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KJC3_003450-T1, KJC3_003450-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003450-T1
Unique NameKJC3_003450-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1943363..1944845+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003450-T1 ID=KJC3_003450-T1|Name=KJC3_003450-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1483bp|location=Sequence derived from alignment at ch3:1943363..1944845+ (Aspergillus niger KJC3)
CCCTGGATGGCTATAAAACCCGCACAATCCCATAATTCCTACAACAAGAA
CTAAACATTTTATATCGCCCAACCGAGCTAGATATGTCCTCCCCCACCGT
CCTAATAATCGGCTGCGGCATCGCCGGTCCCGTCCTCGCTATTCTCCTAA
AGCGCAAAGGCTACAACCCCATCGTCTTCGAAAAGGTCCAAGCTCTCGGC
GATGCCGGTGCATCATTGATGATACAGCCAAATGGGTATACCTCCCTCTT
ACCATCCCCATCCACAGCCTCATCTTAACAGCTAACAATGAATCAGAATG
AAAATCCTCAACCTCGTCACCCCAACCCACCCCCTCCCAATAATAACCCC
CCTTCAATCCCTCTGGCACGGCACAGCCAGCGGCAAAACCCTCGGCCACT
CCACCCTCCCCTCAACCTACGTGGACCGCTACACCCAGCCCGCGAGCGGT
ATAAAGCGCAGTGTCCTCAACCTCCACCTCAAAACCACGCTCCGAGAACA
CAACATCCCACTGTACGAAGGATACCAACTCAAGAACATCCACGAACTCC
CCCACCAGATAACTGCATCCTTCACCAATGGAAAATCAATCACCGGCACG
TTCCTCATCGGCTGCGACGGAATCAAATCCTCCACGAGAAGGATCCTCCT
CTCCCAAAAAGCAGGAATATCTGAAGGCCCACCTACATTCACTGGCTTGA
TTCAAGTAGCGGGGATATCCAAGATCCCAACTTCCTTATCCGAGAGAGAT
ATATCTCTGAGTAACTGGTACGGCGAGGGAGTGCATGTCGTTGCGTACCC
CATCTCTGCCGAGGAGAATTCCTGGGCTGCTACAATTCCGGATACAGAGG
GTGAGGAGAGTACATGGCGGGCTGCTACTGCAGGAACCGAGGTGGAAGAC
TTACGACAGAAGCTGAGAGAGAAACTACTCGGATTTGAAGACTGTGTTAT
GGAAATGGTGAACACAGCGGAGGGAATCATCTCCTATGGATTGTTCGATC
GACGAGAGGTTCCTGTCGATCAGTGGTTTTCTGATCGCGTAGTGTTGGTG
GGTGATGCGGCGCATCCGACGAGTCCGCATTTGGGTCAGGGGGCGAATCA
GGCTTTGTAAGTTTCTCTCATTCACCCGGAGGGTGATAATGGGGATGAGT
GCTAATGTTGGATTCGGTAGGGAGGATTGCTATCATCTTAGTCGCATGCT
TCCAGATATGAGGGTGGATGGGGTGGCGTGGGATGAGGTCGATCAGGGGC
TATCGGGTATATTTGAGGGGTTTGCGCGGTTGAGACAACCGCGCACCTCG
GCGTTAGTTAAAGAAGCCCGTCGGCTGGGGGAGCAGCGCGTTGTTGTGGG
AGGGCCGGAACGGTGTCGCCAGCGCGATGCAAGAATTGAAGATGCTTGGA
GGGATGAGGAGGCTGTGGCGAGGGGACTGGATGGGCTGTTCAAAGGCCGT
TCTGAGGTTGCTTGTGCTTGTCCACAAACATGA
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Coding sequence (CDS) from alignment at ch3:1943363..1944845+

>KJC3_003450-T1 ID=KJC3_003450-T1|Name=KJC3_003450-T1|organism=Aspergillus niger KJC3|type=CDS|length=3825bp|location=Sequence derived from alignment at ch3:1943363..1944845+ (Aspergillus niger KJC3)
ATGTCCTCCCCCACCGTCCTAATAATCGGCTGCGGCATCGCCGGTCCCGT
CCTCGCTATTCTCCTAAAGCGCAAAGGCTACAACCCCATCGTCTTCGAAA
AGGTCCAAGCTCTCGGCGATGCCGGTGCATCATTGATGATACAGCCAAAT
GGAATGAAAATCCTCAACCTCGTCACCCCAACCCACCCCCTCCCAATAAT
AACCCCCCTTCAATCCCTCTGGCACGGCACAGCCAGCGGCAAAACCCTCG
GCCACTCCACCCTCCCCTCAACCTACGTGGACCGCTACACCCAGCCCGCG
AGCGGTATAAAGCGCAGTGTCCTCAACCTCCACCTCAAAACCACGCTCCG
AGAACACAACATCCCACTGTACGAAGGATACCAACTCAAGAACATCCACG
AACTCCCCCACCAGATAACTGCATCCTTCACCAATGGAAAATCAATCACC
GGCACGTTCCTCATCGGCTGCGACGGAATCAAATCCTCCACGAGAAGGAT
CCTCCTCTCCCAAAAAGCAGGAATATCTGAAGGCCCACCTACATTCACTG
GCTTGATTCAAGTAGCGGGGATATCCAAGATCCCAACTTCCTTATCCGAG
AGAGATATATCTCTGAGTAACTGGTACGGCGAGGGAGTGCATGTCGTTGC
GTACCCCATCTCTGCCGAGGAGAATTCCTGGGCTGCTACAATTCCGGATA
CAGAGGGTGAGGAGAGTACATGGCGGGCTGCTACTGCAGGAACCGAGGTG
GAAGACTTACGACAGAAGCTGAGAGAGAAACTACTCGGATTTGAAGACTG
TGTTATGGAAATGGTGAACACAGCGGAGGGAATCATCTCCTATGGATTGT
TCGATCGACGAGAGGTTCCTGTCGATCAGTGGTTTTCTGATCGCGTAGTG
TTGGTGGGTGATGCGGCGCATCCGACGAGTCCGCATTTGGGTCAGGGGGC
GAATCAGGCTTTGGAGGATTGCTATCATCTTAGTCGCATGCTTCCAGATA
TGAGGGTGGATGGGGTGGCGTGGGATGAGGTCGATCAGGGGCTATCGGGT
ATATTTGAGGGGTTTGCGCGGTTGAGACAACCGCGCACCTCGGCGTTAGT
TAAAGAAGCCCGTCGGCTGGGGGAGCAGCGCGTTGTTGTGGGAGGGCCGG
AACGGTGTCGCCAGCGCGATGCAAGAATTGAAGATGCTTGGAGGGATGAG
GAGGCTGTGGCGAGGGGACTGGATGGGCTGTTCAAAGGCCGTTCTGAGGT
TGCTTGTGCTTGTCCACAAACATGAATGTCCTCCCCCACCGTCCTAATAA
TCGGCTGCGGCATCGCCGGTCCCGTCCTCGCTATTCTCCTAAAGCGCAAA
GGCTACAACCCCATCGTCTTCGAAAAGGTCCAAGCTCTCGGCGATGCCGG
TGCATCATTGATGATACAGCCAAATGGAATGAAAATCCTCAACCTCGTCA
CCCCAACCCACCCCCTCCCAATAATAACCCCCCTTCAATCCCTCTGGCAC
GGCACAGCCAGCGGCAAAACCCTCGGCCACTCCACCCTCCCCTCAACCTA
CGTGGACCGCTACACCCAGCCCGCGAGCGGTATAAAGCGCAGTGTCCTCA
ACCTCCACCTCAAAACCACGCTCCGAGAACACAACATCCCACTGTACGAA
GGATACCAACTCAAGAACATCCACGAACTCCCCCACCAGATAACTGCATC
CTTCACCAATGGAAAATCAATCACCGGCACGTTCCTCATCGGCTGCGACG
GAATCAAATCCTCCACGAGAAGGATCCTCCTCTCCCAAAAAGCAGGAATA
TCTGAAGGCCCACCTACATTCACTGGCTTGATTCAAGTAGCGGGGATATC
CAAGATCCCAACTTCCTTATCCGAGAGAGATATATCTCTGAGTAACTGGT
ACGGCGAGGGAGTGCATGTCGTTGCGTACCCCATCTCTGCCGAGGAGAAT
TCCTGGGCTGCTACAATTCCGGATACAGAGGGTGAGGAGAGTACATGGCG
GGCTGCTACTGCAGGAACCGAGGTGGAAGACTTACGACAGAAGCTGAGAG
AGAAACTACTCGGATTTGAAGACTGTGTTATGGAAATGGTGAACACAGCG
GAGGGAATCATCTCCTATGGATTGTTCGATCGACGAGAGGTTCCTGTCGA
TCAGTGGTTTTCTGATCGCGTAGTGTTGGTGGGTGATGCGGCGCATCCGA
CGAGTCCGCATTTGGGTCAGGGGGCGAATCAGGCTTTGGAGGATTGCTAT
CATCTTAGTCGCATGCTTCCAGATATGAGGGTGGATGGGGTGGCGTGGGA
TGAGGTCGATCAGGGGCTATCGGGTATATTTGAGGGGTTTGCGCGGTTGA
GACAACCGCGCACCTCGGCGTTAGTTAAAGAAGCCCGTCGGCTGGGGGAG
CAGCGCGTTGTTGTGGGAGGGCCGGAACGGTGTCGCCAGCGCGATGCAAG
AATTGAAGATGCTTGGAGGGATGAGGAGGCTGTGGCGAGGGGACTGGATG
GGCTGTTCAAAGGCCGTTCTGAGGTTGCTTGTGCTTGTCCACAAACATGA
ATGTCCTCCCCCACCGTCCTAATAATCGGCTGCGGCATCGCCGGTCCCGT
CCTCGCTATTCTCCTAAAGCGCAAAGGCTACAACCCCATCGTCTTCGAAA
AGGTCCAAGCTCTCGGCGATGCCGGTGCATCATTGATGATACAGCCAAAT
GGAATGAAAATCCTCAACCTCGTCACCCCAACCCACCCCCTCCCAATAAT
AACCCCCCTTCAATCCCTCTGGCACGGCACAGCCAGCGGCAAAACCCTCG
GCCACTCCACCCTCCCCTCAACCTACGTGGACCGCTACACCCAGCCCGCG
AGCGGTATAAAGCGCAGTGTCCTCAACCTCCACCTCAAAACCACGCTCCG
AGAACACAACATCCCACTGTACGAAGGATACCAACTCAAGAACATCCACG
AACTCCCCCACCAGATAACTGCATCCTTCACCAATGGAAAATCAATCACC
GGCACGTTCCTCATCGGCTGCGACGGAATCAAATCCTCCACGAGAAGGAT
CCTCCTCTCCCAAAAAGCAGGAATATCTGAAGGCCCACCTACATTCACTG
GCTTGATTCAAGTAGCGGGGATATCCAAGATCCCAACTTCCTTATCCGAG
AGAGATATATCTCTGAGTAACTGGTACGGCGAGGGAGTGCATGTCGTTGC
GTACCCCATCTCTGCCGAGGAGAATTCCTGGGCTGCTACAATTCCGGATA
CAGAGGGTGAGGAGAGTACATGGCGGGCTGCTACTGCAGGAACCGAGGTG
GAAGACTTACGACAGAAGCTGAGAGAGAAACTACTCGGATTTGAAGACTG
TGTTATGGAAATGGTGAACACAGCGGAGGGAATCATCTCCTATGGATTGT
TCGATCGACGAGAGGTTCCTGTCGATCAGTGGTTTTCTGATCGCGTAGTG
TTGGTGGGTGATGCGGCGCATCCGACGAGTCCGCATTTGGGTCAGGGGGC
GAATCAGGCTTTGGAGGATTGCTATCATCTTAGTCGCATGCTTCCAGATA
TGAGGGTGGATGGGGTGGCGTGGGATGAGGTCGATCAGGGGCTATCGGGT
ATATTTGAGGGGTTTGCGCGGTTGAGACAACCGCGCACCTCGGCGTTAGT
TAAAGAAGCCCGTCGGCTGGGGGAGCAGCGCGTTGTTGTGGGAGGGCCGG
AACGGTGTCGCCAGCGCGATGCAAGAATTGAAGATGCTTGGAGGGATGAG
GAGGCTGTGGCGAGGGGACTGGATGGGCTGTTCAAAGGCCGTTCTGAGGT
TGCTTGTGCTTGTCCACAAACATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003450KJC3_003450Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003450-T1.utr5p1KJC3_003450-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003450-T1.exon1KJC3_003450-T1.exon1Aspergillus niger KJC3exon
KJC3_003450-T1.exon2KJC3_003450-T1.exon2Aspergillus niger KJC3exon
KJC3_003450-T1.exon3KJC3_003450-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003450-T1.cdsKJC3_003450-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003450-T1KJC3_003450-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR002938
DBxrefPFAM:PF01494
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1943363..1944845 +
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