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KJC3_003454-T1, KJC3_003454-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003454-T1
Unique NameKJC3_003454-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1952246..1953889-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003454-T1 ID=KJC3_003454-T1|Name=KJC3_003454-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1644bp|location=Sequence derived from alignment at ch3:1952246..1953889- (Aspergillus niger KJC3)
GGGTGGCACCCGGCTGTCATGTCCACCATTCCCCATCTCGGTAACTCGGC
TCTCCCGGGCGGCTGGGCCACTGCAACTCCTCTGCGCGCCGTGTTTCGAG
CTCTCCGCAACCGGGGAGCTCCCCCATATAGTCTTTTTGTAGATACTGGG
TCGCCAATCAGGCTCAATATCAGATTCACGCGTCTGGATTAGCCCGTGTT
CGGAGTGGGGGCATTGCAGTATGACATGTAGAGCTCTTATCAGCTGTGGG
ACTGGTACTGTGCTTAGTCCAGTGTCGATAGAGAGGAGGTAGAGCTAACA
TTTGCCTACTAGGTGGATAGTGAATGCTTGCATTCTTGTGTACCATATAT
TAGGTGTTCCATCACCCTCGCGCCAGTTCTTGATAAACTCACCTTGGTTC
AAAGAGACGACACTTGACTTCCAGTGACTATCGCCACCCTCTACCTCCTC
TCCTCCCAATCTCGTATCTTCTAACTTCTAAGCCCCTCGAGGCTACCATG
TCCCGTCCAAGGGCTGTGCGTGATGATCTCTCGATTGAAGAGGACGCCAA
AGTCAATGTTGACTACCTCGCACATTCCTGGACGTATGATGAGATGTGGG
CTACTAGAAAACATGTTCGCCAAATAAACCAGCACAGTATTGTCAGATGT
CGCTTCGAAAATGCTCTTTGGAGAGCATGGATGGCTTCAACTCGACAGAC
TATTCGCATGCCAGCGGCTTTTATCTCGTGGTAAGTGCTATCTCGATTCC
CACTTTCCCCGATCGCGATTATCTGACTTGGTGCAGGGACAAAGATAGCG
ACATCACTTGGCTCTATGGCCCACTGAAGTCCAGCAGAAGCCCCAGCCCA
ACACCTAGCGAAGCACCCTCGACTCAAGCCCCCAGGAAGCCTTCTTTGAA
GCGAAAGCCCAGCATTTGGGAGCTTCCAGAAGACCCTTCGACATCGAACG
ACTCTACAGATGGAAAGTCTCTGCTTGGCCGTTTCTGGAACATAACCATC
CACTCAGTCCCTAGTGTAAGCTGAAAGCAGACCACATACTTCCTTCATCA
ATTCTGATTTTTCTTTTCGCACAGATAATCCTCAGCTCCCGCCAAGACTG
GAACAAGCGGAGAAAATGCCGCGTCCGATTCGAAGAAGAGGTGCAGCAAT
GCCAGTACGCTCGTGACGGAAACACAATATCGCAATACAGCTACAACTAC
AACTATCCGTTTTTCTTGGAAGAGGCTGGACTATATGAAAGCCATCAGTG
GCAGCAGACTATTGAACCGTTACCATCAACCTTTCTTAGTGGCTACGAGA
CGCTTCCTCCAGCGGACTCGGGTCAGTTTTATTCGATGTCAAATTTCCTG
GAGGAGCTGGAGTATGTCTTCTCTGTCTTTGTTCATTGGCCTTCTCTACC
GCCTCGAGTTACTTGATTTGTCGAACAGCGCTGATATTTGAGTTGATAGC
GAGGTGATATGAGTATTATTGCGAGATGCTTTGTGGGTAGAGTAGAGAAA
TGGGGTATATTTAGACGGTACTGATGGCTGGAATTGTTGTAACAAGACGG
ACCCCTTACACATATAATTATTACCTGTAATATAATTGCTACTTTACTTG
CTAGTGGGTTATAGCGTTATTTTGCAGTCTCTTTTCTGTTCATG
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Coding sequence (CDS) from alignment at ch3:1952246..1953889-

>KJC3_003454-T1 ID=KJC3_003454-T1|Name=KJC3_003454-T1|organism=Aspergillus niger KJC3|type=CDS|length=3048bp|location=Sequence derived from alignment at ch3:1952246..1953889- (Aspergillus niger KJC3)
CGAGGTGATATGAATAATCCTCAGCTCCCGCCAAGACTGGAACAAGCGGA
GAAAATGCCGCGTCCGATTCGAAGAAGAGGTGCAGCAATGCCAGTACGCT
CGTGACGGAAACACAATATCGCAATACAGCTACAACTACAACTATCCGTT
TTTCTTGGAAGAGGCTGGACTATATGAAAGCCATCAGTGGCAGCAGACTA
TTGAACCGTTACCATCAACCTTTCTTAGTGGCTACGAGACGCTTCCTCCA
GCGGACTCGGGTCAGTTTTATTCGATGTCAAATTTCCTGGAGGAGCTGGA
GGACAAAGATAGCGACATCACTTGGCTCTATGGCCCACTGAAGTCCAGCA
GAAGCCCCAGCCCAACACCTAGCGAAGCACCCTCGACTCAAGCCCCCAGG
AAGCCTTCTTTGAAGCGAAAGCCCAGCATTTGGGAGCTTCCAGAAGACCC
TTCGACATCGAACGACTCTACAGATGGAAAGTCTCTGCTTGGCCGTTTCT
GGAACATAACCATCCACTCAGTCCCTAGTATGTCCCGTCCAAGGGCTGTG
CGTGATGATCTCTCGATTGAAGAGGACGCCAAAGTCAATGTTGACTACCT
CGCACATTCCTGGACGTATGATGAGATGTGGGCTACTAGAAAACATGTTC
GCCAAATAAACCAGCACAGTATTGTCAGATGTCGCTTCGAAAATGCTCTT
TGGAGAGCATGGATGGCTTCAACTCGACAGACTATTCGCATGCCAGCGGC
TTTTATCTCGTGCGAGGTGATATGAATAATCCTCAGCTCCCGCCAAGACT
GGAACAAGCGGAGAAAATGCCGCGTCCGATTCGAAGAAGAGGTGCAGCAA
TGCCAGTACGCTCGTGACGGAAACACAATATCGCAATACAGCTACAACTA
CAACTATCCGTTTTTCTTGGAAGAGGCTGGACTATATGAAAGCCATCAGT
GGCAGCAGACTATTGAACCGTTACCATCAACCTTTCTTAGTGGCTACGAG
ACGCTTCCTCCAGCGGACTCGGGTCAGTTTTATTCGATGTCAAATTTCCT
GGAGGAGCTGGAGGACAAAGATAGCGACATCACTTGGCTCTATGGCCCAC
TGAAGTCCAGCAGAAGCCCCAGCCCAACACCTAGCGAAGCACCCTCGACT
CAAGCCCCCAGGAAGCCTTCTTTGAAGCGAAAGCCCAGCATTTGGGAGCT
TCCAGAAGACCCTTCGACATCGAACGACTCTACAGATGGAAAGTCTCTGC
TTGGCCGTTTCTGGAACATAACCATCCACTCAGTCCCTAGTATGTCCCGT
CCAAGGGCTGTGCGTGATGATCTCTCGATTGAAGAGGACGCCAAAGTCAA
TGTTGACTACCTCGCACATTCCTGGACGTATGATGAGATGTGGGCTACTA
GAAAACATGTTCGCCAAATAAACCAGCACAGTATTGTCAGATGTCGCTTC
GAAAATGCTCTTTGGAGAGCATGGATGGCTTCAACTCGACAGACTATTCG
CATGCCAGCGGCTTTTATCTCGTGCGAGGTGATATGAATAATCCTCAGCT
CCCGCCAAGACTGGAACAAGCGGAGAAAATGCCGCGTCCGATTCGAAGAA
GAGGTGCAGCAATGCCAGTACGCTCGTGACGGAAACACAATATCGCAATA
CAGCTACAACTACAACTATCCGTTTTTCTTGGAAGAGGCTGGACTATATG
AAAGCCATCAGTGGCAGCAGACTATTGAACCGTTACCATCAACCTTTCTT
AGTGGCTACGAGACGCTTCCTCCAGCGGACTCGGGTCAGTTTTATTCGAT
GTCAAATTTCCTGGAGGAGCTGGAGGACAAAGATAGCGACATCACTTGGC
TCTATGGCCCACTGAAGTCCAGCAGAAGCCCCAGCCCAACACCTAGCGAA
GCACCCTCGACTCAAGCCCCCAGGAAGCCTTCTTTGAAGCGAAAGCCCAG
CATTTGGGAGCTTCCAGAAGACCCTTCGACATCGAACGACTCTACAGATG
GAAAGTCTCTGCTTGGCCGTTTCTGGAACATAACCATCCACTCAGTCCCT
AGTATGTCCCGTCCAAGGGCTGTGCGTGATGATCTCTCGATTGAAGAGGA
CGCCAAAGTCAATGTTGACTACCTCGCACATTCCTGGACGTATGATGAGA
TGTGGGCTACTAGAAAACATGTTCGCCAAATAAACCAGCACAGTATTGTC
AGATGTCGCTTCGAAAATGCTCTTTGGAGAGCATGGATGGCTTCAACTCG
ACAGACTATTCGCATGCCAGCGGCTTTTATCTCGTGCGAGGTGATATGAA
TAATCCTCAGCTCCCGCCAAGACTGGAACAAGCGGAGAAAATGCCGCGTC
CGATTCGAAGAAGAGGTGCAGCAATGCCAGTACGCTCGTGACGGAAACAC
AATATCGCAATACAGCTACAACTACAACTATCCGTTTTTCTTGGAAGAGG
CTGGACTATATGAAAGCCATCAGTGGCAGCAGACTATTGAACCGTTACCA
TCAACCTTTCTTAGTGGCTACGAGACGCTTCCTCCAGCGGACTCGGGTCA
GTTTTATTCGATGTCAAATTTCCTGGAGGAGCTGGAGGACAAAGATAGCG
ACATCACTTGGCTCTATGGCCCACTGAAGTCCAGCAGAAGCCCCAGCCCA
ACACCTAGCGAAGCACCCTCGACTCAAGCCCCCAGGAAGCCTTCTTTGAA
GCGAAAGCCCAGCATTTGGGAGCTTCCAGAAGACCCTTCGACATCGAACG
ACTCTACAGATGGAAAGTCTCTGCTTGGCCGTTTCTGGAACATAACCATC
CACTCAGTCCCTAGTATGTCCCGTCCAAGGGCTGTGCGTGATGATCTCTC
GATTGAAGAGGACGCCAAAGTCAATGTTGACTACCTCGCACATTCCTGGA
CGTATGATGAGATGTGGGCTACTAGAAAACATGTTCGCCAAATAAACCAG
CACAGTATTGTCAGATGTCGCTTCGAAAATGCTCTTTGGAGAGCATGGAT
GGCTTCAACTCGACAGACTATTCGCATGCCAGCGGCTTTTATCTCGTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003454KJC3_003454Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003454-T1KJC3_003454-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003454-T1.cdsKJC3_003454-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003454-T1.utr3p1KJC3_003454-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003454-T1.exon5KJC3_003454-T1.exon5Aspergillus niger KJC3exon
KJC3_003454-T1.exon4KJC3_003454-T1.exon4Aspergillus niger KJC3exon
KJC3_003454-T1.exon3KJC3_003454-T1.exon3Aspergillus niger KJC3exon
KJC3_003454-T1.exon2KJC3_003454-T1.exon2Aspergillus niger KJC3exon
KJC3_003454-T1.exon1KJC3_003454-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003454-T1.utr5p2KJC3_003454-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_003454-T1.utr5p1KJC3_003454-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1952246..1953889 -
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