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KJC3_003464-T1, KJC3_003464-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003464-T1
Unique NameKJC3_003464-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1969319..1971447-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003464-T1 ID=KJC3_003464-T1|Name=KJC3_003464-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2129bp|location=Sequence derived from alignment at ch3:1969319..1971447- (Aspergillus niger KJC3)
AAGTCATCGCTGCCATTCCAACATTCCTTCTCTCGTTGAGTCTCTCGGCC
AATTTCTTTTGTGCTGCTAATATGTTTTCTAAGCATCATTCAGCTGATTG
ACCTCACGGATGATGCTGGCAATATGCGTGCTCCTCCCTCCACCCATGTG
AGGGATGCGGTAATTGGTCCCTTGAGATCGCGGCGGGGTTGCAAAACCTG
CAAGTAGGTGCTTCATATCCATATCTCTGCGGCGCAAGCTTATAAGTATC
ATCTCAAGGGTCCGGAGAGTCAAGTGTGGACAGGAAAAGCCAAGCTGTCT
TCGATGCAGCAAGACAGGCCGTAAATGCGAGTATGAAGGCCCAAATTTAG
GCACGTTTTCCTCCACACCTGCGACTCTTTCAATTCTCGACAAGCCCCTA
TCATCGGCACCGGATACAGTCTGGAAGGAGCGTCGCGCATTTGCCTACTA
CTTCCAACATATTGCCCTGTTTATCGGCGGGGGTCTGGAAGTTGACTTCT
GGAGTACCATCGTTCCGCAGATTTGCCGCAGCGAACCCGCTGTGTGGGAT
GCCATCATCTCCCTGAGTACCCTGTTCGAAAGCCCGGAGCCATGTCCAGA
CATAGCTTTTCTACGCCAGAGAGATGTCCTTCTCCTCAACCAGTACCACC
GAGACGCCATCAGCTGGTATTCCCGCTCAATGTCCCAAGTCCGTCAGCGA
CTAGAGCGCGGTGACGGGGATGTCTTGGTCGGACTGGTAAGCTGTATACT
CTTTATGTGCATTGAAGGTTTCCAGGGTGGTGCGGCACAAGCTACTCGGC
TTTACTGTCAAGGCGTGCAACTCATTGTCACCTTGCGTGGTCAGATCGCT
TCCGGGGTCGTATCGTCATCGAAAGCTGCATGGTTGGAGGATATTATCGT
TCCGATATTTATCCGTCTCGGGGCGACAGCGCTCAACTTCTCCACTGTTC
CAGTCGGCGCTTTACTACCCGATGTTCAGCATGTATTAACACAGGGGTTT
ACTTCCCTCAAATCGGCTCGCGAGGCAATTGTTCTCTTACTCACAGAGAC
TCAGCTTTTTCAGCGTGTTTGCCTACCACATTTGCTGAAGTCCGATGGCT
TCCAGCCACCTCCTGAGCTAGTCAATCAACGACTCGCTCTATTTGGTAGA
CTAAAGGTGTGGCACGCTGCGTTCACGGACTTGATGGAAACCTTGCGCAT
GAAAGGGGCTTTATCACCGCAGCAAATGAGCACTGGCGCCCTTCTTCTCG
CTTATCACGAGATGCTATACGTAATGATCGGAACGTCCACATGTCAGTTG
GAGACCGCAAACGACGCATACCTTCTGCAATTCCAGAACATAGTGGATCA
GTCTAAGTTCGCGCTAGGTGCGTCGGCTCGATCAGACGGTTCCCAACCTC
CACTCACGCTTGAACTCGGTATCTCAATACCCCTGTGGTTCACTAGTCTA
AAATGCCGAGAACCCAAGCTTCGACAAACAGCACTAAGCCTAGCAGGTCA
AGCACCTGCAGTGCAGGCGTTCTATAAAGTGAATACTGGGGCAAGGTGGT
CGCACACAATAATAACAATCGAAGAAGTGTGTGCGGTAGCTATGAAGTCA
ACTGAAGGACTACCGGAGTCGACGAATCAACTCCAATACTCACATTGTGA
AGACTCTGATATTAGCATATTCGGTTCAGATCTTGGAAGTCAACCCAGCA
CTCCAGGACTGGAATTTGTGCCAAGCCCATATTCGGTGGATTCGGATGTG
GATGCCGGGACAGCAGTCACAGAACTCGTCCCTGAAGAGGCACGCATCAG
ACCCATAAACCTCTTCCGCGTCCAAGACGGCTTCCCTCCGGGAACAACAG
ATGAAGAGATCGCAAGGTGGAGTCCTTACCGTGAACAAAGCTTTCTGCAT
TATTTGCGAAATGAGCGTGATCCAATCAGTGGTGCTTGGAAGATAGCCCA
TGGATTTACTCCAATCGATTATTGAGATGATAATAGAGAGTCCATATACC
CAGTTTAGATGCTTGAGGATAGTCATATACTTCCTGCGATAATCAAGTGG
ATCAATTACTTGTGTCCTCGGGATTTCCCCACAACCCGTCACTCAAATGA
CTGCACACTTGATCAAAATCTGAAGAGGC
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Coding sequence (CDS) from alignment at ch3:1969319..1971447-

>KJC3_003464-T1 ID=KJC3_003464-T1|Name=KJC3_003464-T1|organism=Aspergillus niger KJC3|type=CDS|length=3594bp|location=Sequence derived from alignment at ch3:1969319..1971447- (Aspergillus niger KJC3)
GGTCCGGAGAGTCAAGTGTGGACAGGAAAAGCCAAGCTGTCTTCGATGCA
GCAAGACAGGCCGTAAATGCGAGTATGAAGGCCCAAATTTAGGCACGTTT
TCCTCCACACCTGCGACTCTTTCAATTCTCGACAAGCCCCTATCATCGGC
ACCGGATACAGTCTGGAAGGAGCGTCGCGCATTTGCCTACTACTTCCAAC
ATATTGCCCTGTTTATCGGCGGGGGTCTGGAAGTTGACTTCTGGAGTACC
ATCGTTCCGCAGATTTGCCGCAGCGAACCCGCTGTGTGGGATGCCATCAT
CTCCCTGAGTACCCTGTTCGAAAGCCCGGAGCCATGTCCAGACATAGCTT
TTCTACGCCAGAGAGATGTCCTTCTCCTCAACCAGTACCACCGAGACGCC
ATCAGCTGGTATTCCCGCTCAATGTCCCAAGTCCGTCAGCGACTAGAGCG
CGGTGACGGGGATGTCTTGGTCGGACTGGTAAGCTGTATACTCTTTATGT
GCATTGAAGGTTTCCAGGGTGGTGCGGCACAAGCTACTCGGCTTTACTGT
CAAGGCGTGCAACTCATTGTCACCTTGCGTGGTCAGATCGCTTCCGGGGT
CGTATCGTCATCGAAAGCTGCATGGTTGGAGGATATTATCGTTCCGATAT
TTATCCGTCTCGGGGCGACAGCGCTCAACTTCTCCACTGTTCCAGTCGGC
GCTTTACTACCCGATGTTCAGCATGTATTAACACAGGGGTTTACTTCCCT
CAAATCGGCTCGCGAGGCAATTGTTCTCTTACTCACAGAGACTCAGCTTT
TTCAGCGTGTTTGCCTACCACATTTGCTGAAGTCCGATGGCTTCCAGCCA
CCTCCTGAGCTAGTCAATCAACGACTCGCTCTATTTGGTAGACTAAAGGT
GTGGCACGCTGCGTTCACGGACTTGATGGAAACCTTGCGCATGAAAGGGG
CTTTATCACCGCAGCAAATGAGCACTGGCGCCCTTCTTCTCGCTTATCAC
GAGATGCTATACGTAATGATCGGAACGTCCACATGTCAGTTGGAGACCGC
AAACGACGCATACCTTCTGCAATTCCAGAACATAGTGGATCAGTCTAAGT
TCGCGCTAGGTGCGTCGGCTCGATCAGACGGTTCCCAACCTCCACTCACG
CTTGAACTCGGTATCTCAATACCCCTGTGGTTCACTAGTCTAAAATGCCG
AGAACCCAAGCTTCGACAAACAGCACTAAGCCTAGCAGGTCAAGCACCTG
CAGTGCAGGCGTTCTATAAAGTGAATACTGGGGCAAGGTGGTCGCACACA
ATAATAACAATCGAAGAAGTGTGTGCGGTAGCTATGAAGTCAACTGAAGG
ACTACCGGAGTCGACGAATCAACTCCAATACTCACATTGTGAAGACTCTG
ATATTAGCATATTCGGTTCAGATCTTGGAAGTCAACCCAGCACTCCAGGA
CTGGAATTTGTGCCAAGCCCATATTCGGTGGATTCGGATGTGGATGCCGG
GACAGCAGTCACAGAACTCGTCCCTGAAGAGGCACGCATCAGACCCATAA
ACCTCTTCCGCGTCCAAGACGGCTTCCCTCCGGGAACAACAGATGAAGAG
ATCGCAAGGTGGAGTCCTTACCGTGAACAAAGCTTTCTGCATTATTTGCG
AAATGAGCGTGATCCAATCAGTGGTGCTTGGAAGATAGCCCATGGATTTA
CTCCAATCGATTATTGAATGCGTGCTCCTCCCTCCACCCATGTGAGGGAT
GCGGTAATTGGTCCCTTGAGATCGCGGCGGGGTTGCAAAACCTGCAAGGT
CCGGAGAGTCAAGTGTGGACAGGAAAAGCCAAGCTGTCTTCGATGCAGCA
AGACAGGCCGTAAATGCGAGTATGAAGGCCCAAATTTAGGCACGTTTTCC
TCCACACCTGCGACTCTTTCAATTCTCGACAAGCCCCTATCATCGGCACC
GGATACAGTCTGGAAGGAGCGTCGCGCATTTGCCTACTACTTCCAACATA
TTGCCCTGTTTATCGGCGGGGGTCTGGAAGTTGACTTCTGGAGTACCATC
GTTCCGCAGATTTGCCGCAGCGAACCCGCTGTGTGGGATGCCATCATCTC
CCTGAGTACCCTGTTCGAAAGCCCGGAGCCATGTCCAGACATAGCTTTTC
TACGCCAGAGAGATGTCCTTCTCCTCAACCAGTACCACCGAGACGCCATC
AGCTGGTATTCCCGCTCAATGTCCCAAGTCCGTCAGCGACTAGAGCGCGG
TGACGGGGATGTCTTGGTCGGACTGGTAAGCTGTATACTCTTTATGTGCA
TTGAAGGTTTCCAGGGTGGTGCGGCACAAGCTACTCGGCTTTACTGTCAA
GGCGTGCAACTCATTGTCACCTTGCGTGGTCAGATCGCTTCCGGGGTCGT
ATCGTCATCGAAAGCTGCATGGTTGGAGGATATTATCGTTCCGATATTTA
TCCGTCTCGGGGCGACAGCGCTCAACTTCTCCACTGTTCCAGTCGGCGCT
TTACTACCCGATGTTCAGCATGTATTAACACAGGGGTTTACTTCCCTCAA
ATCGGCTCGCGAGGCAATTGTTCTCTTACTCACAGAGACTCAGCTTTTTC
AGCGTGTTTGCCTACCACATTTGCTGAAGTCCGATGGCTTCCAGCCACCT
CCTGAGCTAGTCAATCAACGACTCGCTCTATTTGGTAGACTAAAGGTGTG
GCACGCTGCGTTCACGGACTTGATGGAAACCTTGCGCATGAAAGGGGCTT
TATCACCGCAGCAAATGAGCACTGGCGCCCTTCTTCTCGCTTATCACGAG
ATGCTATACGTAATGATCGGAACGTCCACATGTCAGTTGGAGACCGCAAA
CGACGCATACCTTCTGCAATTCCAGAACATAGTGGATCAGTCTAAGTTCG
CGCTAGGTGCGTCGGCTCGATCAGACGGTTCCCAACCTCCACTCACGCTT
GAACTCGGTATCTCAATACCCCTGTGGTTCACTAGTCTAAAATGCCGAGA
ACCCAAGCTTCGACAAACAGCACTAAGCCTAGCAGGTCAAGCACCTGCAG
TGCAGGCGTTCTATAAAGTGAATACTGGGGCAAGGTGGTCGCACACAATA
ATAACAATCGAAGAAGTGTGTGCGGTAGCTATGAAGTCAACTGAAGGACT
ACCGGAGTCGACGAATCAACTCCAATACTCACATTGTGAAGACTCTGATA
TTAGCATATTCGGTTCAGATCTTGGAAGTCAACCCAGCACTCCAGGACTG
GAATTTGTGCCAAGCCCATATTCGGTGGATTCGGATGTGGATGCCGGGAC
AGCAGTCACAGAACTCGTCCCTGAAGAGGCACGCATCAGACCCATAAACC
TCTTCCGCGTCCAAGACGGCTTCCCTCCGGGAACAACAGATGAAGAGATC
GCAAGGTGGAGTCCTTACCGTGAACAAAGCTTTCTGCATTATTTGCGAAA
TGAGCGTGATCCAATCAGTGGTGCTTGGAAGATAGCCCATGGATTTACTC
CAATCGATTATTGAATGCGTGCTCCTCCCTCCACCCATGTGAGGGATGCG
GTAATTGGTCCCTTGAGATCGCGGCGGGGTTGCAAAACCTGCAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003464KJC3_003464Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003464-T1KJC3_003464-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003464-T1.cdsKJC3_003464-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003464-T1.utr3p1KJC3_003464-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003464-T1.exon2KJC3_003464-T1.exon2Aspergillus niger KJC3exon
KJC3_003464-T1.exon1KJC3_003464-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003464-T1.utr5p1KJC3_003464-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1969319..1971447 -
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