You are here

Home

KJC3_003486-T1, KJC3_003486-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003486-T1
Unique NameKJC3_003486-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2036081..2037739+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003486-T1 ID=KJC3_003486-T1|Name=KJC3_003486-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1659bp|location=Sequence derived from alignment at ch3:2036081..2037739+ (Aspergillus niger KJC3)
ATGCCCTCTTTCACTACCAAGGGCCTCGCCTCTGTGGCCCTGAGCGCTGC
TGTCGCCCAGGCCCAGCTTTGGGATCAGGTCATCCAGACAAACTACGGTC
CTGTTAAGGGCTTCAAGTACTTCACCAACGAGACTGTTCTCCAGAAGTAC
TTCGGCACCACCGAGTCCAATGTCACCGCTTTCCTGGGTATCCCCTTCGC
TGCCGACACTGGCTACCAGAACCGCTGGAAGCCTCCCCAGCCCCGTGAGC
CCTGGAACGAGACCTTGAACGCCACCTCTTTCGGCCCTGCGTGTCCCAGC
AACTACGAGACTTATATCAGCGAGGACTGCCTCAGCCTGAACCTCTGGAC
CAATGCTGCCTCGGCCGACGCCAAGCTCCCCGTCATTGTTTGGAACCAGG
GTTCCGACGAGACCAGTGATAATGCCTGGTGGTACGGTGGTGGTATGGCC
ATGAAGGATGTTATCCTCATCTCCTTCAACCGCCGTGACGATGCCTTCGG
CTACCTCGCCCTCCCCGAGCTCAACGCTGAGGGTCTTGCTACCACCGGCC
ACAACACCTCTGGCAACTATGGTGTCTTGGATCAACTGGAGGTTCTCAAA
TGGGTCCAGAAGAACATCGCCAACTTCGGTGGTGACCCTGACCGTGTGAC
CGTCGCTGGTCAGTCCTTCGGTTCTTCCCAGGTCTACCACGCCGTCAACA
GCCCTCTCTTCTCCGGCTACTTCCACGGTGCTATTTCCGAGTCTGGTATC
CGCTACCCCTACGACCCCCTGCTCGCCGGTCTGGCCACTTCCTACGTCAA
CATGTCTACCGCCATTACCCACAGTGAAGCCTACATGAGCGAGCACAACG
TCTCCAGCGTCGCCGAGCTGCGTGAGCTCTCCATGGAGGACCTCCTCATC
GGCTCTCAGGACCGTGTCAACGACACCTGGATCTGGTGGGTTACTGCTCT
CTCCGCAGGCTACCCCCTGATTTTCAAGCCCGTCCTGGACGACTACGTCC
TTCCCTCCACCTACCTCGAGACCCTCATCAACGGCCCTGCCAACGACGTC
CCCGTCATCACCGGTAACACCAAGGACGAGTCCGGCGCCTCCACCACCAC
CGACTACACCGTCCACGAATACCTCAACTACACTTCCCTGAAGTACGGTG
ACCTCTTCGACCGCTACATCAAGCTCTACCCTACCGACAACAACGCCACC
ACCGCCGACCGTTCCTGGAACGCCGCCGCCCGTGACGCCTCCCTCATCGG
CTCCTGGGCCTACGCCACCGACTGGTACAAGGCCGCCGAGTCCGACTTCT
ACACCTACTACTGGACCCACGCTCCCCCGGGCCAGACCCAGGGTGCCTTC
CACCAGTCCGAGATCATGTACGCCCTGAACGCTCTCTACGCCAACGCCGA
CACCTACCCCTTCACCGACGTCGACTACGATATCGGTGAGAAGATGTCCG
CCTACTGGGCCAACTTCGCCAAGACCCTCAACCCTAACCAGGGTGGCTCT
TACACTGGCAAGGGCAGCCTGCCCAACTGGAGCCCTAACAGCCCCAACGG
CACCCAGGTCGTCATGGAGCTGGGTAACTACTTCGGAAACGTCCCCATTG
CTCACCCTAGCCAGGTCAAGCTTATCATGGACTGGTTCCACCAGCAGATT
CCTTACTAG
back to top

Coding sequence (CDS) from alignment at ch3:2036081..2037739+

>KJC3_003486-T1 ID=KJC3_003486-T1|Name=KJC3_003486-T1|organism=Aspergillus niger KJC3|type=CDS|length=1659bp|location=Sequence derived from alignment at ch3:2036081..2037739+ (Aspergillus niger KJC3)
ATGCCCTCTTTCACTACCAAGGGCCTCGCCTCTGTGGCCCTGAGCGCTGC
TGTCGCCCAGGCCCAGCTTTGGGATCAGGTCATCCAGACAAACTACGGTC
CTGTTAAGGGCTTCAAGTACTTCACCAACGAGACTGTTCTCCAGAAGTAC
TTCGGCACCACCGAGTCCAATGTCACCGCTTTCCTGGGTATCCCCTTCGC
TGCCGACACTGGCTACCAGAACCGCTGGAAGCCTCCCCAGCCCCGTGAGC
CCTGGAACGAGACCTTGAACGCCACCTCTTTCGGCCCTGCGTGTCCCAGC
AACTACGAGACTTATATCAGCGAGGACTGCCTCAGCCTGAACCTCTGGAC
CAATGCTGCCTCGGCCGACGCCAAGCTCCCCGTCATTGTTTGGAACCAGG
GTTCCGACGAGACCAGTGATAATGCCTGGTGGTACGGTGGTGGTATGGCC
ATGAAGGATGTTATCCTCATCTCCTTCAACCGCCGTGACGATGCCTTCGG
CTACCTCGCCCTCCCCGAGCTCAACGCTGAGGGTCTTGCTACCACCGGCC
ACAACACCTCTGGCAACTATGGTGTCTTGGATCAACTGGAGGTTCTCAAA
TGGGTCCAGAAGAACATCGCCAACTTCGGTGGTGACCCTGACCGTGTGAC
CGTCGCTGGTCAGTCCTTCGGTTCTTCCCAGGTCTACCACGCCGTCAACA
GCCCTCTCTTCTCCGGCTACTTCCACGGTGCTATTTCCGAGTCTGGTATC
CGCTACCCCTACGACCCCCTGCTCGCCGGTCTGGCCACTTCCTACGTCAA
CATGTCTACCGCCATTACCCACAGTGAAGCCTACATGAGCGAGCACAACG
TCTCCAGCGTCGCCGAGCTGCGTGAGCTCTCCATGGAGGACCTCCTCATC
GGCTCTCAGGACCGTGTCAACGACACCTGGATCTGGTGGGTTACTGCTCT
CTCCGCAGGCTACCCCCTGATTTTCAAGCCCGTCCTGGACGACTACGTCC
TTCCCTCCACCTACCTCGAGACCCTCATCAACGGCCCTGCCAACGACGTC
CCCGTCATCACCGGTAACACCAAGGACGAGTCCGGCGCCTCCACCACCAC
CGACTACACCGTCCACGAATACCTCAACTACACTTCCCTGAAGTACGGTG
ACCTCTTCGACCGCTACATCAAGCTCTACCCTACCGACAACAACGCCACC
ACCGCCGACCGTTCCTGGAACGCCGCCGCCCGTGACGCCTCCCTCATCGG
CTCCTGGGCCTACGCCACCGACTGGTACAAGGCCGCCGAGTCCGACTTCT
ACACCTACTACTGGACCCACGCTCCCCCGGGCCAGACCCAGGGTGCCTTC
CACCAGTCCGAGATCATGTACGCCCTGAACGCTCTCTACGCCAACGCCGA
CACCTACCCCTTCACCGACGTCGACTACGATATCGGTGAGAAGATGTCCG
CCTACTGGGCCAACTTCGCCAAGACCCTCAACCCTAACCAGGGTGGCTCT
TACACTGGCAAGGGCAGCCTGCCCAACTGGAGCCCTAACAGCCCCAACGG
CACCCAGGTCGTCATGGAGCTGGGTAACTACTTCGGAAACGTCCCCATTG
CTCACCCTAGCCAGGTCAAGCTTATCATGGACTGGTTCCACCAGCAGATT
CCTTACTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003486KJC3_003486Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003486-T1.exon1KJC3_003486-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003486-T1.cdsKJC3_003486-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003486-T1KJC3_003486-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
NoteMEROPS:MER0033226
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR002018
DBxrefPFAM:PF00135
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2036081..2037739 +
Powered by Drupal