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KJC3_003522-T1, KJC3_003522-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003522-T1
Unique NameKJC3_003522-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2170844..2172794-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003522-T1 ID=KJC3_003522-T1|Name=KJC3_003522-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1951bp|location=Sequence derived from alignment at ch3:2170844..2172794- (Aspergillus niger KJC3)
GTCATTTTAGACTACATTTAATAGCCCCAGGCATCTAATTCTGATCATTT
GCCCTGCTGTCGCCTAAAACCCAGATACAGTACCCCTTTCACCATCGGCC
TGCGTGAGGTCCAAACTATCAGGAAACTATCGGGGAAACTTTCTCAGCTT
TATTTCTTTCTTTTCACCAGTCTAATCGTGGTAACAAGGACCAAAAGTCT
GTGTTTGGCCAAGGTCGGGGTGAATTAGTTGTGTGCAGTGCACCATTTTC
CCCTTGCATTTGAATACGCCTCTGTAGGTAAAGTTTTCCCAAGCATTGTA
TGATTGCCGGGCAAAAAGGTGTTTTCGAGATGAAGGTGGCGCACAGCATG
AGAATTCTCAAACCTGCTCTAGTGATCGCAATGTTTGCTTTCCTTGGGTT
ATCGGTAGGGACAACCAGCACACCTGTATCTGAGACACCACATACCATTG
TCGCCGCAGAAGACGAATTCACGACTGCATTGTCGCTGAGTAACTACGAT
CTCTCCGAGTTCACTTCATACAATTTCAGTACCCTCTACACGAAACTGAT
TGGCTTTGATGGATGCTCCGCAGCGCAGCGCACCCAAATCTTCTCCGGCT
GGCAGCAGTCGTGGAAAATCATGAACCATATATACTGGGCAGCTCGCAAG
GGAATCGACTACGATGAGTTTGTTGCACTCGAGTTTCTGGCCCCGTCACT
CCGCAACGGGGACCAGAAGTCTCAATTCAGGGAAATATTCATGAACCTTG
CCACCATACAGCCCGGCTGGCTCCCATCTTGGCTGGACTGGAAACTGTCC
GTCCGCTGCGATGACCCAGAATCAAGGTGTCCATCGCCAGTTCATGCGTA
TGCAGGTCAAAACGACACCAAGTACGACGTGGCGTACATAAATTTCTGCG
AAGAGTACTTCAGCCTACAGACCCTTGATGAGGTCATGCGGTACACCAAC
AGAACTGAATATGATGACCCCAATATATGCGGAAATATGTACTTGTACGG
TGAGAATCAGGCCCGTGTTTGGCTGCACGAGCTCTTACATATCGACTGGG
TATCGAAGGCCAACCAATATGGAAGAAACAATCACGTCACCGACATCAAA
GTCGGGTACAGAAACTTCCATGGAAGCACCACATGGTTCAGTGCTTACGG
ACCCTTACTGTGCAAAGCCTTAGCGCGCGCTACAATTTCCCCTGGTTTCT
GGGTCATTCAGAATGCTGATAGCCTTACCATGTACATGATCGCCAAATAT
GTCCAGGATAAGATGGGCGCGTACCCGCATCTGCCGTGGGCGCCAGAACC
GCCTTCGTCTGTGGATATGCCTATGGAAGTTGGCAATCTTTTCACAGTCT
ACCCCAATGGGACGGGGGTTCCTTCAAAGGACAATATCCCGGATGATGAA
CGGGAAAGTGGTGATAATGACAACGGCTATGTTGCTGATAATGAGAACTC
TGTCGATGCCCATCCTGATAAAGTTGTGCTGAAGTCATGGCCATTGAGGA
CAGATTACCCTACCGCATACCTGTCAATTTGGTCCTCGTGGGCTGGCCGT
ACTGCCGCACCCACGCCTGTTGTTGAATCCCAACGGCTCTCGCAAGTGTT
ACTTGTGCCGCAATAATTTACGAGTCCTTCAAGGATTCACAACTACACGA
CCAATATTGGTCCATATCAACTAGCTTATAGAGCTTTCCTCAGCTAAATA
TAATTACGAGCGGAAACAAACTCCATTTGGTCATGTGCACAGACAGCAGC
CGTCTAGATTCATAGTAACCGCAGTTTCGACCAAGTGGGGGATCAGATCA
GACCCCCTATTTGTGCTCCACGCACCCAACCTTCGTTCCCTTTTGCAAGT
CCTTGATTTGATTGCGACCCAGCGTTGTTGATATATCGATCACCAAATCC
CCTGACACCTGCCATCGTTTCCAAGCTCCTACCCCAATAACTTTGCTCGA
T
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Coding sequence (CDS) from alignment at ch3:2170844..2172794-

>KJC3_003522-T1 ID=KJC3_003522-T1|Name=KJC3_003522-T1|organism=Aspergillus niger KJC3|type=CDS|length=1236bp|location=Sequence derived from alignment at ch3:2170844..2172794- (Aspergillus niger KJC3)
ATGTTTGCTTTCCTTGGGTTATCGGTAGGGACAACCAGCACACCTGTATC
TGAGACACCACATACCATTGTCGCCGCAGAAGACGAATTCACGACTGCAT
TGTCGCTGAGTAACTACGATCTCTCCGAGTTCACTTCATACAATTTCAGT
ACCCTCTACACGAAACTGATTGGCTTTGATGGATGCTCCGCAGCGCAGCG
CACCCAAATCTTCTCCGGCTGGCAGCAGTCGTGGAAAATCATGAACCATA
TATACTGGGCAGCTCGCAAGGGAATCGACTACGATGAGTTTGTTGCACTC
GAGTTTCTGGCCCCGTCACTCCGCAACGGGGACCAGAAGTCTCAATTCAG
GGAAATATTCATGAACCTTGCCACCATACAGCCCGGCTGGCTCCCATCTT
GGCTGGACTGGAAACTGTCCGTCCGCTGCGATGACCCAGAATCAAGGTGT
CCATCGCCAGTTCATGCGTATGCAGGTCAAAACGACACCAAGTACGACGT
GGCGTACATAAATTTCTGCGAAGAGTACTTCAGCCTACAGACCCTTGATG
AGGTCATGCGGTACACCAACAGAACTGAATATGATGACCCCAATATATGC
GGAAATATGTACTTGTACGGTGAGAATCAGGCCCGTGTTTGGCTGCACGA
GCTCTTACATATCGACTGGGTATCGAAGGCCAACCAATATGGAAGAAACA
ATCACGTCACCGACATCAAAGTCGGGTACAGAAACTTCCATGGAAGCACC
ACATGGTTCAGTGCTTACGGACCCTTACTGTGCAAAGCCTTAGCGCGCGC
TACAATTTCCCCTGGTTTCTGGGTCATTCAGAATGCTGATAGCCTTACCA
TGTACATGATCGCCAAATATGTCCAGGATAAGATGGGCGCGTACCCGCAT
CTGCCGTGGGCGCCAGAACCGCCTTCGTCTGTGGATATGCCTATGGAAGT
TGGCAATCTTTTCACAGTCTACCCCAATGGGACGGGGGTTCCTTCAAAGG
ACAATATCCCGGATGATGAACGGGAAAGTGGTGATAATGACAACGGCTAT
GTTGCTGATAATGAGAACTCTGTCGATGCCCATCCTGATAAAGTTGTGCT
GAAGTCATGGCCATTGAGGACAGATTACCCTACCGCATACCTGTCAATTT
GGTCCTCGTGGGCTGGCCGTACTGCCGCACCCACGCCTGTTGTTGAATCC
CAACGGCTCTCGCAAGTGTTACTTGTGCCGCAATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003522KJC3_003522Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003522-T1KJC3_003522-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003522-T1.cdsKJC3_003522-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003522-T1.utr3p1KJC3_003522-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003522-T1.exon2KJC3_003522-T1.exon2Aspergillus niger KJC3exon
KJC3_003522-T1.exon1KJC3_003522-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003522-T1.utr5p2KJC3_003522-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_003522-T1.utr5p1KJC3_003522-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2170844..2172794 -
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