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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1941057..1942568- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003449-T1 ID=KJC3_003449-T1|Name=KJC3_003449-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1512bp|location=Sequence derived from alignment at ch3:1941057..1942568- (Aspergillus niger KJC3)
GTTTTGTTTACCCACCGGTTACAGCATGCAGGGCGTATTCTTTGCAAGCC
ACCATGAACCTGCAACAAGCTATACAGCATTTCTTCTCAATCAACACACA
ACAAGCAGATTCTGACGATGCTATCTCTCGAAGTCATCTCGTCGCTCACA
AGCTCGGCGAAATCCCCCGCTGCTCAGTACTGGCCCCGGTCTACCACCTA
ACCTCCTACTAACCTCTTGCACATAGTTAAACTGCCTCTATCCTCTTATC
CTCTCCACCTGCTCCCATACCGACTACACATGTCTGTGCACCAACTTACC
AACAGTAGCAGCGACTGCACAATTTCAATCATGTTTCCACGAATGTCCCA
TCCACCCCGACCAGCGATGTCAGTACATCCCTCTCCCTACCTAACCGACG
CCCTAACTCACAAGTAAACAGTAACACCCAACTCCCTTCTCTCCCTCTGC
AACGTCTTCGACATCCATCCAACCCTCCCAGAATACATGGCGCCAAATAT
TAATCTCAACCGGCGAGGCGAGTACATCAACGAGGTGCGGACCATCTATT
CCATCGTGACAACAATCTACGCATCCACACAATCAACATCCGAACCAACA
TCAACCGAAGACCCATTAGCAACAGCCACCGCGGGAGTGGTCTCGAGCAT
CGACTCGGACGATACATCCTCCTCTACCATCGCTCCCACGACATCCTCAG
ATGACGACACCGCCACAACAACATCCCAACAACCCAACGTCGTCACAGTA
ACAGAGACTCGTCTCGTCTCCACAATGTATATGACCTCAGTAGCAACGCA
AACATCTTCCTCCGATCATAAAGATGCAGCTGGTCTATCCACCGGCGCAA
AGGCCGGAATAGGAGTCGCGGTGCCCATCGCTGTTGCCATCATCGCGCTT
CTAATATTTGCCTGGTTTCAGCGGCGCAGGAAGAGGAAGCAGCAGATGGG
AGGTATTAATAGTAGCGAAGAGAGCGGACAGGCTTCAGCGATACAGCATG
CAGGGGGGAAGAATCAAAGTATGACTCAGAACACTACGAATTTGCTCCCT
GAGATCGACGGTGCGCCACTCAACGAATCCGATAGTCGGCCCGTACATAG
CTCGGCTGATCGGCCTGTGTTTGAGCTGAGTACTGGGTCGGTTCGCAAGC
CGAGGCGGGGTGATCCGGAGATTGGATCTGGGGTTGGTGGGATAAGTGGA
GTGGATGCTAAGCAGGGTGCTAGTGGAGGTGAAGTAGCTTCATCAGCCTC
GGCTACATTGGGCGAAGTACCGGCTGAACTATCGTCTGATGGCGTTAGGG
ACGGGGAATCGATAGCGTCAGTGGTGGCATATGAAAGGATGAGTTCGTCT
GAGTTGCAGGAGGAATTGGCTAGGGTGGCGAGGAGTAGAGAGCGATTGCA
GTATTTACAGACGTTGGAGGAGAGGGAGGATATGATTCGGAGGGTGCTTG
CGGGGCATGGGGAGGATGCGGTGTCAAGGGCTGAGAGTCGGGAAGACGGC
GGTGGTGGGTGA back to topCoding sequence (CDS) from alignment at ch3:1941057..1942568- >KJC3_003449-T1 ID=KJC3_003449-T1|Name=KJC3_003449-T1|organism=Aspergillus niger KJC3|type=CDS|length=4068bp|location=Sequence derived from alignment at ch3:1941057..1942568- (Aspergillus niger KJC3)
TAACACCCAACTCCCTTCTCTCCCTCTGCAACGTCTTCGACATCCATCCA
ACCCTCCCAGAATACATGGCGCCAAATATTAATCTCAACCGGCGAGGCGA
GTACATCAACGAGGTGCGGACCATCTATTCCATCGTGACAACAATCTACG
CATCCACACAATCAACATCCGAACCAACATCAACCGAAGACCCATTAGCA
ACAGCCACCGCGGGAGTGGTCTCGAGCATCGACTCGGACGATACATCCTC
CTCTACCATCGCTCCCACGACATCCTCAGATGACGACACCGCCACAACAA
CATCCCAACAACCCAACGTCGTCACAGTAACAGAGACTCGTCTCGTCTCC
ACAATGTATATGACCTCAGTAGCAACGCAAACATCTTCCTCCGATCATAA
AGATGCAGCTGGTCTATCCACCGGCGCAAAGGCCGGAATAGGAGTCGCGG
TGCCCATCGCTGTTGCCATCATCGCGCTTCTAATATTTGCCTGGTTTCAG
CGGCGCAGGAAGAGGAAGCAGCAGATGGGAGGTATTAATAGTAGCGAAGA
GAGCGGACAGGCTTCAGCGATACAGCATGCAGGGGGGAAGAATCAAAGTA
TGACTCAGAACACTACGAATTTGCTCCCTGAGATCGACGGTGCGCCACTC
AACGAATCCGATAGTCGGCCCGTACATAGCTCGGCTGATCGGCCTGTGTT
TGAGCTGAGTACTGGGTCGGTTCGCAAGCCGAGGCGGGGTGATCCGGAGA
TTGGATCTGGGGTTGGTGGGATAAGTGGAGTGGATGCTAAGCAGGGTGCT
AGTGGAGGTGAAGTAGCTTCATCAGCCTCGGCTACATTGGGCGAAGTACC
GGCTGAACTATCGTCTGATGGCGTTAGGGACGGGGAATCGATAGCGTCAG
TGGTGGCATATGAAAGGATGAGTTCGTCTGAGTTGCAGGAGGAATTGGCT
AGGGTGGCGAGGAGTAGAGAGCGATTGCAGTATTTACAGACGTTGGAGGA
GAGGGAGGATATGATTCGGAGGGTGCTTGCGGGGCATGGGGAGGATGCGG
TGTCAAGGGCTGAGAGTCGGGAAGACGGCGGTGGTGGGTGATTAAACTGC
CTCTATCCTCTTATCCTCTCCACCTGCTCCCATACCGACTACACATGTCT
GTGCACCAACTTACCAACAGTAGCAGCGACTGCACAATTTCAATCATGTT
TCCACGAATGTCCCATCCACCCCGACCAGCGATATGAACCTGCAACAAGC
TATACAGCATTTCTTCTCAATCAACACACAACAAGCAGATTCTGACGATG
CTATCTCTCGAAGTCATCTCGTCGCTCACAAGCTCGGCGAAATCCCCCGC
TGCTCATAACACCCAACTCCCTTCTCTCCCTCTGCAACGTCTTCGACATC
CATCCAACCCTCCCAGAATACATGGCGCCAAATATTAATCTCAACCGGCG
AGGCGAGTACATCAACGAGGTGCGGACCATCTATTCCATCGTGACAACAA
TCTACGCATCCACACAATCAACATCCGAACCAACATCAACCGAAGACCCA
TTAGCAACAGCCACCGCGGGAGTGGTCTCGAGCATCGACTCGGACGATAC
ATCCTCCTCTACCATCGCTCCCACGACATCCTCAGATGACGACACCGCCA
CAACAACATCCCAACAACCCAACGTCGTCACAGTAACAGAGACTCGTCTC
GTCTCCACAATGTATATGACCTCAGTAGCAACGCAAACATCTTCCTCCGA
TCATAAAGATGCAGCTGGTCTATCCACCGGCGCAAAGGCCGGAATAGGAG
TCGCGGTGCCCATCGCTGTTGCCATCATCGCGCTTCTAATATTTGCCTGG
TTTCAGCGGCGCAGGAAGAGGAAGCAGCAGATGGGAGGTATTAATAGTAG
CGAAGAGAGCGGACAGGCTTCAGCGATACAGCATGCAGGGGGGAAGAATC
AAAGTATGACTCAGAACACTACGAATTTGCTCCCTGAGATCGACGGTGCG
CCACTCAACGAATCCGATAGTCGGCCCGTACATAGCTCGGCTGATCGGCC
TGTGTTTGAGCTGAGTACTGGGTCGGTTCGCAAGCCGAGGCGGGGTGATC
CGGAGATTGGATCTGGGGTTGGTGGGATAAGTGGAGTGGATGCTAAGCAG
GGTGCTAGTGGAGGTGAAGTAGCTTCATCAGCCTCGGCTACATTGGGCGA
AGTACCGGCTGAACTATCGTCTGATGGCGTTAGGGACGGGGAATCGATAG
CGTCAGTGGTGGCATATGAAAGGATGAGTTCGTCTGAGTTGCAGGAGGAA
TTGGCTAGGGTGGCGAGGAGTAGAGAGCGATTGCAGTATTTACAGACGTT
GGAGGAGAGGGAGGATATGATTCGGAGGGTGCTTGCGGGGCATGGGGAGG
ATGCGGTGTCAAGGGCTGAGAGTCGGGAAGACGGCGGTGGTGGGTGATTA
AACTGCCTCTATCCTCTTATCCTCTCCACCTGCTCCCATACCGACTACAC
ATGTCTGTGCACCAACTTACCAACAGTAGCAGCGACTGCACAATTTCAAT
CATGTTTCCACGAATGTCCCATCCACCCCGACCAGCGATATGAACCTGCA
ACAAGCTATACAGCATTTCTTCTCAATCAACACACAACAAGCAGATTCTG
ACGATGCTATCTCTCGAAGTCATCTCGTCGCTCACAAGCTCGGCGAAATC
CCCCGCTGCTCATAACACCCAACTCCCTTCTCTCCCTCTGCAACGTCTTC
GACATCCATCCAACCCTCCCAGAATACATGGCGCCAAATATTAATCTCAA
CCGGCGAGGCGAGTACATCAACGAGGTGCGGACCATCTATTCCATCGTGA
CAACAATCTACGCATCCACACAATCAACATCCGAACCAACATCAACCGAA
GACCCATTAGCAACAGCCACCGCGGGAGTGGTCTCGAGCATCGACTCGGA
CGATACATCCTCCTCTACCATCGCTCCCACGACATCCTCAGATGACGACA
CCGCCACAACAACATCCCAACAACCCAACGTCGTCACAGTAACAGAGACT
CGTCTCGTCTCCACAATGTATATGACCTCAGTAGCAACGCAAACATCTTC
CTCCGATCATAAAGATGCAGCTGGTCTATCCACCGGCGCAAAGGCCGGAA
TAGGAGTCGCGGTGCCCATCGCTGTTGCCATCATCGCGCTTCTAATATTT
GCCTGGTTTCAGCGGCGCAGGAAGAGGAAGCAGCAGATGGGAGGTATTAA
TAGTAGCGAAGAGAGCGGACAGGCTTCAGCGATACAGCATGCAGGGGGGA
AGAATCAAAGTATGACTCAGAACACTACGAATTTGCTCCCTGAGATCGAC
GGTGCGCCACTCAACGAATCCGATAGTCGGCCCGTACATAGCTCGGCTGA
TCGGCCTGTGTTTGAGCTGAGTACTGGGTCGGTTCGCAAGCCGAGGCGGG
GTGATCCGGAGATTGGATCTGGGGTTGGTGGGATAAGTGGAGTGGATGCT
AAGCAGGGTGCTAGTGGAGGTGAAGTAGCTTCATCAGCCTCGGCTACATT
GGGCGAAGTACCGGCTGAACTATCGTCTGATGGCGTTAGGGACGGGGAAT
CGATAGCGTCAGTGGTGGCATATGAAAGGATGAGTTCGTCTGAGTTGCAG
GAGGAATTGGCTAGGGTGGCGAGGAGTAGAGAGCGATTGCAGTATTTACA
GACGTTGGAGGAGAGGGAGGATATGATTCGGAGGGTGCTTGCGGGGCATG
GGGAGGATGCGGTGTCAAGGGCTGAGAGTCGGGAAGACGGCGGTGGTGGG
TGATTAAACTGCCTCTATCCTCTTATCCTCTCCACCTGCTCCCATACCGA
CTACACATGTCTGTGCACCAACTTACCAACAGTAGCAGCGACTGCACAAT
TTCAATCATGTTTCCACGAATGTCCCATCCACCCCGACCAGCGATATGAA
CCTGCAACAAGCTATACAGCATTTCTTCTCAATCAACACACAACAAGCAG
ATTCTGACGATGCTATCTCTCGAAGTCATCTCGTCGCTCACAAGCTCGGC
GAAATCCCCCGCTGCTCA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003449-T1.utr5p1 | KJC3_003449-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008427 |
| DBxref | PFAM:PF05730 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1941057..1942568 - |
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