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KJC3_003507-T1, KJC3_003507-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003507-T1
Unique NameKJC3_003507-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2123023..2124295+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003507-T1 ID=KJC3_003507-T1|Name=KJC3_003507-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1273bp|location=Sequence derived from alignment at ch3:2123023..2124295+ (Aspergillus niger KJC3)
GCCGCAGTGACGCTAGTATATAATACAGTATCAATGCTGTGTAATATATT
CCTTATCTTTGAGATAGAAGACTAATCAATGGCGGGAACCTGGGCCAGCT
ACTTCAGGTATGAAACTCAGGTCTCACCCCGGGTGCACCTCGCTTGGAGT
GTCCGACCACATACAAAATTAACTAAATCACTAAAATTCCGGTCAAGCTA
CTATGTCAATACCGTATGCCTCGGGTAGCTCTTGTGCAAGGGTCCTGGCT
CCACCCTTCTCGAGCTATACAAATGCTTATGGCCCGCGGCATGACTAGAT
GGGTCAAGGCTTTTCCTAATCTCCTTTTCACAGGATGAGGCAGCTTCCAT
TTTCCCCGACCATATAGTTTATCAAGAACCCCTGAGTATCAATGCAGAAT
GTCCAGCTGTCCCTAATCCCGCATATCTCATAATGTATTCATTTAACACC
TTCCCTCTCGGCCTCAGTGAGCAAGAAATGAATGACCTGTCCAACAACTA
TCACCAACCAGACGAAACCGGGCTGCCAATGCAGGAAAACTCGGTTTTTT
CAGCTGCCTTACAGGGAATTTCTCGGATGGAACATAATGAAACCCGGATT
CACTCAGAACCTGCCTATCAGGCACCTGGGTCAGTGACAGCGTAAGGCCA
TCAAATGGCATTCCAAGATGATATCTGACCAGCATGACAGCCTAGAAGCC
GTCAGCATGCAATCTCACGGTACACCAAGGTGAGGCACCCACTGCTCTAA
ATATCATCAGTACTGATGCAGTCACGGCAGTGACCTGGTCTTGCAGAAGT
TATCTGAGATGGAGTCTGCCGTAACCAGACTGAACGAAAAGGTCACTAGA
GGCACCAATGAGGGAGACAAGGGCCCGAACTCTTCAGATGAAAGGCGAGC
TAGAAAGCTGGAGAACGCAGCTAACGAGACAATTGAGGAGCGGGTTGACA
GATTAAGTCAGAGAGTCGATAATTTGACATTGAAAGTCGATGGCTTTGCT
GTTATGGTGGACCATGTTTCCCGGCTCTCGACCCGAGTTGATTTCATCAA
CCGATATCTGAATGAGTACTCAAACCTGCTGCAGAAGGAGACGGAGCGGA
CAACAGCCATGACTTCTGGGTTAGATGACGCCTGTCGGAGATTTCATCAT
TTACTTTCTAGTATATCAAGGCCACTCGACTCTGGGGATCTGATGGGTTT
CTACGAAGACTAGCACGTAACATTGAGTCTATGCTGGAGGGCCATAGTCT
ACATTTACTTATCTTGACCAAGG
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Coding sequence (CDS) from alignment at ch3:2123023..2124295+

>KJC3_003507-T1 ID=KJC3_003507-T1|Name=KJC3_003507-T1|organism=Aspergillus niger KJC3|type=CDS|length=2007bp|location=Sequence derived from alignment at ch3:2123023..2124295+ (Aspergillus niger KJC3)
ATGTATTCATTTAACACCTTCCCTCTCGGCCTCAGTGAGCAAGAAATGAA
TGACCTGTCCAACAACTATCACCAACCAGACGAAACCGGGCTGCCAATGC
AGGAAAACTCGGTTTTTTCAGCTGCCTTACAGGGAATTTCTCGGATGGAA
CATAATGAAACCCGGATTCACTCAGAACCTGCCTATCAGGCACCTGGCCT
AGAAGCCGTCAGCATGCAATCTCACGGTACACCAAGTGACCTGGTCTTGC
AGAAGTTATCTGAGATGGAGTCTGCCGTAACCAGACTGAACGAAAAGGTC
ACTAGAGGCACCAATGAGGGAGACAAGGGCCCGAACTCTTCAGATGAAAG
GCGAGCTAGAAAGCTGGAGAACGCAGCTAACGAGACAATTGAGGAGCGGG
TTGACAGATTAAGTCAGAGAGTCGATAATTTGACATTGAAAGTCGATGGC
TTTGCTGTTATGGTGGACCATGTTTCCCGGCTCTCGACCCGAGTTGATTT
CATCAACCGATATCTGAATGAGTACTCAAACCTGCTGCAGAAGGAGACGG
AGCGGACAACAGCCATGACTTCTGGGTTAGATGACGCCTGTCGGAGATTT
CATCATTTACTTTCTAGTATATCAAGGCCACTCGACTCTGGGGATCTGAT
GGGTTTCTACGAAGACTAGATGTATTCATTTAACACCTTCCCTCTCGGCC
TCAGTGAGCAAGAAATGAATGACCTGTCCAACAACTATCACCAACCAGAC
GAAACCGGGCTGCCAATGCAGGAAAACTCGGTTTTTTCAGCTGCCTTACA
GGGAATTTCTCGGATGGAACATAATGAAACCCGGATTCACTCAGAACCTG
CCTATCAGGCACCTGGCCTAGAAGCCGTCAGCATGCAATCTCACGGTACA
CCAAGTGACCTGGTCTTGCAGAAGTTATCTGAGATGGAGTCTGCCGTAAC
CAGACTGAACGAAAAGGTCACTAGAGGCACCAATGAGGGAGACAAGGGCC
CGAACTCTTCAGATGAAAGGCGAGCTAGAAAGCTGGAGAACGCAGCTAAC
GAGACAATTGAGGAGCGGGTTGACAGATTAAGTCAGAGAGTCGATAATTT
GACATTGAAAGTCGATGGCTTTGCTGTTATGGTGGACCATGTTTCCCGGC
TCTCGACCCGAGTTGATTTCATCAACCGATATCTGAATGAGTACTCAAAC
CTGCTGCAGAAGGAGACGGAGCGGACAACAGCCATGACTTCTGGGTTAGA
TGACGCCTGTCGGAGATTTCATCATTTACTTTCTAGTATATCAAGGCCAC
TCGACTCTGGGGATCTGATGGGTTTCTACGAAGACTAGATGTATTCATTT
AACACCTTCCCTCTCGGCCTCAGTGAGCAAGAAATGAATGACCTGTCCAA
CAACTATCACCAACCAGACGAAACCGGGCTGCCAATGCAGGAAAACTCGG
TTTTTTCAGCTGCCTTACAGGGAATTTCTCGGATGGAACATAATGAAACC
CGGATTCACTCAGAACCTGCCTATCAGGCACCTGGCCTAGAAGCCGTCAG
CATGCAATCTCACGGTACACCAAGTGACCTGGTCTTGCAGAAGTTATCTG
AGATGGAGTCTGCCGTAACCAGACTGAACGAAAAGGTCACTAGAGGCACC
AATGAGGGAGACAAGGGCCCGAACTCTTCAGATGAAAGGCGAGCTAGAAA
GCTGGAGAACGCAGCTAACGAGACAATTGAGGAGCGGGTTGACAGATTAA
GTCAGAGAGTCGATAATTTGACATTGAAAGTCGATGGCTTTGCTGTTATG
GTGGACCATGTTTCCCGGCTCTCGACCCGAGTTGATTTCATCAACCGATA
TCTGAATGAGTACTCAAACCTGCTGCAGAAGGAGACGGAGCGGACAACAG
CCATGACTTCTGGGTTAGATGACGCCTGTCGGAGATTTCATCATTTACTT
TCTAGTATATCAAGGCCACTCGACTCTGGGGATCTGATGGGTTTCTACGA
AGACTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003507KJC3_003507Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003507-T1KJC3_003507-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003507-T1.utr5p1KJC3_003507-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_003507-T1.utr5p2KJC3_003507-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003507-T1.exon1KJC3_003507-T1.exon1Aspergillus niger KJC3exon
KJC3_003507-T1.exon2KJC3_003507-T1.exon2Aspergillus niger KJC3exon
KJC3_003507-T1.exon3KJC3_003507-T1.exon3Aspergillus niger KJC3exon
KJC3_003507-T1.exon4KJC3_003507-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003507-T1.cdsKJC3_003507-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003507-T1.utr3p1KJC3_003507-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2123023..2124295 +
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