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KJC3_003485-T1, KJC3_003485-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003485-T1
Unique NameKJC3_003485-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2031130..2032806-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003485-T1 ID=KJC3_003485-T1|Name=KJC3_003485-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1677bp|location=Sequence derived from alignment at ch3:2031130..2032806- (Aspergillus niger KJC3)
ATGCGCCGGCTGCGCAAGTCCACTGAGCCGCGGGTGTTTTGGATAGATGC
CATCTGCATCAACCAAAGCAACAACGATGAGAAGTCCAGCCAGGTTTCAT
TCATGGGTGAGATCTACCAAGGGTCGCAGGAAACAACACTCTGGCTTGGA
GAAGACCCTTACACTGTGGAGGTGGGCTCCAAGTCTGCTGCTGGTCACCG
ATTAGCCGAATTGTTCGAGATCCTCCTCAGCGACAAGCACATGTCGGAAC
TGCCTTGCTTCATCGAGGATGGCACACGGACCGACGTGTCAGAAGACTAC
CTACAACACTTCGACGATCTTGCGATGTTTCTTGACAAACCATGGTGGAA
GCGGATCTGGGTTATCCAGGAAATGGTCCTGCCGCCAAAAATCCGGTTTG
TATATGGCTCTGAGCAGTTCTCTTACGATACACTGCGAGCGGTCCTGGAA
ATATTCCGTGAGCATGCTGCGCATTGTTGTAAGAACTTTCGATTGCGTCT
TCGTGGGGCTGGTTTCGACCCGTTGATGGTCATTGAAGAACGAGTTTCAC
CTATGGTATATGTTCGGGAACGATGGAGGAACTCGGATGAGAAAATCACT
CTGCTCCAACTGAGAAGAATGTTTTCGGCGTCCCAGGCATCTGTCTCTCG
AGATCTGTTCTATGCCCTTCTAGGTATCGTCAACAGTTGGGGCCTAGCGA
CGCCTCTTCAACCGGACTACAACATCAGCTCAAGAGACGCCATCATTAAA
GCCGTTTACGCCTGTATGGTGGAATCTGGCGGCGCCTCCTTCCTGCAAGG
AGAAAGAATCAGCGAGGACCGGTCGCCTGATTTCCCGTCCTGGTTACCTG
ATCTTCATGTCCGCTCAACTCCATCTAGACGGGTCTGGGGAGAACAGCAG
CGCCTCAAGATTGCCGAGAGGTTCTCCGCCACAGCAGGGTTGAAGCAGGA
TACTACTCAATTTTCTCTTGCTAGCGACGGTACCCTTCGTCTGCAAGCCC
TGAAAGTGGATAAAGTCATTCGTGTTGGGGATGCAACAGACCCACTTGAT
GAATTTGACAAGGTTCCTGATGTATTCCGGCAATGGATGGGAATGATCGG
CATGGGGGTTCAGGACTGGCCCGAGAGCCCCCCGACTAGAGGATCGCAGC
AGGACAGCTTCTGGCGAACAATTTTAAACGACTCTATTGAAGTTGAGCAG
GGAGCAGGATATGTCCGACCGTCCGATGGTGATTACCATCAATTGCTGGA
CTTGTGGAAGATGATCACTGCGACCGTCTGGCCACTACTTGTGAGTATGG
CAAGATCATCAGTGGAGACGCGCAAAAGCGATAGTGAGCCCTTCGAGATG
ATGAATACCTTGCTTAACCTGGCACCGTCTATTGCTTACCACGTATTGGT
TTGTCTCTGGGGGAGGCGAATGATTATTACGGAAAAGGGATTAATTGGAC
TGGCCCCTAGGACTGTCCAGGAAGGAGATGAGGTGCATATTCTGCTTGGC
TCAGAAGTTCCGTTCATTCTGCGACCAGGACACGTCAACGTCTATTCTTC
TGAGGTGGACCGCTACTCCACCCCGGTTTATACAGTCATCGGGAATGGGT
ATCTCCACGGGGTAATGTGTGGCGAGGCCTTTGAAGGAGACGGGCAGAAT
GAGATCACAGTGATTGCGCTTCATTAG
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Coding sequence (CDS) from alignment at ch3:2031130..2032806-

>KJC3_003485-T1 ID=KJC3_003485-T1|Name=KJC3_003485-T1|organism=Aspergillus niger KJC3|type=CDS|length=1677bp|location=Sequence derived from alignment at ch3:2031130..2032806- (Aspergillus niger KJC3)
ATGCGCCGGCTGCGCAAGTCCACTGAGCCGCGGGTGTTTTGGATAGATGC
CATCTGCATCAACCAAAGCAACAACGATGAGAAGTCCAGCCAGGTTTCAT
TCATGGGTGAGATCTACCAAGGGTCGCAGGAAACAACACTCTGGCTTGGA
GAAGACCCTTACACTGTGGAGGTGGGCTCCAAGTCTGCTGCTGGTCACCG
ATTAGCCGAATTGTTCGAGATCCTCCTCAGCGACAAGCACATGTCGGAAC
TGCCTTGCTTCATCGAGGATGGCACACGGACCGACGTGTCAGAAGACTAC
CTACAACACTTCGACGATCTTGCGATGTTTCTTGACAAACCATGGTGGAA
GCGGATCTGGGTTATCCAGGAAATGGTCCTGCCGCCAAAAATCCGGTTTG
TATATGGCTCTGAGCAGTTCTCTTACGATACACTGCGAGCGGTCCTGGAA
ATATTCCGTGAGCATGCTGCGCATTGTTGTAAGAACTTTCGATTGCGTCT
TCGTGGGGCTGGTTTCGACCCGTTGATGGTCATTGAAGAACGAGTTTCAC
CTATGGTATATGTTCGGGAACGATGGAGGAACTCGGATGAGAAAATCACT
CTGCTCCAACTGAGAAGAATGTTTTCGGCGTCCCAGGCATCTGTCTCTCG
AGATCTGTTCTATGCCCTTCTAGGTATCGTCAACAGTTGGGGCCTAGCGA
CGCCTCTTCAACCGGACTACAACATCAGCTCAAGAGACGCCATCATTAAA
GCCGTTTACGCCTGTATGGTGGAATCTGGCGGCGCCTCCTTCCTGCAAGG
AGAAAGAATCAGCGAGGACCGGTCGCCTGATTTCCCGTCCTGGTTACCTG
ATCTTCATGTCCGCTCAACTCCATCTAGACGGGTCTGGGGAGAACAGCAG
CGCCTCAAGATTGCCGAGAGGTTCTCCGCCACAGCAGGGTTGAAGCAGGA
TACTACTCAATTTTCTCTTGCTAGCGACGGTACCCTTCGTCTGCAAGCCC
TGAAAGTGGATAAAGTCATTCGTGTTGGGGATGCAACAGACCCACTTGAT
GAATTTGACAAGGTTCCTGATGTATTCCGGCAATGGATGGGAATGATCGG
CATGGGGGTTCAGGACTGGCCCGAGAGCCCCCCGACTAGAGGATCGCAGC
AGGACAGCTTCTGGCGAACAATTTTAAACGACTCTATTGAAGTTGAGCAG
GGAGCAGGATATGTCCGACCGTCCGATGGTGATTACCATCAATTGCTGGA
CTTGTGGAAGATGATCACTGCGACCGTCTGGCCACTACTTGTGAGTATGG
CAAGATCATCAGTGGAGACGCGCAAAAGCGATAGTGAGCCCTTCGAGATG
ATGAATACCTTGCTTAACCTGGCACCGTCTATTGCTTACCACGTATTGGT
TTGTCTCTGGGGGAGGCGAATGATTATTACGGAAAAGGGATTAATTGGAC
TGGCCCCTAGGACTGTCCAGGAAGGAGATGAGGTGCATATTCTGCTTGGC
TCAGAAGTTCCGTTCATTCTGCGACCAGGACACGTCAACGTCTATTCTTC
TGAGGTGGACCGCTACTCCACCCCGGTTTATACAGTCATCGGGAATGGGT
ATCTCCACGGGGTAATGTGTGGCGAGGCCTTTGAAGGAGACGGGCAGAAT
GAGATCACAGTGATTGCGCTTCATTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003485KJC3_003485Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003485-T1.cdsKJC3_003485-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003485-T1.exon1KJC3_003485-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003485-T1KJC3_003485-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010730
DBxrefPFAM:PF06985
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2031130..2032806 -
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