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KJC3_003543-T1, KJC3_003543-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003543-T1
Unique NameKJC3_003543-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2220731..2221203+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003543-T1 ID=KJC3_003543-T1|Name=KJC3_003543-T1|organism=Aspergillus niger KJC3|type=mRNA|length=473bp|location=Sequence derived from alignment at ch3:2220731..2221203+ (Aspergillus niger KJC3)
ATGTCGCGCCAACTTATCTCGAGCGAGAAGTTCCCTCCTAAGCCTCACAA
CTGTGAGTAGACCTTCCGAGCTTGTGCATCAGAAGAGGGATTTGACTAAC
TTGTATCTGCAGGCCCCGCGGTCAAGGTTCCCGGACTCGTCTTCTGTGCC
GGTCAGACAGCCACTGGAGAGATCAAGCAAGCCACAGTAAGCCTTCACCG
CACAGCATTCTCTTAGTGCAGAGTCCATTCGTCTAACTATCTTGACAGCG
AACTGTACTCCAAAATCTTAAGGAGGTGCTTGAGCTGTCTGGATCCTCGC
TCGAGCAAGTAGTCAAGTACAATGTGTATCTTGCAGATATGAAGGACTTT
GCTGCCATGAACGAGGTATATATCGATTTCCTGCCCAAGCCAATGCCTTC
TCGGTCGTGTCTGCAGGCAGTTCCTCCGGGTGATGGAACGGTTATTGAGA
TTGAATGCATTGCGCAGGCCTAG
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Coding sequence (CDS) from alignment at ch3:2220731..2221203+

>KJC3_003543-T1 ID=KJC3_003543-T1|Name=KJC3_003543-T1|organism=Aspergillus niger KJC3|type=CDS|length=1053bp|location=Sequence derived from alignment at ch3:2220731..2221203+ (Aspergillus niger KJC3)
ATGTCGCGCCAACTTATCTCGAGCGAGAAGTTCCCTCCTAAGCCTCACAA
CTGCCCCGCGGTCAAGGTTCCCGGACTCGTCTTCTGTGCCGGTCAGACAG
CCACTGGAGAGATCAAGCAAGCCACACGAACTGTACTCCAAAATCTTAAG
GAGGTGCTTGAGCTGTCTGGATCCTCGCTCGAGCAAGTAGTCAAGTACAA
TGTGTATCTTGCAGATATGAAGGACTTTGCTGCCATGAACGAGGTATATA
TCGATTTCCTGCCCAAGCCAATGCCTTCTCGGTCGTGTCTGCAGGCAGTT
CCTCCGGGTGATGGAACGGTTATTGAGATTGAATGCATTGCGCAGGCCTA
GATGTCGCGCCAACTTATCTCGAGCGAGAAGTTCCCTCCTAAGCCTCACA
ACTGCCCCGCGGTCAAGGTTCCCGGACTCGTCTTCTGTGCCGGTCAGACA
GCCACTGGAGAGATCAAGCAAGCCACACGAACTGTACTCCAAAATCTTAA
GGAGGTGCTTGAGCTGTCTGGATCCTCGCTCGAGCAAGTAGTCAAGTACA
ATGTGTATCTTGCAGATATGAAGGACTTTGCTGCCATGAACGAGGTATAT
ATCGATTTCCTGCCCAAGCCAATGCCTTCTCGGTCGTGTCTGCAGGCAGT
TCCTCCGGGTGATGGAACGGTTATTGAGATTGAATGCATTGCGCAGGCCT
AGATGTCGCGCCAACTTATCTCGAGCGAGAAGTTCCCTCCTAAGCCTCAC
AACTGCCCCGCGGTCAAGGTTCCCGGACTCGTCTTCTGTGCCGGTCAGAC
AGCCACTGGAGAGATCAAGCAAGCCACACGAACTGTACTCCAAAATCTTA
AGGAGGTGCTTGAGCTGTCTGGATCCTCGCTCGAGCAAGTAGTCAAGTAC
AATGTGTATCTTGCAGATATGAAGGACTTTGCTGCCATGAACGAGGTATA
TATCGATTTCCTGCCCAAGCCAATGCCTTCTCGGTCGTGTCTGCAGGCAG
TTCCTCCGGGTGATGGAACGGTTATTGAGATTGAATGCATTGCGCAGGCC
TAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003543KJC3_003543Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003543-T1.exon1KJC3_003543-T1.exon1Aspergillus niger KJC3exon
KJC3_003543-T1.exon2KJC3_003543-T1.exon2Aspergillus niger KJC3exon
KJC3_003543-T1.exon3KJC3_003543-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003543-T1.cdsKJC3_003543-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003543-T1KJC3_003543-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR006175
DBxrefInterPro:IPR035959
DBxrefPFAM:PF01042
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2220731..2221203 +
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