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KJC3_003452-T1, KJC3_003452-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003452-T1
Unique NameKJC3_003452-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1947456..1949285+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003452-T1 ID=KJC3_003452-T1|Name=KJC3_003452-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1830bp|location=Sequence derived from alignment at ch3:1947456..1949285+ (Aspergillus niger KJC3)
TCATGATCAGGACAACAGTTTCTGGTTCATGTCTTACCCAAAGCGTCAGT
TAGGGCTGACAGGAGTCGTCGAAAAGCATCAAGTATCACCCAATGACACC
AGACTCTACAAAGAACGTGTTGGTACCTCTTCACTATGCGACAGATACGA
ACCCCCTAATCTACAAAAACTTCCAGTTAACCCAATGCTAGGAAACTTCG
GTACAACCAGGAATGCTAAATTGGGGCCGCCCCCAACTCTCACCGTCGCA
CGCGAGCTTCCATTTGCTCTCCCCCAGCATGACTACGACCATGCTTTCAA
CGCAGCCACTCTCCTCCCTCACCAAGTTGGAAGGAACTGGACATATCCAA
TGCTACGCATCACTTCGCCTCCACTCATCCAGGCAGGCTGTGTACATCAT
GCCCCCTTTCGCCCCAACGATACGGCCTTATGCAGGAACCAGATCACACC
CCTAATCAACTCTCCTTCTTCCTGCGCTTGAAGTCTCTTACATTCTTCTG
TTTCTATTGGGGTCAGTCTCTCGCTATTCTTCTACCTCGCAGCAAGTTCA
CTGTCTCGCCGTGGGCAACAAACAACATGGCATCACGCTCCTTTTCCTCC
CAGTCCCTCTTGACTGGCTTCCTCCTGACGCTCATTTCCTCCCCCTTCGC
CTCCGCGGAACTCACTCTCGCTTCTAATCCCCAAACCACATCCGCTCCCG
TCGAGACCGTCTCCCTCATTGATGCCAGCGGCATCCCCATCACCACCGCC
AACGACCCCGCCGACAACGCCTGGGTCATCCCCCTGACCGGACCAGCCAG
CGCTCCCACCGGAGCTGCCTGGGGCGCGCAAATCCAATATAACAGTGACC
TGGCTGGAATACTCCCAGTCGCATTCGGGACCCCTACCACCACCGCCAAA
CCCACCGCAACAGCGATAACAAAAGCAGCAGCAGCATCAACAACAACAGC
AACGTTCGTATCAGCCGGCTCGCCCGGCCAAAAGAGCGGAAACTTCGAGC
TCGCAATCGCGTTCAGCAACACCCTCCTCCTGTCGCAAGACACAAGTCTG
AACATCACCTCCACCATAAACAAAACCAACTCAACAACCATCCCCTCCCT
CCCCGTCGGCCTCAACCTCGGCCTCCAAGACAAATGGAACGGCTCCATCG
TGCTGGGAGGTAACTACGACTCCAATCGCATCTACGACGAACCGCACTGG
CAAACCACCCCGGAAACCAGCGCCGGCAACACCAGCTTCATCGATACAGG
CATGCTAGACATCAGCGCCGTTATCCTTGAACTCTACACCACCCCTAACG
CTACAACCAGCAGCGAAGACGCGGAATACCCGTTCGGCGGTACCAGCGTT
CAGGAGACGAGTAAAACTCTCCCCGCCATGCTGGACTTTAATTCGGAGTT
CCTGTCCGTGCCGGATGAATCCTGGTGCGGACGGAATATCTCGATCGTAT
TTAATCCGGATAGCGAGTCATATCCGATATTTGATATTCCAGTTTGGGCC
GAGCTGGTTCCCAAGGAGAGGTGTCAGGTATCCAGTGGTGAGGTTGTGCT
TGGACGGCCGTTCTTCCAGGCTGCCTATGTGTATGTGAACTCGGCGGGCG
ATGTGTATTTCAGTTCGATCACTACGGAGGACGTGGATGTTGCGACCAAG
CCGTTTGACTTGCATGTGCAGCTTTCGGAGGAGGTCAATGGTACTGAGAC
TTATGGGGGAGGGAATGGAACGGCGACAGGGTCGGGGAGTGATGCAACGG
GGACCTCGGGGGCGGGAAGGTTAGGTGTTGAGGGGGTTTGGGGGGTGGTT
GTGGGGATGGGGTTGTTGTTACTGATGTGA
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Coding sequence (CDS) from alignment at ch3:1947456..1949285+

>KJC3_003452-T1 ID=KJC3_003452-T1|Name=KJC3_003452-T1|organism=Aspergillus niger KJC3|type=CDS|length=1401bp|location=Sequence derived from alignment at ch3:1947456..1949285+ (Aspergillus niger KJC3)
ATGCAGGAACCAGATCACACCCCTAATCAACTCTCCTTCTTCCTGCGCTT
GAAGTCTCTTACATTCTTCTGTTTCTATTGGGGTCAGTCTCTCGCTATTC
TTCTACCTCGCAGCAAGTTCACTGTCTCGCCGTGGGCAACAAACAACATG
GCATCACGCTCCTTTTCCTCCCAGTCCCTCTTGACTGGCTTCCTCCTGAC
GCTCATTTCCTCCCCCTTCGCCTCCGCGGAACTCACTCTCGCTTCTAATC
CCCAAACCACATCCGCTCCCGTCGAGACCGTCTCCCTCATTGATGCCAGC
GGCATCCCCATCACCACCGCCAACGACCCCGCCGACAACGCCTGGGTCAT
CCCCCTGACCGGACCAGCCAGCGCTCCCACCGGAGCTGCCTGGGGCGCGC
AAATCCAATATAACAGTGACCTGGCTGGAATACTCCCAGTCGCATTCGGG
ACCCCTACCACCACCGCCAAACCCACCGCAACAGCGATAACAAAAGCAGC
AGCAGCATCAACAACAACAGCAACGTTCGTATCAGCCGGCTCGCCCGGCC
AAAAGAGCGGAAACTTCGAGCTCGCAATCGCGTTCAGCAACACCCTCCTC
CTGTCGCAAGACACAAGTCTGAACATCACCTCCACCATAAACAAAACCAA
CTCAACAACCATCCCCTCCCTCCCCGTCGGCCTCAACCTCGGCCTCCAAG
ACAAATGGAACGGCTCCATCGTGCTGGGAGGTAACTACGACTCCAATCGC
ATCTACGACGAACCGCACTGGCAAACCACCCCGGAAACCAGCGCCGGCAA
CACCAGCTTCATCGATACAGGCATGCTAGACATCAGCGCCGTTATCCTTG
AACTCTACACCACCCCTAACGCTACAACCAGCAGCGAAGACGCGGAATAC
CCGTTCGGCGGTACCAGCGTTCAGGAGACGAGTAAAACTCTCCCCGCCAT
GCTGGACTTTAATTCGGAGTTCCTGTCCGTGCCGGATGAATCCTGGTGCG
GACGGAATATCTCGATCGTATTTAATCCGGATAGCGAGTCATATCCGATA
TTTGATATTCCAGTTTGGGCCGAGCTGGTTCCCAAGGAGAGGTGTCAGGT
ATCCAGTGGTGAGGTTGTGCTTGGACGGCCGTTCTTCCAGGCTGCCTATG
TGTATGTGAACTCGGCGGGCGATGTGTATTTCAGTTCGATCACTACGGAG
GACGTGGATGTTGCGACCAAGCCGTTTGACTTGCATGTGCAGCTTTCGGA
GGAGGTCAATGGTACTGAGACTTATGGGGGAGGGAATGGAACGGCGACAG
GGTCGGGGAGTGATGCAACGGGGACCTCGGGGGCGGGAAGGTTAGGTGTT
GAGGGGGTTTGGGGGGTGGTTGTGGGGATGGGGTTGTTGTTACTGATGTG
A
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003452KJC3_003452Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003452-T1.utr5p1KJC3_003452-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_003452-T1.utr5p2KJC3_003452-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003452-T1.exon1KJC3_003452-T1.exon1Aspergillus niger KJC3exon
KJC3_003452-T1.exon2KJC3_003452-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003452-T1.cdsKJC3_003452-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003452-T1KJC3_003452-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1947456..1949285 +
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