You are here

Home

KJC3_003472-T1, KJC3_003472-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003472-T1
Unique NameKJC3_003472-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1993682..1996265-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003472-T1 ID=KJC3_003472-T1|Name=KJC3_003472-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2584bp|location=Sequence derived from alignment at ch3:1993682..1996265- (Aspergillus niger KJC3)
ATGCAGCAGCTTGCTGTTCGCGTCACTCATAGGTGCCCAAAGGCGCGTAT
AAACATTCGACCATTACAACTCAGTTATTGCTGACAGAAGTGATAGGGAG
GCTGTCGTGCCCCCCACCCGATATGAAATTGGTTCTGGATTTACGAACTA
CACCGGTTATGGGAATGCATCCTGCTTCACACTTGACCAGAAGAGCCCAT
TAGTTACCCTAGACTACGGTACCGAGGTTGGAGGCTTCCCCTTATTCCAT
GTGGACTTTCTGTCAACTGCAGTCCAGCTCGAGGCCAAATACACTGAATC
CAAAACTGGTCTTGATGAGCCGTTTGGTGATGGGCCATGGACCTTTTCCA
ATGGCCTTTCCAACACCTTCCGTGTCGAAACTTTCAATGTCAACTCTCCT
GGGACGGTGGAGTCGTTCTTCATTCAAGGGGGTCTTCGCTGGCAGAACCT
CAAGCTTCTCACGGAAGGCAGTGTCCGCATATGCCAAGCGGGTATCAGAT
CTCAAAATGATCGCACTGCGGTGGACAAGCTGCCTGGATACTTCGAAAGC
TCGAATAATCTGTATAATGAAATCTGGGCCTTGGGGCCACGTACAGTCCA
GCAAGCATGCATTGCTGCAGATACCGCACCGTCGACATGGGAAGTCACTG
GAGACGGAGTGTATCTTCGTGGACAGCAGCCTGCCCAATCGGTGGCAGGA
GCCTCCTTTAGCAACTACACCATGACCTTCCAGACCAATATTGTCCGTGG
AGGAACAGGATGGAAGGTTGCCACGGGTGTGGGTGGCTTTGGTCCTTACT
TTGTTCTTACCAGTGAATATCCTGTTGGCTCGACGTTTGTCAATACAAAC
CGAACCATTGTCCCCCCAAACTCACTAGCTGTGGGTTACGGGTGGAACTT
GGTGAATCAGACCTCGCTCACCACCGGAAAAGTGAACCATTATTCCTTGC
CTTTCAACATCAAGGAAGGGCAGTGGTATGAGATTTCAACCTCCATTAAT
GCGACCGGATACGGCGTTACTATCAATGGAACTGAAATATTCGTGGCACT
GGATGACCTGCAAATCGTAGCTGGCACTACTGGCTCCTCTGGCAGTCTGA
CAGGCGGTACCTGGGGTTTTGGGCCATATCAGGACCAAATTGCGCTTGTC
AAGGATGTTACGGTTCATGCGCAGAATGGTACTATGCTGTACCAGAATCC
TATGACGCTCAGCTCCGTCCTCGAAGAATATGGAGTGATGGCTAATAAGC
ACTCCGTCTGTCTGGACGGCGCGAAAAGAGACCGCCTTGTCTGGAGTGGT
GATTTTGTACACACGTATCGCGTCATCCAGTCCAGCACCTATCGCTCGGA
TTTCATAACCGGATCACTAGAATATTGGATTGGCCGTCAGGCACCGGACT
CGTCGCAGTACGCTGGCTATTTCAGCATGTCACCAGCGATGGGCCAGTCG
GCGAAATATGTCGACACGTATGCTTCTTTTGGGCTTCTCGATTACCAGCT
TTTCCTTCTCAACGTATTCGCCGGTCACTACAGAAATTCTGGCGACAAGG
CGTTCGTAACCAAGCATTGGGCGAAGATCAAGAAGGGCGTGGAAGCTATC
CTGCCCTTGATAGATGATCAATCTGGACTGGCGGTCGCTACCGACATCGG
GGCATTCTTCTCTGGATCCGACAATGGTACTGCAGTATCGGCACTTCTTG
CCCACACACTCGACCAGATGGCCGATGTTGCATCCGCAATGAATGAGACA
GATGTCGCGACAACTTGGACTCGCTCGGCGACTTCAGTCAAAGCTGCGAT
CCGCCAACAGCTCTGGAACCACCGCCTTGGATACTACGCTACCGACTTGA
GTGACCCGACCGAGCAGTCTATCACCGGTAGCGCCTGGGCTATTCTGGCG
GGAGTCGCCAACGCCACGCAAGCAGAATCCTCGCTCGCGGCGTTATCATC
ACTCCGGCTTGGTATCGGCTACAAAACGACGAGCTCCGTTGCCAACGCAT
CATCGACTAATCTTGCGCCTTTCCTCACTGGCTTCCTCCTAGAAGCGATT
ATGCAGGAAAGTCGCAATAGCCCCAGTTCAAGCAAAGCGAGGACGACAGC
TATTGGCGTGCTCCTCGACCAGCTCTGGGCTGCGATGGTGACCCAAAATG
AATACTATACTGGCACGACCTGGGAATATCTTTACCCTGATGGCCGACCC
GGGCTTGACTTCTATACGTCGCATGCGCACCCCTGGGCAGCTGCGCCGAC
GTATGTTTTCTCGGAATATGTACTTGGTGTTCAGGCGACTTCGGCTGGGT
TTTCTGAGTGGGAGTTTCGCCCAGCGATGCTGGATGTAAATTTGTCCTGG
GCGCGGGGAAGAGTGCCTACTCCTCAGGGGCCGATCCAAGCTAGTTGGCA
GTTGAATGAAACGAGCGTGCAGTTGAGCGTGTGTGGGCCTAGTGGTACAG
AGGGGGTTGTCAGGGTGCCATTTGCTATTAAATCCTATTCCGTGGATGGG
GAACAACAAACAAATGACAAGGACGGCTTGGAAGTTCAAGTGTCCGGAGG
ATCATGTACTGATATCCATGCTGTGAGAGGGTGA
back to top

Coding sequence (CDS) from alignment at ch3:1993682..1996265-

>KJC3_003472-T1 ID=KJC3_003472-T1|Name=KJC3_003472-T1|organism=Aspergillus niger KJC3|type=CDS|length=5040bp|location=Sequence derived from alignment at ch3:1993682..1996265- (Aspergillus niger KJC3)
GGAGGCTGTCGTGCCCCCCACCCGATATGAAATTGGTTCTGGATTTACGA
ACTACACCGGTTATGGGAATGCATCCTGCTTCACACTTGACCAGAAGAGC
CCATTAGTTACCCTAGACTACGGTACCGAGGTTGGAGGCTTCCCCTTATT
CCATGTGGACTTTCTGTCAACTGCAGTCCAGCTCGAGGCCAAATACACTG
AATCCAAAACTGGTCTTGATGAGCCGTTTGGTGATGGGCCATGGACCTTT
TCCAATGGCCTTTCCAACACCTTCCGTGTCGAAACTTTCAATGTCAACTC
TCCTGGGACGGTGGAGTCGTTCTTCATTCAAGGGGGTCTTCGCTGGCAGA
ACCTCAAGCTTCTCACGGAAGGCAGTGTCCGCATATGCCAAGCGGGTATC
AGATCTCAAAATGATCGCACTGCGGTGGACAAGCTGCCTGGATACTTCGA
AAGCTCGAATAATCTGTATAATGAAATCTGGGCCTTGGGGCCACGTACAG
TCCAGCAAGCATGCATTGCTGCAGATACCGCACCGTCGACATGGGAAGTC
ACTGGAGACGGAGTGTATCTTCGTGGACAGCAGCCTGCCCAATCGGTGGC
AGGAGCCTCCTTTAGCAACTACACCATGACCTTCCAGACCAATATTGTCC
GTGGAGGAACAGGATGGAAGGTTGCCACGGGTGTGGGTGGCTTTGGTCCT
TACTTTGTTCTTACCAGTGAATATCCTGTTGGCTCGACGTTTGTCAATAC
AAACCGAACCATTGTCCCCCCAAACTCACTAGCTGTGGGTTACGGGTGGA
ACTTGGTGAATCAGACCTCGCTCACCACCGGAAAAGTGAACCATTATTCC
TTGCCTTTCAACATCAAGGAAGGGCAGTGGTATGAGATTTCAACCTCCAT
TAATGCGACCGGATACGGCGTTACTATCAATGGAACTGAAATATTCGTGG
CACTGGATGACCTGCAAATCGTAGCTGGCACTACTGGCTCCTCTGGCAGT
CTGACAGGCGGTACCTGGGGTTTTGGGCCATATCAGGACCAAATTGCGCT
TGTCAAGGATGTTACGGTTCATGCGCAGAATGGTACTATGCTGTACCAGA
ATCCTATGACGCTCAGCTCCGTCCTCGAAGAATATGGAGTGATGGCTAAT
AAGCACTCCGTCTGTCTGGACGGCGCGAAAAGAGACCGCCTTGTCTGGAG
TGGTGATTTTGTACACACGTATCGCGTCATCCAGTCCAGCACCTATCGCT
CGGATTTCATAACCGGATCACTAGAATATTGGATTGGCCGTCAGGCACCG
GACTCGTCGCAGTACGCTGGCTATTTCAGCATGTCACCAGCGATGGGCCA
GTCGGCGAAATATGTCGACACGTATGCTTCTTTTGGGCTTCTCGATTACC
AGCTTTTCCTTCTCAACGTATTCGCCGGTCACTACAGAAATTCTGGCGAC
AAGGCGTTCGTAACCAAGCATTGGGCGAAGATCAAGAAGGGCGTGGAAGC
TATCCTGCCCTTGATAGATGATCAATCTGGACTGGCGGTCGCTACCGACA
TCGGGGCATTCTTCTCTGGATCCGACAATGGTACTGCAGTATCGGCACTT
CTTGCCCACACACTCGACCAGATGGCCGATGTTGCATCCGCAATGAATGA
GACAGATGTCGCGACAACTTGGACTCGCTCGGCGACTTCAGTCAAAGCTG
CGATCCGCCAACAGCTCTGGAACCACCGCCTTGGATACTACGCTACCGAC
TTGAGTGACCCGACCGAGCAGTCTATCACCGGTAGCGCCTGGGCTATTCT
GGCGGGAGTCGCCAACGCCACGCAAGCAGAATCCTCGCTCGCGGCGTTAT
CATCACTCCGGCTTGGTATCGGCTACAAAACGACGAGCTCCGTTGCCAAC
GCATCATCGACTAATCTTGCGCCTTTCCTCACTGGCTTCCTCCTAGAAGC
GATTATGCAGGAAAGTCGCAATAGCCCCAGTTCAAGCAAAGCGAGGACGA
CAGCTATTGGCGTGCTCCTCGACCAGCTCTGGGCTGCGATGGTGACCCAA
AATGAATACTATACTGGCACGACCTGGGAATATCTTTACCCTGATGGCCG
ACCCGGGCTTGACTTCTATACGTCGCATGCGCACCCCTGGGCAGCTGCGC
CGACGTATGTTTTCTCGGAATATGTACTTGGTGTTCAGGCGACTTCGGCT
GGGTTTTCTGAGTGGGAGTTTCGCCCAGCGATGCTGGATGTAAATTTGTC
CTGGGCGCGGGGAAGAGTGCCTACTCCTCAGGGGCCGATCCAAGCTAGTT
GGCAGTTGAATGAAACGAGCGTGCAGTTGAGCGTGTGTGGGCCTAGTGGT
ACAGAGGGGGTTGTCAGGGTGCCATTTGCTATTAAATCCTATTCCGTGGA
TGGGGAACAACAAACAAATGACAAGGACGGCTTGGAAGTTCAAGTGTCCG
GAGGATCATGTACTGATATCCATGCTGTGAGAGGGTGAATGCAGCAGCTT
GCTGTTCGCGTCACTCATAGGGAGGCTGTCGTGCCCCCCACCCGATATGA
AATTGGTTCTGGATTTACGAACTACACCGGTTATGGGAATGCATCCTGCT
TCACACTTGACCAGAAGAGCCCATTAGTTACCCTAGACTACGGTACCGAG
GTTGGAGGCTTCCCCTTATTCCATGTGGACTTTCTGTCAACTGCAGTCCA
GCTCGAGGCCAAATACACTGAATCCAAAACTGGTCTTGATGAGCCGTTTG
GTGATGGGCCATGGACCTTTTCCAATGGCCTTTCCAACACCTTCCGTGTC
GAAACTTTCAATGTCAACTCTCCTGGGACGGTGGAGTCGTTCTTCATTCA
AGGGGGTCTTCGCTGGCAGAACCTCAAGCTTCTCACGGAAGGCAGTGTCC
GCATATGCCAAGCGGGTATCAGATCTCAAAATGATCGCACTGCGGTGGAC
AAGCTGCCTGGATACTTCGAAAGCTCGAATAATCTGTATAATGAAATCTG
GGCCTTGGGGCCACGTACAGTCCAGCAAGCATGCATTGCTGCAGATACCG
CACCGTCGACATGGGAAGTCACTGGAGACGGAGTGTATCTTCGTGGACAG
CAGCCTGCCCAATCGGTGGCAGGAGCCTCCTTTAGCAACTACACCATGAC
CTTCCAGACCAATATTGTCCGTGGAGGAACAGGATGGAAGGTTGCCACGG
GTGTGGGTGGCTTTGGTCCTTACTTTGTTCTTACCAGTGAATATCCTGTT
GGCTCGACGTTTGTCAATACAAACCGAACCATTGTCCCCCCAAACTCACT
AGCTGTGGGTTACGGGTGGAACTTGGTGAATCAGACCTCGCTCACCACCG
GAAAAGTGAACCATTATTCCTTGCCTTTCAACATCAAGGAAGGGCAGTGG
TATGAGATTTCAACCTCCATTAATGCGACCGGATACGGCGTTACTATCAA
TGGAACTGAAATATTCGTGGCACTGGATGACCTGCAAATCGTAGCTGGCA
CTACTGGCTCCTCTGGCAGTCTGACAGGCGGTACCTGGGGTTTTGGGCCA
TATCAGGACCAAATTGCGCTTGTCAAGGATGTTACGGTTCATGCGCAGAA
TGGTACTATGCTGTACCAGAATCCTATGACGCTCAGCTCCGTCCTCGAAG
AATATGGAGTGATGGCTAATAAGCACTCCGTCTGTCTGGACGGCGCGAAA
AGAGACCGCCTTGTCTGGAGTGGTGATTTTGTACACACGTATCGCGTCAT
CCAGTCCAGCACCTATCGCTCGGATTTCATAACCGGATCACTAGAATATT
GGATTGGCCGTCAGGCACCGGACTCGTCGCAGTACGCTGGCTATTTCAGC
ATGTCACCAGCGATGGGCCAGTCGGCGAAATATGTCGACACGTATGCTTC
TTTTGGGCTTCTCGATTACCAGCTTTTCCTTCTCAACGTATTCGCCGGTC
ACTACAGAAATTCTGGCGACAAGGCGTTCGTAACCAAGCATTGGGCGAAG
ATCAAGAAGGGCGTGGAAGCTATCCTGCCCTTGATAGATGATCAATCTGG
ACTGGCGGTCGCTACCGACATCGGGGCATTCTTCTCTGGATCCGACAATG
GTACTGCAGTATCGGCACTTCTTGCCCACACACTCGACCAGATGGCCGAT
GTTGCATCCGCAATGAATGAGACAGATGTCGCGACAACTTGGACTCGCTC
GGCGACTTCAGTCAAAGCTGCGATCCGCCAACAGCTCTGGAACCACCGCC
TTGGATACTACGCTACCGACTTGAGTGACCCGACCGAGCAGTCTATCACC
GGTAGCGCCTGGGCTATTCTGGCGGGAGTCGCCAACGCCACGCAAGCAGA
ATCCTCGCTCGCGGCGTTATCATCACTCCGGCTTGGTATCGGCTACAAAA
CGACGAGCTCCGTTGCCAACGCATCATCGACTAATCTTGCGCCTTTCCTC
ACTGGCTTCCTCCTAGAAGCGATTATGCAGGAAAGTCGCAATAGCCCCAG
TTCAAGCAAAGCGAGGACGACAGCTATTGGCGTGCTCCTCGACCAGCTCT
GGGCTGCGATGGTGACCCAAAATGAATACTATACTGGCACGACCTGGGAA
TATCTTTACCCTGATGGCCGACCCGGGCTTGACTTCTATACGTCGCATGC
GCACCCCTGGGCAGCTGCGCCGACGTATGTTTTCTCGGAATATGTACTTG
GTGTTCAGGCGACTTCGGCTGGGTTTTCTGAGTGGGAGTTTCGCCCAGCG
ATGCTGGATGTAAATTTGTCCTGGGCGCGGGGAAGAGTGCCTACTCCTCA
GGGGCCGATCCAAGCTAGTTGGCAGTTGAATGAAACGAGCGTGCAGTTGA
GCGTGTGTGGGCCTAGTGGTACAGAGGGGGTTGTCAGGGTGCCATTTGCT
ATTAAATCCTATTCCGTGGATGGGGAACAACAAACAAATGACAAGGACGG
CTTGGAAGTTCAAGTGTCCGGAGGATCATGTACTGATATCCATGCTGTGA
GAGGGTGAATGCAGCAGCTTGCTGTTCGCGTCACTCATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003472KJC3_003472Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003472-T1KJC3_003472-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003472-T1.cdsKJC3_003472-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003472-T1.exon2KJC3_003472-T1.exon2Aspergillus niger KJC3exon
KJC3_003472-T1.exon1KJC3_003472-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR008928
DBxrefInterPro:IPR035396
DBxrefInterPro:IPR035398
DBxrefInterPro:IPR012341
DBxrefPFAM:PF17390
DBxrefPFAM:PF17389
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1993682..1996265 -
Powered by Drupal