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KJC3_003469-T1, KJC3_003469-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003469-T1
Unique NameKJC3_003469-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1986818..1988087-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003469-T1 ID=KJC3_003469-T1|Name=KJC3_003469-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1270bp|location=Sequence derived from alignment at ch3:1986818..1988087- (Aspergillus niger KJC3)
TCTCGAATTCTCATCTTATAAGGAAAATTATGGGCGGAATATCGCTCCTT
CATTCTCATCAATTTCATCCCCCATTATTTGGAAATATCATCAATAATGG
CCGTTATTTGGGGGTTAGATCTCCATGAAATGCAATGGAGCAAATTCAAG
AGCTCATACATGTTCAACCGGGTGTATCATCTGCGTCGCACGAAGATGAT
CGTCTATCAGCTCGCTATGATTTTCTGTGTATGTTCGGAGTCGGTTGGAA
CAGCGGCGCTGTCTGGTTAGCATCACCTTCTTTCACTCAGCACACTACCG
TACTATTTCGCAAGTGCTAATGGCCTGTGTCAATCAATAGACTACCTCGA
CCAACAAGACGACATCCAAAATCATCATCCCGGAATTTACGTCTACAACA
ACGACTTCATCGGCGCCGCATCATACAACATCTTCGTCGGAATCGCCGTC
GCATTCATATTCGGAGGAGCGTTCTTCTTCGATTTATTCTGGCCGGAACG
TCACGAGAGTCGCTCTGTCCGGTTGGCGTGGAAGATTTGTGCCGTAATTG
TGTCGGTGATGATGCTGAGTTCGGCCCTGACCATGACGGTATGATAGCTG
GAGACGTGTTTTGGGATGAATGCATGACTGACAATGGGAATAGATCATCA
CAGCGACAGGAAGTGCTCGCATCGATGGAACGGATGCGTCAACGGCGCGG
AAGTTTTGGGAAGAATCGATGAAGAAGCCTGCTTTGAGTATGTCTCTCTT
GGATAACATCGCACAGTGCTGCTTTATGCTAATATGGTGGAACAGAATAT
CATACCAACCCAAGGGCGATCGCATCCGCTGTTCTGGCTTGGCCGGGGTG
GGTATTTACAACAGTCAGGTATGCTACGTCTTATTTCATTGATGCCAAGC
GAATGCTAATCTGCTACAGTACCGTTATTCTCTTCCTGTCGCAGCGCCAC
GATGATCAGTATGGGCCCAAGTCAGCCTACGGTCGGCAACTGGGCAGTGC
TGCGGATACAGGGGAGAGTACAACTACGGAGGATAAAGTCGTCAATGGTG
TATAACTTGTTCTTATTCTGACGATAATAATGGGAGTGGATGATGAATAC
CTGGATCCCTGATGACTGTATATACCATTGTACTTTTATGCGATGTAATG
ATCTTTTTGTATTGTGATAGCGATAGACGGCGCGAAAGGTGACTGGGCTC
TGATTGATTATGTATAATATTATGATTTTGACTGGTGACTTATCGATTAC
AATGATTACCTTCACAGCTG
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Coding sequence (CDS) from alignment at ch3:1986818..1988087-

>KJC3_003469-T1 ID=KJC3_003469-T1|Name=KJC3_003469-T1|organism=Aspergillus niger KJC3|type=CDS|length=3600bp|location=Sequence derived from alignment at ch3:1986818..1988087- (Aspergillus niger KJC3)
TACCGTTATTCTCTTCCTGTCGCAGCGCCACGATGATCAGTATGGGCCCA
AGTCAGCCTACGGTCGGCAACTGGGCAGTGCTGCGGATACAGGGGAGAGT
ACAACTACGGAGGATAAAGTCGTCAATGGTGTATAAAATATCATACCAAC
CCAAGGGCGATCGCATCCGCTGTTCTGGCTTGGCCGGGGTGGGTATTTAC
AACAGTCAGATCATCACAGCGACAGGAAGTGCTCGCATCGATGGAACGGA
TGCGTCAACGGCGCGGAAGTTTTGGGAAGAATCGATGAAGAAGCCTGCTT
TGAACTACCTCGACCAACAAGACGACATCCAAAATCATCATCCCGGAATT
TACGTCTACAACAACGACTTCATCGGCGCCGCATCATACAACATCTTCGT
CGGAATCGCCGTCGCATTCATATTCGGAGGAGCGTTCTTCTTCGATTTAT
TCTGGCCGGAACGTCACGAGAGTCGCTCTGTCCGGTTGGCGTGGAAGATT
TGTGCCGTAATTGTGTCGGTGATGATGCTGAGTTCGGCCCTGACCATGAC
GATGGCCGTTATTTGGGGGTTAGATCTCCATGAAATGCAATGGAGCAAAT
TCAAGAGCTCATACATGTTCAACCGGGTGTATCATCTGCGTCGCACGAAG
ATGATCGTCTATCAGCTCGCTATGATTTTCTGTGTATGTTCGGAGTCGGT
TGGAACAGCGGCGCTGTCTGTACCGTTATTCTCTTCCTGTCGCAGCGCCA
CGATGATCAGTATGGGCCCAAGTCAGCCTACGGTCGGCAACTGGGCAGTG
CTGCGGATACAGGGGAGAGTACAACTACGGAGGATAAAGTCGTCAATGGT
GTATAAAATATCATACCAACCCAAGGGCGATCGCATCCGCTGTTCTGGCT
TGGCCGGGGTGGGTATTTACAACAGTCAGATCATCACAGCGACAGGAAGT
GCTCGCATCGATGGAACGGATGCGTCAACGGCGCGGAAGTTTTGGGAAGA
ATCGATGAAGAAGCCTGCTTTGAACTACCTCGACCAACAAGACGACATCC
AAAATCATCATCCCGGAATTTACGTCTACAACAACGACTTCATCGGCGCC
GCATCATACAACATCTTCGTCGGAATCGCCGTCGCATTCATATTCGGAGG
AGCGTTCTTCTTCGATTTATTCTGGCCGGAACGTCACGAGAGTCGCTCTG
TCCGGTTGGCGTGGAAGATTTGTGCCGTAATTGTGTCGGTGATGATGCTG
AGTTCGGCCCTGACCATGACGATGGCCGTTATTTGGGGGTTAGATCTCCA
TGAAATGCAATGGAGCAAATTCAAGAGCTCATACATGTTCAACCGGGTGT
ATCATCTGCGTCGCACGAAGATGATCGTCTATCAGCTCGCTATGATTTTC
TGTGTATGTTCGGAGTCGGTTGGAACAGCGGCGCTGTCTGTACCGTTATT
CTCTTCCTGTCGCAGCGCCACGATGATCAGTATGGGCCCAAGTCAGCCTA
CGGTCGGCAACTGGGCAGTGCTGCGGATACAGGGGAGAGTACAACTACGG
AGGATAAAGTCGTCAATGGTGTATAAAATATCATACCAACCCAAGGGCGA
TCGCATCCGCTGTTCTGGCTTGGCCGGGGTGGGTATTTACAACAGTCAGA
TCATCACAGCGACAGGAAGTGCTCGCATCGATGGAACGGATGCGTCAACG
GCGCGGAAGTTTTGGGAAGAATCGATGAAGAAGCCTGCTTTGAACTACCT
CGACCAACAAGACGACATCCAAAATCATCATCCCGGAATTTACGTCTACA
ACAACGACTTCATCGGCGCCGCATCATACAACATCTTCGTCGGAATCGCC
GTCGCATTCATATTCGGAGGAGCGTTCTTCTTCGATTTATTCTGGCCGGA
ACGTCACGAGAGTCGCTCTGTCCGGTTGGCGTGGAAGATTTGTGCCGTAA
TTGTGTCGGTGATGATGCTGAGTTCGGCCCTGACCATGACGATGGCCGTT
ATTTGGGGGTTAGATCTCCATGAAATGCAATGGAGCAAATTCAAGAGCTC
ATACATGTTCAACCGGGTGTATCATCTGCGTCGCACGAAGATGATCGTCT
ATCAGCTCGCTATGATTTTCTGTGTATGTTCGGAGTCGGTTGGAACAGCG
GCGCTGTCTGTACCGTTATTCTCTTCCTGTCGCAGCGCCACGATGATCAG
TATGGGCCCAAGTCAGCCTACGGTCGGCAACTGGGCAGTGCTGCGGATAC
AGGGGAGAGTACAACTACGGAGGATAAAGTCGTCAATGGTGTATAAAATA
TCATACCAACCCAAGGGCGATCGCATCCGCTGTTCTGGCTTGGCCGGGGT
GGGTATTTACAACAGTCAGATCATCACAGCGACAGGAAGTGCTCGCATCG
ATGGAACGGATGCGTCAACGGCGCGGAAGTTTTGGGAAGAATCGATGAAG
AAGCCTGCTTTGAACTACCTCGACCAACAAGACGACATCCAAAATCATCA
TCCCGGAATTTACGTCTACAACAACGACTTCATCGGCGCCGCATCATACA
ACATCTTCGTCGGAATCGCCGTCGCATTCATATTCGGAGGAGCGTTCTTC
TTCGATTTATTCTGGCCGGAACGTCACGAGAGTCGCTCTGTCCGGTTGGC
GTGGAAGATTTGTGCCGTAATTGTGTCGGTGATGATGCTGAGTTCGGCCC
TGACCATGACGATGGCCGTTATTTGGGGGTTAGATCTCCATGAAATGCAA
TGGAGCAAATTCAAGAGCTCATACATGTTCAACCGGGTGTATCATCTGCG
TCGCACGAAGATGATCGTCTATCAGCTCGCTATGATTTTCTGTGTATGTT
CGGAGTCGGTTGGAACAGCGGCGCTGTCTGTACCGTTATTCTCTTCCTGT
CGCAGCGCCACGATGATCAGTATGGGCCCAAGTCAGCCTACGGTCGGCAA
CTGGGCAGTGCTGCGGATACAGGGGAGAGTACAACTACGGAGGATAAAGT
CGTCAATGGTGTATAAAATATCATACCAACCCAAGGGCGATCGCATCCGC
TGTTCTGGCTTGGCCGGGGTGGGTATTTACAACAGTCAGATCATCACAGC
GACAGGAAGTGCTCGCATCGATGGAACGGATGCGTCAACGGCGCGGAAGT
TTTGGGAAGAATCGATGAAGAAGCCTGCTTTGAACTACCTCGACCAACAA
GACGACATCCAAAATCATCATCCCGGAATTTACGTCTACAACAACGACTT
CATCGGCGCCGCATCATACAACATCTTCGTCGGAATCGCCGTCGCATTCA
TATTCGGAGGAGCGTTCTTCTTCGATTTATTCTGGCCGGAACGTCACGAG
AGTCGCTCTGTCCGGTTGGCGTGGAAGATTTGTGCCGTAATTGTGTCGGT
GATGATGCTGAGTTCGGCCCTGACCATGACGATGGCCGTTATTTGGGGGT
TAGATCTCCATGAAATGCAATGGAGCAAATTCAAGAGCTCATACATGTTC
AACCGGGTGTATCATCTGCGTCGCACGAAGATGATCGTCTATCAGCTCGC
TATGATTTTCTGTGTATGTTCGGAGTCGGTTGGAACAGCGGCGCTGTCTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003469KJC3_003469Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003469-T1KJC3_003469-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003469-T1.cdsKJC3_003469-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003469-T1.utr3p1KJC3_003469-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003469-T1.exon5KJC3_003469-T1.exon5Aspergillus niger KJC3exon
KJC3_003469-T1.exon4KJC3_003469-T1.exon4Aspergillus niger KJC3exon
KJC3_003469-T1.exon3KJC3_003469-T1.exon3Aspergillus niger KJC3exon
KJC3_003469-T1.exon2KJC3_003469-T1.exon2Aspergillus niger KJC3exon
KJC3_003469-T1.exon1KJC3_003469-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003469-T1.utr5p1KJC3_003469-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1986818..1988087 -
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