGCGCAGCTCTCCGAC
GACAAGGCTGGAACCCCAGAAAGAGCAATCAGTACGAGCAATTGGCCGAC
TATCTCGCATTTGACTCAAATGCGAACCTCTGCTGCGTGATTGCATAATG
CCAGGTTCGTGTCCTCATCATGCCGAGCGATACTGTACCAGTGGGATCGA
AGATTGTATTTTACAGGCCCCTCTTGGGCTTGTCACCCTGGAAGAAGAGA
GATAGTGATCTCAGCTGGACCTGCTGGCACTGGGGTTGTTAGCAGTTATT
CTTGTTGAC
back to top

Coding sequence (CDS) from alignment at ch3:1923489..1924197-

>KJC3_003441-T1 ID=KJC3_003441-T1|Name=KJC3_003441-T1|organism=Aspergillus niger KJC3|type=CDS|length=666bp|location=Sequence derived from alignment at ch3:1923489..1924197- (Aspergillus niger KJC3)
AACGACCGACGTCGAAAATGTCACAATATACGATCAGATGGGCGAAATAC
CGTCTGAGACTCTGTTCGCTGCGCTAAAAGCTGTTAGCGATGCCGATGCC
AAAGTCCTCGCCGACGCGGGTATTCGGCTACACCACAACCTCGAAGACCG
CACATACCGCGCAGCTCTCCGACGACAAGGCTGGAACCCCAGAAAGAGCA
ATCAGTACGAGCAATTGGCCGACTATCTCGCATTTGACTCAAATGCGAAC
CTCTGCTGCGTGATTGCATAAATGGCGTGCGAGAAAAATCGTCGACTTCG
TACCGGTGTTTGCGCTACCAAGTCTGCTATATTAACGACCGACGTCGAAA
ATGTCACAATATACGATCAGATGGGCGAAATACCGTCTGAGACTCTGTTC
GCTGCGCTAAAAGCTGTTAGCGATGCCGATGCCAAAGTCCTCGCCGACGC
GGGTATTCGGCTACACCACAACCTCGAAGACCGCACATACCGCGCAGCTC
TCCGACGACAAGGCTGGAACCCCAGAAAGAGCAATCAGTACGAGCAATTG
GCCGACTATCTCGCATTTGACTCAAATGCGAACCTCTGCTGCGTGATTGC
ATAAATGGCGTGCGAGAAAAATCGTCGACTTCGTACCGGTGTTTGCGCTA
CCAAGTCTGCTATATT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003441KJC3_003441Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003441-T1KJC3_003441-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003441-T1.cdsKJC3_003441-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003441-T1.utr3p1KJC3_003441-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003441-T1.exon2KJC3_003441-T1.exon2Aspergillus niger KJC3exon
KJC3_003441-T1.exon1KJC3_003441-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1923489..1924197 -
Powered by Drupal