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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2214466..2216386- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003540-T1 ID=KJC3_003540-T1|Name=KJC3_003540-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1921bp|location=Sequence derived from alignment at ch3:2214466..2216386- (Aspergillus niger KJC3)
CTTAACTAAGAGCCATGGACAGTCTGCCACCAGAGCTGAAGCTTTACGTG
GCAGGTGCAGTAAGAGTGCTACTATCCGCGTTTTGAGATTTGCTGATCCC
GGGGCCTAGGTGGGCGACGTGTCGCGGGAAGCCCTGCGAGCCTTATCACA
GGTCAACCGTGAGTGGAGTCAGATTGTCGCGCCCCGTCTCTATAAAAGCA
TCACAGTATCCTTCAAATCCCACGAGCCCCAAATTCGTGTACTCCAGCTG
CTGGACGCCAGCCGAATCTTGCCGCATGTTAGACATCTCACACTTCTTGC
CCGAAGCTCTCCCGTCAGTCTGCCGGTCTCGGACGAGAGCATAGGCGATT
ATCTCGAAGAAAGCCTTCCTGAAGATGTCAAGGTTCCACTATTGTGTGAA
TTCAAAGGTGATTGGACCCCATCCATCGTCCTGGTGAAGCGGCTGCCATG
TCTGCAGAATTTGAAGATCCTGGCTTTTGCAGATTATGCTGAGCTTCTGG
ATGTTGTCGCGGAGGTGCATCCCTACTGTCGTGTGTCCGTATTCCCTCTT
CGTCGGTTTAATCCTGGCTGGATTCAGGCGCGGGCCAAATGGCTTCAATC
CCCTGTGCTACATGACGTTACGGTCATTTGCCATGATGATAGGCACATGA
GGGCCTTTAGAGAGGATCCTGATCGCGTTCTGCGGGACCTTCTCCATCAA
GCGCGGCATATAAAGCATTTATCATTTCAGATCAGTGTCAAAACCTTGCA
TAGGACATCCTTGGTATATACACGCTGGCCCCCATTCCAGCCGCCAGAGA
ACGAAGTCGCTGAGGCTCCGCGCGCGAAGTTGGAGATATTGTCATTGCCA
TTGGTCACAAAGATGACTGCGAAGCAGGTGGAAAGGTGGTCCCAGATTAC
TGATCTGGGTTATCTCACTGCGTGGGCGGCGGGTACAATTGAGGAAATAA
CCGCATTGACGGCCATCACGGAACTGCAGGCCTTCCGAGCATTGAAGCGG
TTAACACTTAGCCTCAACCCACCAAAAGGCTCTTCATCCTGGCCACCAGC
AGTGAAGGGGATGTTTGACGCTCTCCCACCATTAGAATACCTCTGTCTCC
TGGGAAGATACGACCCGGCGATACTTCCCACCGCCGTTCTGGACCGACAC
GGCCCAACCCTGACCGAGTTGAAGCTGCACTACAAGCGCGCACAGTTCCA
ACCAATAGACAAGGCGATTAAGCTCTCACATAAAGGATATATTGCTCCCA
TTTTTCGCCCAGCTGTCATTGCCCGCATTGCAGCCCGCTGCCCTTCCCTG
CGGACGCTGTGGATCGGCGTGCAGCGACACAGAGGCCACCCCATTGAGGC
GCGAGCCTACGATGCTCTGGCGCTGTTCCCAGCGCTACAGTCGTTGGATC
TCGTCCTCAGCTGCCTAGCGGCAAGTAAGGCCGACGACAGGACGCCGGTT
CCGCCACGGGAGCTGAGCGCATACGAAGAAGAGCTCTTCCCATACCGCTC
CCGCCAGATCCCCAAATGGACCATCCGGGACTGCATGATCAACTCAGCCA
TCGATGAATCGCTGGCCAAGGCGATTTTTAATCGCATCCGAACGGGCCCG
CAGAGCCAGCGGATGGGTAGTTGTCTGCAGCTGCTCCGCATACATCCGCT
CCTTGGCAAGTTCGGAAAGTCGAGGGTGCGCACGGGCATCGGTCACCATC
TACCAGTCACTGCAGGGGAAATTAGTCACAAGATGGCGGGTGCATGGCAG
GTCGAGTGGCTCGGAGATGGTAGATTGCAGTTGGAAAACCGGCTCAAGTC
CAGTCATGATCAGGAAGTTATGATAAGGAGTGAAGATAGCGAGATTTTCG
AGTCTATCTGGCCATCAACTCGGAAGCCCAAGACTTGGCCCTCGGAATGG
TGTAGCTGGCCTCTGCAGTAA back to topCoding sequence (CDS) from alignment at ch3:2214466..2216386- >KJC3_003540-T1 ID=KJC3_003540-T1|Name=KJC3_003540-T1|organism=Aspergillus niger KJC3|type=CDS|length=3714bp|location=Sequence derived from alignment at ch3:2214466..2216386- (Aspergillus niger KJC3)
GTGGGCGACGTGTCGCGGGAAGCCCTGCGAGCCTTATCACAGGTCAACCG
TGAGTGGAGTCAGATTGTCGCGCCCCGTCTCTATAAAAGCATCACAGTAT
CCTTCAAATCCCACGAGCCCCAAATTCGTGTACTCCAGCTGCTGGACGCC
AGCCGAATCTTGCCGCATGTTAGACATCTCACACTTCTTGCCCGAAGCTC
TCCCGTCAGTCTGCCGGTCTCGGACGAGAGCATAGGCGATTATCTCGAAG
AAAGCCTTCCTGAAGATGTCAAGGTTCCACTATTGTGTGAATTCAAAGGT
GATTGGACCCCATCCATCGTCCTGGTGAAGCGGCTGCCATGTCTGCAGAA
TTTGAAGATCCTGGCTTTTGCAGATTATGCTGAGCTTCTGGATGTTGTCG
CGGAGGTGCATCCCTACTGTCGTGTGTCCGTATTCCCTCTTCGTCGGTTT
AATCCTGGCTGGATTCAGGCGCGGGCCAAATGGCTTCAATCCCCTGTGCT
ACATGACGTTACGGTCATTTGCCATGATGATAGGCACATGAGGGCCTTTA
GAGAGGATCCTGATCGCGTTCTGCGGGACCTTCTCCATCAAGCGCGGCAT
ATAAAGCATTTATCATTTCAGATCAGTGTCAAAACCTTGCATAGGACATC
CTTGGTATATACACGCTGGCCCCCATTCCAGCCGCCAGAGAACGAAGTCG
CTGAGGCTCCGCGCGCGAAGTTGGAGATATTGTCATTGCCATTGGTCACA
AAGATGACTGCGAAGCAGGTGGAAAGGTGGTCCCAGATTACTGATCTGGG
TTATCTCACTGCGTGGGCGGCGGGTACAATTGAGGAAATAACCGCATTGA
CGGCCATCACGGAACTGCAGGCCTTCCGAGCATTGAAGCGGTTAACACTT
AGCCTCAACCCACCAAAAGGCTCTTCATCCTGGCCACCAGCAGTGAAGGG
GATGTTTGACGCTCTCCCACCATTAGAATACCTCTGTCTCCTGGGAAGAT
ACGACCCGGCGATACTTCCCACCGCCGTTCTGGACCGACACGGCCCAACC
CTGACCGAGTTGAAGCTGCACTACAAGCGCGCACAGTTCCAACCAATAGA
CAAGGCGATTAAGCTCTCACATAAAGGATATATTGCTCCCATTTTTCGCC
CAGCTGTCATTGCCCGCATTGCAGCCCGCTGCCCTTCCCTGCGGACGCTG
TGGATCGGCGTGCAGCGACACAGAGGCCACCCCATTGAGGCGCGAGCCTA
CGATGCTCTGGCGCTGTTCCCAGCGCTACAGTCGTTGGATCTCGTCCTCA
GCTGCCTAGCGGCAAGTAAGGCCGACGACAGGACGCCGGTTCCGCCACGG
GAGCTGAGCGCATACGAAGAAGAGCTCTTCCCATACCGCTCCCGCCAGAT
CCCCAAATGGACCATCCGGGACTGCATGATCAACTCAGCCATCGATGAAT
CGCTGGCCAAGGCGATTTTTAATCGCATCCGAACGGGCCCGCAGAGCCAG
CGGATGGGTAGTTGTCTGCAGCTGCTCCGCATACATCCGCTCCTTGGCAA
GTTCGGAAAGTCGAGGGTGCGCACGGGCATCGGTCACCATCTACCAGTCA
CTGCAGGGGAAATTAGTCACAAGATGGCGGGTGCATGGCAGGTCGAGTGG
CTCGGAGATGGTAGATTGCAGTTGGAAAACCGGCTCAAGTCCAGTCATGA
TCAGGAAGTTATGATAAGGAGTGAAGATAGCGAGATTTTCGAGTCTATCT
GGCCATCAACTCGGAAGCCCAAGACTTGGCCCTCGGAATGGTGTAGCTGG
CCTCTGCAGTAAATGGACAGTCTGCCACCAGAGCTGAAGCTTTACGTGGC
AGGTGCAGTGGGCGACGTGTCGCGGGAAGCCCTGCGAGCCTTATCACAGG
TCAACCGTGAGTGGAGTCAGATTGTCGCGCCCCGTCTCTATAAAAGCATC
ACAGTATCCTTCAAATCCCACGAGCCCCAAATTCGTGTACTCCAGCTGCT
GGACGCCAGCCGAATCTTGCCGCATGTTAGACATCTCACACTTCTTGCCC
GAAGCTCTCCCGTCAGTCTGCCGGTCTCGGACGAGAGCATAGGCGATTAT
CTCGAAGAAAGCCTTCCTGAAGATGTCAAGGTTCCACTATTGTGTGAATT
CAAAGGTGATTGGACCCCATCCATCGTCCTGGTGAAGCGGCTGCCATGTC
TGCAGAATTTGAAGATCCTGGCTTTTGCAGATTATGCTGAGCTTCTGGAT
GTTGTCGCGGAGGTGCATCCCTACTGTCGTGTGTCCGTATTCCCTCTTCG
TCGGTTTAATCCTGGCTGGATTCAGGCGCGGGCCAAATGGCTTCAATCCC
CTGTGCTACATGACGTTACGGTCATTTGCCATGATGATAGGCACATGAGG
GCCTTTAGAGAGGATCCTGATCGCGTTCTGCGGGACCTTCTCCATCAAGC
GCGGCATATAAAGCATTTATCATTTCAGATCAGTGTCAAAACCTTGCATA
GGACATCCTTGGTATATACACGCTGGCCCCCATTCCAGCCGCCAGAGAAC
GAAGTCGCTGAGGCTCCGCGCGCGAAGTTGGAGATATTGTCATTGCCATT
GGTCACAAAGATGACTGCGAAGCAGGTGGAAAGGTGGTCCCAGATTACTG
ATCTGGGTTATCTCACTGCGTGGGCGGCGGGTACAATTGAGGAAATAACC
GCATTGACGGCCATCACGGAACTGCAGGCCTTCCGAGCATTGAAGCGGTT
AACACTTAGCCTCAACCCACCAAAAGGCTCTTCATCCTGGCCACCAGCAG
TGAAGGGGATGTTTGACGCTCTCCCACCATTAGAATACCTCTGTCTCCTG
GGAAGATACGACCCGGCGATACTTCCCACCGCCGTTCTGGACCGACACGG
CCCAACCCTGACCGAGTTGAAGCTGCACTACAAGCGCGCACAGTTCCAAC
CAATAGACAAGGCGATTAAGCTCTCACATAAAGGATATATTGCTCCCATT
TTTCGCCCAGCTGTCATTGCCCGCATTGCAGCCCGCTGCCCTTCCCTGCG
GACGCTGTGGATCGGCGTGCAGCGACACAGAGGCCACCCCATTGAGGCGC
GAGCCTACGATGCTCTGGCGCTGTTCCCAGCGCTACAGTCGTTGGATCTC
GTCCTCAGCTGCCTAGCGGCAAGTAAGGCCGACGACAGGACGCCGGTTCC
GCCACGGGAGCTGAGCGCATACGAAGAAGAGCTCTTCCCATACCGCTCCC
GCCAGATCCCCAAATGGACCATCCGGGACTGCATGATCAACTCAGCCATC
GATGAATCGCTGGCCAAGGCGATTTTTAATCGCATCCGAACGGGCCCGCA
GAGCCAGCGGATGGGTAGTTGTCTGCAGCTGCTCCGCATACATCCGCTCC
TTGGCAAGTTCGGAAAGTCGAGGGTGCGCACGGGCATCGGTCACCATCTA
CCAGTCACTGCAGGGGAAATTAGTCACAAGATGGCGGGTGCATGGCAGGT
CGAGTGGCTCGGAGATGGTAGATTGCAGTTGGAAAACCGGCTCAAGTCCA
GTCATGATCAGGAAGTTATGATAAGGAGTGAAGATAGCGAGATTTTCGAG
TCTATCTGGCCATCAACTCGGAAGCCCAAGACTTGGCCCTCGGAATGGTG
TAGCTGGCCTCTGCAGTAAATGGACAGTCTGCCACCAGAGCTGAAGCTTT
ACGTGGCAGGTGCA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003540-T1.utr5p1 | KJC3_003540-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2214466..2216386 - |
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