You are here

Home

KJC3_003490-T1, KJC3_003490-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003490-T1
Unique NameKJC3_003490-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2043355..2044672+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003490-T1 ID=KJC3_003490-T1|Name=KJC3_003490-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1318bp|location=Sequence derived from alignment at ch3:2043355..2044672+ (Aspergillus niger KJC3)
GTCCACCCTACCCTTCATCAACTTGACATCACCGATGAAGGGAGCAATAT
TCCAGCCCGTGAAACATGGATTTACCCCGTGTCAACGACCAAGATGCGAT
CATCTCTCCAGCACTTCACCCACTCGCAATCGGAGAGATTAACGAGGGCC
TACAACCTCCCCAGGAAACATTGAGGGTGTTATCTATTTTGACAGATGCT
GGAATACAGTGTTGTTTTGTTCAAGAACAAGCGCTAATATACTATGGAAC
AGCGCGCGTACCACGTGTACGTGCAGACCCTTTGCCGTGTGAGAACCAGA
ATGAAAGACACTTAACAATTATCCCAGGACCTAGTGCTATGCATACAGGA
CGAGCAATTCGAACGCGCGGTAGAGCTTTTCACCTCTCACCCAGATATTC
TCGAGCCCTGTGGCCCAAATCCCCTCAAATCGCCGAATTTGCTGAACCAC
AAGTATCCTAGGTTCAAGGCCATAGGGTGGGCCTCCTTCTGGCTACTAGT
GCCGGGAGATTACTGCCATCTCACTGTTGAACCCGAGAACATAGAGTGGA
GTCTAGGTGGGTCACAGTACAGACACCCTTTATCTTGGAAGAAATAGTTT
AACGTCAGCAGGTGGCTTGCCGTACCCCAAGCTTCCAGTGTACGTGCAAA
GCGCGATTGACTCCAAAAGTCTATTAGACCTAGAAGAGTTGATTGATGGG
ATGAATCTCGCGGAGGAATGGGGTGACAGAGAACTCGATCTAGAAGGCCA
TACCGATACAAAATGGCTGGAAGATTATGCTCAAGCTTTCCGGGATGATG
GGGTAGATGAAATGTTCATTTTCGTTGACCCTACTCCTGTATCTCGGAAA
GAGATCTGGACGCATGCAGTTCGAAATAAACACCGGCGGTTAGGATGGAA
ATACTCGCCGGAGACCCACGCGACTAGATATCGGAAATACGGGTCTAAGG
ATCCACGAAGTGTCCCCAGACCTGGTATGTAGATAACTCTATCATGCCAG
TCGCAAAAGTACAATGCTTGTCAGGAATCGCATTAAGCAGCTAGCACATG
AAAGCATGATCAACGCCCAAAGAATGTTTTCCAGCGGGCATGGTTCACGG
GAGATAAAATCTCAAGGAAAGTAGTAACGGTATCCGGATCAAAATGATCG
ACAGCCGCTCGGATTTCTGTGCCATAGGTCCGCACCAAGTGTTGAATGTC
CTCCATATCAGCAAGTCTCTGGCGAGCAGCGAAGGCTGCCATTTTGCCTC
GCATGAGAAAGACGGGCGCTATTATATAGATCATTTGCATCCCAACCGTA
GTATTGATAGAAATTTGC
back to top

Coding sequence (CDS) from alignment at ch3:2043355..2044672+

>KJC3_003490-T1 ID=KJC3_003490-T1|Name=KJC3_003490-T1|organism=Aspergillus niger KJC3|type=CDS|length=2403bp|location=Sequence derived from alignment at ch3:2043355..2044672+ (Aspergillus niger KJC3)
ATGGATTTACCCCGTGTCAACGACCAAGATGCGATCATCTCTCCAGCACT
TCACCCACTCGCAATCGGAGAGATTAACGAGGGCCTACAACCTCCCCAGG
AAACATTGAGGGTGTTATCTATTTTGACAGATGCTGGAATACAGTGTTGT
TTTGTTCAAGAACAAGCGCTAATATACTATGGAACAGCGCGCGTACCACG
TGACCTAGTGCTATGCATACAGGACGAGCAATTCGAACGCGCGGTAGAGC
TTTTCACCTCTCACCCAGATATTCTCGAGCCCTGTGGCCCAAATCCCCTC
AAATCGCCGAATTTGCTGAACCACAAGTATCCTAGGTTCAAGGCCATAGG
GTGGGCCTCCTTCTGGCTACTAGTGCCGGGAGATTACTGCCATCTCACTG
TTGAACCCGAGAACATAGAGTGGAGTCTAGGTGGCTTGCCGTACCCCAAG
CTTCCAGTGTACGTGCAAAGCGCGATTGACTCCAAAAGTCTATTAGACCT
AGAAGAGTTGATTGATGGGATGAATCTCGCGGAGGAATGGGGTGACAGAG
AACTCGATCTAGAAGGCCATACCGATACAAAATGGCTGGAAGATTATGCT
CAAGCTTTCCGGGATGATGGGGTAGATGAAATGTTCATTTTCGTTGACCC
TACTCCTGTATCTCGGAAAGAGATCTGGACGCATGCAGTTCGAAATAAAC
ACCGGCGGTTAGGATGGAAATACTCGCCGGAGACCCACGCGACTAGATAT
CGGAAATACGGGTCTAAGGATCCACGAAGTGTCCCCAGACCTGGTATGTA
GATGGATTTACCCCGTGTCAACGACCAAGATGCGATCATCTCTCCAGCAC
TTCACCCACTCGCAATCGGAGAGATTAACGAGGGCCTACAACCTCCCCAG
GAAACATTGAGGGTGTTATCTATTTTGACAGATGCTGGAATACAGTGTTG
TTTTGTTCAAGAACAAGCGCTAATATACTATGGAACAGCGCGCGTACCAC
GTGACCTAGTGCTATGCATACAGGACGAGCAATTCGAACGCGCGGTAGAG
CTTTTCACCTCTCACCCAGATATTCTCGAGCCCTGTGGCCCAAATCCCCT
CAAATCGCCGAATTTGCTGAACCACAAGTATCCTAGGTTCAAGGCCATAG
GGTGGGCCTCCTTCTGGCTACTAGTGCCGGGAGATTACTGCCATCTCACT
GTTGAACCCGAGAACATAGAGTGGAGTCTAGGTGGCTTGCCGTACCCCAA
GCTTCCAGTGTACGTGCAAAGCGCGATTGACTCCAAAAGTCTATTAGACC
TAGAAGAGTTGATTGATGGGATGAATCTCGCGGAGGAATGGGGTGACAGA
GAACTCGATCTAGAAGGCCATACCGATACAAAATGGCTGGAAGATTATGC
TCAAGCTTTCCGGGATGATGGGGTAGATGAAATGTTCATTTTCGTTGACC
CTACTCCTGTATCTCGGAAAGAGATCTGGACGCATGCAGTTCGAAATAAA
CACCGGCGGTTAGGATGGAAATACTCGCCGGAGACCCACGCGACTAGATA
TCGGAAATACGGGTCTAAGGATCCACGAAGTGTCCCCAGACCTGGTATGT
AGATGGATTTACCCCGTGTCAACGACCAAGATGCGATCATCTCTCCAGCA
CTTCACCCACTCGCAATCGGAGAGATTAACGAGGGCCTACAACCTCCCCA
GGAAACATTGAGGGTGTTATCTATTTTGACAGATGCTGGAATACAGTGTT
GTTTTGTTCAAGAACAAGCGCTAATATACTATGGAACAGCGCGCGTACCA
CGTGACCTAGTGCTATGCATACAGGACGAGCAATTCGAACGCGCGGTAGA
GCTTTTCACCTCTCACCCAGATATTCTCGAGCCCTGTGGCCCAAATCCCC
TCAAATCGCCGAATTTGCTGAACCACAAGTATCCTAGGTTCAAGGCCATA
GGGTGGGCCTCCTTCTGGCTACTAGTGCCGGGAGATTACTGCCATCTCAC
TGTTGAACCCGAGAACATAGAGTGGAGTCTAGGTGGCTTGCCGTACCCCA
AGCTTCCAGTGTACGTGCAAAGCGCGATTGACTCCAAAAGTCTATTAGAC
CTAGAAGAGTTGATTGATGGGATGAATCTCGCGGAGGAATGGGGTGACAG
AGAACTCGATCTAGAAGGCCATACCGATACAAAATGGCTGGAAGATTATG
CTCAAGCTTTCCGGGATGATGGGGTAGATGAAATGTTCATTTTCGTTGAC
CCTACTCCTGTATCTCGGAAAGAGATCTGGACGCATGCAGTTCGAAATAA
ACACCGGCGGTTAGGATGGAAATACTCGCCGGAGACCCACGCGACTAGAT
ATCGGAAATACGGGTCTAAGGATCCACGAAGTGTCCCCAGACCTGGTATG
TAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003490KJC3_003490Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003490-T1KJC3_003490-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003490-T1.utr5p1KJC3_003490-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003490-T1.exon1KJC3_003490-T1.exon1Aspergillus niger KJC3exon
KJC3_003490-T1.exon2KJC3_003490-T1.exon2Aspergillus niger KJC3exon
KJC3_003490-T1.exon3KJC3_003490-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003490-T1.cdsKJC3_003490-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003490-T1.utr3p1KJC3_003490-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2043355..2044672 +
Powered by Drupal